BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00049832
         (362 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE93234.1| coat protein [Cycas necrotic stunt virus]             230   2e-58
ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus] gi|1...   226   2e-57
gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus]             226   3e-57
ref|NP_733975.1| capsid protein [Cycas necrotic stunt virus]          201   3e-50
emb|CAA60707.1| ORF [Artichoke italian latent virus]                   56   5e-06

>dbj|BAE93234.1| coat protein [Cycas necrotic stunt virus]
          Length = 569

 Score =  230 bits (586), Expect = 2e-58
 Identities = 109/120 (90%), Positives = 114/120 (95%)
 Frame = +1

Query: 1   AEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKS 180
           AEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKG++
Sbjct: 435 AEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRN 494

Query: 181 ISSIFCAIEVLPGFSFYGRTGSPRLCVASTTVSPISDVSASNSQSGDEDIGDQYSAALGR 360
           ISSIFCAIEVLPGFSFYGRTGSPRL VA TTV P++D S SNSQSGDEDIGDQ +AALGR
Sbjct: 495 ISSIFCAIEVLPGFSFYGRTGSPRLSVAGTTVPPVADASTSNSQSGDEDIGDQCAAALGR 554


>ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus]
            gi|124106315|sp|Q8QVU9.2|POL2_CNSV RecName: Full=RNA2
            polyprotein; AltName: Full=P2; Contains: RecName:
            Full=Protein 2A; Short=P2A; Contains: RecName:
            Full=Movement protein; AltName: Full=2B-MP; Contains:
            RecName: Full=Coat protein; AltName: Full=2C-CP
            gi|84369993|dbj|BAB89370.2| polyprotien 2 [Cycas necrotic
            stunt virus]
          Length = 1240

 Score =  226 bits (577), Expect = 2e-57
 Identities = 107/120 (89%), Positives = 111/120 (92%)
 Frame = +1

Query: 1    AEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKS 180
            AEGFGPEEENFRGHCRN SIYEG+ATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKG++
Sbjct: 1106 AEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRN 1165

Query: 181  ISSIFCAIEVLPGFSFYGRTGSPRLCVASTTVSPISDVSASNSQSGDEDIGDQYSAALGR 360
            ISSIFCAIEVLPGFSFYGRTGSPRL V  TTV P +D S SNSQ GDEDIGDQYSAALGR
Sbjct: 1166 ISSIFCAIEVLPGFSFYGRTGSPRLSVVGTTVPPTADASTSNSQGGDEDIGDQYSAALGR 1225


>gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus]
          Length = 1289

 Score =  226 bits (576), Expect = 3e-57
 Identities = 108/120 (90%), Positives = 111/120 (92%)
 Frame = +1

Query: 1    AEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKS 180
            AEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPL+KLDFKYRNWIRFTTPKGKS
Sbjct: 1155 AEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLRKLDFKYRNWIRFTTPKGKS 1214

Query: 181  ISSIFCAIEVLPGFSFYGRTGSPRLCVASTTVSPISDVSASNSQSGDEDIGDQYSAALGR 360
            ISSIFCAIEVLPGFSFYGRTGSPRL VA TTV PI D S S+ Q GDED GDQY+AALGR
Sbjct: 1215 ISSIFCAIEVLPGFSFYGRTGSPRLSVAGTTVPPIVDASTSSLQGGDEDTGDQYAAALGR 1274


>ref|NP_733975.1| capsid protein [Cycas necrotic stunt virus]
          Length = 564

 Score =  201 bits (512), Expect(2) = 3e-50
 Identities = 95/110 (86%), Positives = 99/110 (90%)
 Frame = +1

Query: 1   AEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKS 180
           AEGFGPEEENFRGHCRN SIYEG+ATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKG++
Sbjct: 423 AEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRN 482

Query: 181 ISSIFCAIEVLPGFSFYGRTGSPRLCVASTTVSPISDVSASNSQSGDEDI 330
           ISSIFCAIEVLPGFSFYGRTGSPRL V  TTV P +D S SNSQ GD  I
Sbjct: 483 ISSIFCAIEVLPGFSFYGRTGSPRLSVVGTTVPPTADASTSNSQGGDMKI 532



 Score = 23.1 bits (48), Expect(2) = 3e-50
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +2

Query: 320 MKTLEINTLLP*AG 361
           MK LEIN LLP AG
Sbjct: 530 MKILEINILLPWAG 543


>emb|CAA60707.1| ORF [Artichoke italian latent virus]
          Length = 510

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/68 (36%), Positives = 38/68 (55%)
 Frame = +1

Query: 46  RNFSIYEGKATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKSISSIFCAIEVLPGFS 225
           R   +Y+   ++P E G+FAGP        +  NW+R  +   + I ++  +IEVLPGF 
Sbjct: 438 RGILVYDNAYSIPFEFGSFAGPVISGGTPNEAENWVRVQSTSWQWIHAVTVSIEVLPGFR 497

Query: 226 FYGRTGSP 249
           FYGR+  P
Sbjct: 498 FYGRSAGP 505