BLASTX nr result

ID: Akebia23_contig00049552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00049552
         (256 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT46100.1| MADS-box protein [Akebia trifoliata]                    61   2e-07
ref|XP_006294978.1| hypothetical protein CARUB_v10024046mg [Caps...    55   1e-05

>gb|AAT46100.1| MADS-box protein [Akebia trifoliata]
          Length = 194

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/85 (44%), Positives = 45/85 (52%)
 Frame = -2

Query: 255 HLRYQAGNMAKKIEVLEASKQ*RLV*YHCTDAAIYYFCSQCHRVFI*SLKLGSIRKLLGE 76
           HL+++A NMAKKI++LEASK                                  RKLLGE
Sbjct: 52  HLKFEAANMAKKIDLLEASK----------------------------------RKLLGE 77

Query: 75  DLGSCSRDELTQMECQLEKSLRNIR 1
            LGSCS +EL QME QLE+SL NIR
Sbjct: 78  GLGSCSIEELQQMETQLERSLSNIR 102


>ref|XP_006294978.1| hypothetical protein CARUB_v10024046mg [Capsella rubella]
           gi|482563686|gb|EOA27876.1| hypothetical protein
           CARUB_v10024046mg [Capsella rubella]
          Length = 213

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/85 (42%), Positives = 43/85 (50%)
 Frame = -2

Query: 255 HLRYQAGNMAKKIEVLEASKQ*RLV*YHCTDAAIYYFCSQCHRVFI*SLKLGSIRKLLGE 76
           HL+Y+A NM KKIE LEASK                                  RKLLGE
Sbjct: 89  HLKYEAANMMKKIEQLEASK----------------------------------RKLLGE 114

Query: 75  DLGSCSRDELTQMECQLEKSLRNIR 1
            +GSCS +EL Q+E QLEKS++ IR
Sbjct: 115 GIGSCSIEELQQIEQQLEKSVKCIR 139


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