BLASTX nr result

ID: Akebia23_contig00049208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00049208
         (697 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007026456.1| Uncharacterized protein TCM_021520 [Theobrom...    56   3e-11
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    48   2e-08
ref|XP_006577697.1| PREDICTED: uncharacterized protein LOC102664...    48   3e-08
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    63   8e-08
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    44   2e-06

>ref|XP_007026456.1| Uncharacterized protein TCM_021520 [Theobroma cacao]
           gi|508715061|gb|EOY06958.1| Uncharacterized protein
           TCM_021520 [Theobroma cacao]
          Length = 754

 Score = 55.8 bits (133), Expect(2) = 3e-11
 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -1

Query: 217 ASCLIQDRRALWSELKSTLNPI-SNLLIVGDFNTVLYPDEKKGGRFPNRVSMEDLGEMIG 41
           A C   +RR LWS L+   + + +  L+ GDFN+++  DE+  G  P+  SMEDL   + 
Sbjct: 305 AKCTRLERRELWSNLRIISDSMQAPWLVGGDFNSIVSCDERLHGAIPHDGSMEDLSSTLL 364

Query: 40  ELSLLDAGFSGN 5
           +  LLDAGF GN
Sbjct: 365 DCGLLDAGFEGN 376



 Score = 38.9 bits (89), Expect(2) = 3e-11
 Identities = 25/75 (33%), Positives = 37/75 (49%)
 Frame = -3

Query: 548 INFMSAPIWNIRGIQNSSSLLRLKNLMKSINPLLLAVLEPMSRKDSNLQKMQLILRARVA 369
           ++ ++  +WN+RGI  ++   RLK L       LL VLEPM     N  ++  I R R+ 
Sbjct: 199 LSMINCLLWNVRGIAGTAVQRRLKKLKLMHKVKLLVVLEPM----VNTSRINYIKR-RLG 253

Query: 368 VSNDKDNYMGSIWVF 324
             N   N    IW+F
Sbjct: 254 FDNALSNCSHKIWLF 268


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 48.1 bits (113), Expect(2) = 2e-08
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -1

Query: 196 RRALWSELKSTLNPISNLLIVG-DFNTVLYPDEKKGGRFPNRVSMEDLGEMIGELSLLDA 20
           R  LW +L+  +  I   LI+G DFNT++  DE+ GG           G  + +L L+D 
Sbjct: 114 RSGLWEKLRDVVQAIDEPLIIGGDFNTIIRTDERIGGNGQLSPDSVAFGNWVSDLFLIDM 173

Query: 19  GFSGNK 2
           GF GN+
Sbjct: 174 GFKGNR 179



 Score = 37.4 bits (85), Expect(2) = 2e-08
 Identities = 23/97 (23%), Positives = 44/97 (45%)
 Frame = -3

Query: 539 MSAPIWNIRGIQNSSSLLRLKNLMKSINPLLLAVLEPMSRKDSNLQKMQLILRARVAVSN 360
           M+  +WN RG    +    ++ ++K  N  +LA+ E  +  D   +  Q  L    +   
Sbjct: 1   MNCLLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSCQG-LGFENSFRV 59

Query: 359 DKDNYMGSIWVFWFGDPSKFKVLHISSQYILVRSRSG 249
           D     G +W+ W  +  +  +++ SSQ+I  R  +G
Sbjct: 60  DVVGQSGGLWLLWKAEVGEVTIVNSSSQFIHARIVNG 96


>ref|XP_006577697.1| PREDICTED: uncharacterized protein LOC102664381 [Glycine max]
          Length = 515

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = -3

Query: 524 WNIRGIQNSSSLLRLKNLMKSINPLLLAVLEPMSRKDSNLQ-KMQLILRARVAVSNDKDN 348
           WNIRG+      + + + +KS+NP ++ +LE   RK+  L  + +L L  +   + DK +
Sbjct: 5   WNIRGLNKVGKTIEISSRLKSLNPTIIVLLETRVRKNKALTVRNKLNLNMKYLDNYDK-H 63

Query: 347 YMGSIWVFWFGDPSKFKVLHISSQYILV 264
             G IW  W  D SK  + HI S   L+
Sbjct: 64  ENGRIWFIW--DDSKVMIKHICSTSQLI 89



 Score = 37.0 bits (84), Expect(2) = 3e-08
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -1

Query: 205 IQDRRALWSELKST-LNPISNLLIVGDFNTVLYPDEKKGGRFPNRVSMEDLGEMIGELSL 29
           + DRR LW +++   +       ++GDFN VL  +++ GGR        DL EM+  + L
Sbjct: 113 LDDRRKLWKDIEDLRVQQADPWCLLGDFNNVLKAEDRIGGRDVIESEYVDLREMMSRVGL 172

Query: 28  LDAGFSGN 5
            +    G+
Sbjct: 173 YEMDTCGD 180


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = -1

Query: 226 ILRASCLIQDRRALWSELKSTLNPISN-LLIVGDFNTVLYPDEKKGGRFPNRVSMEDL-- 56
           ++ A+  +  R  LW ELK  +N +   LLI GDFNT+L+ DE+ GG    R+S + L  
Sbjct: 5   VVYAAPSVSRRSGLWGELKDVVNGLEGPLLIGGDFNTILWVDERMGGN--GRLSPDSLAF 62

Query: 55  GEMIGELSLLDAGFSGNK 2
           G+ I ELSL+D GF GNK
Sbjct: 63  GDWINELSLIDLGFKGNK 80


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 44.3 bits (103), Expect(2) = 2e-06
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = -1

Query: 271 FSLEAEVENQQILFCILRASCLIQDRRALWSELKSTLNPISN-LLIVGDFNTVLYPDEKK 95
           F L +++   ++L   + A  ++ +R   W +L     P     L+ GD N VL+ +EK 
Sbjct: 93  FKLRSDIP--EVLLTGMHAPSVVSERNKYWVDLTEDSPPRGTPWLVAGDMNEVLHGNEKM 150

Query: 94  GGRFPNRVSMEDLGEMIGELSLLDAGFSGNK 2
           GGR   +   +   + I   +LLD GF G K
Sbjct: 151 GGRQVGKEQGKQCKDWIAANALLDLGFQGPK 181



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = -3

Query: 539 MSAPIWNIRGIQNSSSLLRLKNLMKSINPLLLAVLEPMSRKDSNLQKMQLILRA-----R 375
           M A IWN+RG  + + L    +L+K   P LL +LE    K S+L+  Q   R      R
Sbjct: 1   MKAIIWNVRGANSKAFLWHALDLVKMHKPDLLILLE---TKCSSLRADQATKRLGYVNFR 57

Query: 374 VAVSNDKDNYMGSIWVFWFGD 312
           +  +  K    G IW+ W  D
Sbjct: 58  IIPAFGK---RGGIWLMWKAD 75


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