BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00047582
         (355 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containi...   142   5e-32
emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]   132   4e-29
gb|EMT28956.1| hypothetical protein F775_08560 [Aegilops tauschii]    114   1e-23
emb|CBI38781.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
emb|CBI19955.3| unnamed protein product [Vitis vinifera]              109   4e-22
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   109   4e-22
ref|XP_002307076.2| pentatricopeptide repeat-containing family p...   109   5e-22
ref|XP_007207635.1| hypothetical protein PRUPE_ppa021864mg [Prun...   109   5e-22
gb|EXB76266.1| hypothetical protein L484_025622 [Morus notabilis]     108   6e-22
ref|XP_004972033.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
ref|XP_004240796.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indi...   108   6e-22
gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japo...   108   6e-22
ref|XP_007038499.1| Tetratricopeptide repeat-like superfamily pr...   108   8e-22
ref|XP_007038498.1| Tetratricopeptide repeat-like superfamily pr...   108   8e-22
ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containi...   108   1e-21
ref|XP_007208480.1| hypothetical protein PRUPE_ppa018503mg [Prun...   108   1e-21
ref|NP_195454.1| pentatricopeptide repeat-containing protein [Ar...   108   1e-21

>ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  142 bits (358), Expect = 5e-32
 Identities = 65/114 (57%), Positives = 90/114 (78%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           E+AF+L ++M ++D + PD +TM+SLV ACAQLG+LE+G+ LHSYSKE+ L+ NLRV N 
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNA 253

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRL 9
           I+DMYCKC D+ESAQEVF  + ++DVL+WTSM+SG    G    AL +F++M+L
Sbjct: 254 ILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQL 307



 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 42/113 (37%), Positives = 74/113 (65%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +++A  LF+KM Q+++I  D IT++ ++SACAQ G L+QG+ +H    + ++  +L +  
Sbjct: 295 FQEALALFQKM-QLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET 353

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++DMY KCG ++ A +VF+ M  R+V TW ++I G   HG+   A+ +F +M
Sbjct: 354 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQM 406



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/111 (30%), Positives = 56/111 (50%)
 Frame = -3

Query: 347 QAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGI 168
           +A +L+  M++   +  D  T   +++ACA+LG ++ GR  H    +     +L V N +
Sbjct: 94  EAVSLYYFMVERG-VPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINAL 152

Query: 167 IDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           I  Y  CG    A +VF     RDV+TW  MI+ +++ G    A  +  EM
Sbjct: 153 IQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEM 203


>emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score =  132 bits (333), Expect = 4e-29
 Identities = 61/105 (58%), Positives = 82/105 (78%)
 Frame = -3

Query: 323 MIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCG 144
           M ++D + PD +TM+SLV ACAQLG+LE+G+LLHSYSKE+ L+ NL V N I+DMYCKC 
Sbjct: 1   MTKLDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCD 60

Query: 143 DLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRL 9
           D+ESAQEVF  + ++DVL+WTSM+SG    G    +L +FR+M+L
Sbjct: 61  DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQL 105



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 43/113 (38%), Positives = 73/113 (64%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           ++++  LF KM Q+ +I PD IT++ ++SACAQ G L+QG+ +H    + ++  +L +  
Sbjct: 93  FQESLALFRKM-QLHKIEPDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET 151

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++DMY KCG ++ A +VF+ M  R+V TW +MI G   HG+   A+ +F +M
Sbjct: 152 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQM 204


>gb|EMT28956.1| hypothetical protein F775_08560 [Aegilops tauschii]
          Length = 670

 Score =  114 bits (286), Expect = 1e-23
 Identities = 51/117 (43%), Positives = 84/117 (71%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +++A  +FE+M+  D I PD IT++SL+S+CAQLGDL++GR  H+Y K+  +  ++ + N
Sbjct: 305 HKEALRMFEEMLS-DGIVPDVITLVSLLSSCAQLGDLQKGRYFHNYIKDHGIRCDIILHN 363

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRLGD 3
            +I+MY KCGD+ +A+ VF+NM +RD ++WT+M+ GYV     + A  +F EM++ D
Sbjct: 364 SLINMYAKCGDMAAAEMVFENMTQRDTVSWTAMVCGYVKGLQFTTAFSLFEEMKVVD 420



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/113 (35%), Positives = 73/113 (64%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +  AF+LFE+M  +D ++ + + ++SL+SAC+QLG L++GR +H+Y K+  +  ++ + +
Sbjct: 406 FTTAFSLFEEMKVVDVVSSE-MALVSLLSACSQLGALDKGREIHTYIKDKSVITDVWLES 464

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++DMY KCG  ++A ++F  M  +  LTW +MI G   +G    A+  F +M
Sbjct: 465 ALVDMYAKCGCTDTAAQIFSTMQHKRTLTWNAMIGGLASNGQGKEAVEHFEQM 517



 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 42/113 (37%), Positives = 70/113 (61%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +++A  L  +M Q     P+ +T+ISL+SAC Q  D+++GR +++   E  +E +L V N
Sbjct: 204 WDEALRLLAEM-QSHGTKPNKVTVISLLSACGQEQDVDRGRWVYARIDEYGIEADLDVRN 262

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++ MY KC  +  A + F+ MP R+  +W ++I G+V +G H  ALR+F EM
Sbjct: 263 ALLSMYVKCRCMSDALKTFQLMPIRNTKSWNTLIDGFVQNGKHKEALRMFEEM 315



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
 Frame = -3

Query: 344 AFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQ---GRLLHSYSKEIDLEMNLRVGN 174
           A  LF  M++   ++PD  TM ++VS+ A     +    G  +HS  ++     ++ V +
Sbjct: 103 ALALFRAMLRRG-VSPDNYTMAAVVSSSAAFAGWKSRSTGDAVHSLVRKTGFASDVFVMS 161

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
           G+++ Y     ++ A++VF+ M  RDV++WT MIS          ALR+  EM+
Sbjct: 162 GLVNFYGSFRSVDDARKVFEEMADRDVVSWTLMISASAQCSQWDEALRLLAEMQ 215


>emb|CBI38781.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/115 (45%), Positives = 81/115 (70%), Gaps = 3/115 (2%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEID---LEMNLRV 180
           E+AF+L ++M ++D + PD +TM+SLV ACAQLG+LE+G+ LHSYSKE+D   +  +L +
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVL 253

Query: 179 GNGIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
              ++DMY KCG ++ A +VF+ M  R+V TW ++I G   HG+   A+ +F +M
Sbjct: 254 ETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQM 308



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/111 (30%), Positives = 56/111 (50%)
 Frame = -3

Query: 347 QAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGI 168
           +A +L+  M++   +  D  T   +++ACA+LG ++ GR  H    +     +L V N +
Sbjct: 94  EAVSLYYFMVERG-VPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINAL 152

Query: 167 IDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           I  Y  CG    A +VF     RDV+TW  MI+ +++ G    A  +  EM
Sbjct: 153 IQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEM 203


>ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  111 bits (277), Expect = 1e-22
 Identities = 48/117 (41%), Positives = 84/117 (71%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +++A  +FE+M+  D + PD IT++S++S  AQLGDL+QGR LH+Y K+ ++  ++ + N
Sbjct: 305 HKEALTMFEEMLS-DGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQN 363

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRLGD 3
            +I+MY KCGD+ +A+ +F+NM +RD+++WT+M+ GYV       A  +F +M++ D
Sbjct: 364 SLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRD 420



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 41/113 (36%), Positives = 70/113 (61%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +  AFNLF+ M   D +  + + ++SL+SAC+QLG L++GR +HSY KE  +  ++ + +
Sbjct: 406 FRTAFNLFDDMKVRDVMASE-MALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLES 464

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++DMY KCG +++A E+F  M  +  L W +MI G    G    A+ +F ++
Sbjct: 465 ALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQL 517



 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 38/102 (37%), Positives = 64/102 (62%)
 Frame = -3

Query: 320 IQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGD 141
           +Q +   P+ IT+ISL+SAC Q+  +++G  +++   E  +E ++ + N +I MY KCG 
Sbjct: 214 MQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGC 273

Query: 140 LESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           +  A + FK MP R+  +W ++I G+V +G H  AL +F EM
Sbjct: 274 MSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEM 315



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = -3

Query: 344 AFNLFEKMIQMDEITPDCITMISLVSACAQLGDLE---QGRLLHSYSKEIDLEMNLRVGN 174
           A  LF  M +   ++PD  TM ++  + A     +    G  +H+  + I    +L V +
Sbjct: 103 ALELFRAM-RRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMS 161

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
           G+I+ Y     +E A++VF+ M +RDV++WT MIS +   G     LR   EM+
Sbjct: 162 GLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQ 215


>ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 658

 Score =  109 bits (273), Expect = 4e-22
 Identities = 51/115 (44%), Positives = 80/115 (69%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           ++QA  +F  M+   E  PD  T+IS++SACA LG LE G+ ++SY K+  L +++ +GN
Sbjct: 281 FDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGN 340

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRL 9
            +IDM+ KCGD+E+A+EVF +M KR ++TWT+M+SG   +G    A+ +F +M L
Sbjct: 341 ALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCL 395



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/112 (32%), Positives = 62/112 (55%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           + A  L +KM + +      +T  S+V   ++ G++E   L HS  +++ L   +   N 
Sbjct: 158 QSAIGLLDKMPERN-----IVTWNSVVCGLSKAGNME---LAHSVFEQMPLRNEVS-WNS 208

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           +I  Y + GD+ +AQ +F  MP++ V++WT+MISGY  +G+   A  IF  M
Sbjct: 209 MISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHM 260



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +++A  ++ +M  +  +  +  T   L+        LE GR++H    ++    ++ V N
Sbjct: 55  HKEALRVYSRMKAL-MVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQN 113

Query: 173 GIIDMYCKCGD-LESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++  Y  C + L SA  VF+ MP+RDV++W SMIS Y+  G    A+ +  +M
Sbjct: 114 SLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKM 167



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/112 (29%), Positives = 60/112 (53%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           E A ++FE+M   +E++ +     S++S   ++GD+   + +     E      +     
Sbjct: 189 ELAHSVFEQMPLRNEVSWN-----SMISGYVRIGDVRAAQSIFYQMPE----KTVVSWTA 239

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           +I  Y   GDL+SA+ +F +MP ++V++W +MISGYV +     AL +F  M
Sbjct: 240 MISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHM 291


>emb|CBI19955.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  109 bits (273), Expect = 4e-22
 Identities = 51/115 (44%), Positives = 80/115 (69%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           ++QA  +F  M+   E  PD  T+IS++SACA LG LE G+ ++SY K+  L +++ +GN
Sbjct: 217 FDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGN 276

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRL 9
            +IDM+ KCGD+E+A+EVF +M KR ++TWT+M+SG   +G    A+ +F +M L
Sbjct: 277 ALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCL 331



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/112 (32%), Positives = 62/112 (55%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           + A  L +KM + +      +T  S+V   ++ G++E   L HS  +++ L   +   N 
Sbjct: 94  QSAIGLLDKMPERN-----IVTWNSVVCGLSKAGNME---LAHSVFEQMPLRNEVS-WNS 144

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           +I  Y + GD+ +AQ +F  MP++ V++WT+MISGY  +G+   A  IF  M
Sbjct: 145 MISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHM 196



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = -3

Query: 245 LEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGD-LESAQEVFKNMPKRDVLTWTSMIS 69
           LE GR++H    ++    ++ V N ++  Y  C + L SA  VF+ MP+RDV++W SMIS
Sbjct: 26  LEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMIS 85

Query: 68  GYVDHGNHSMALRIFREM 15
            Y+  G    A+ +  +M
Sbjct: 86  AYMTRGEIQSAIGLLDKM 103



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/112 (29%), Positives = 60/112 (53%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           E A ++FE+M   +E++ +     S++S   ++GD+   + +     E      +     
Sbjct: 125 ELAHSVFEQMPLRNEVSWN-----SMISGYVRIGDVRAAQSIFYQMPE----KTVVSWTA 175

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           +I  Y   GDL+SA+ +F +MP ++V++W +MISGYV +     AL +F  M
Sbjct: 176 MISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHM 227


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  109 bits (273), Expect = 4e-22
 Identities = 49/113 (43%), Positives = 78/113 (69%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           ++A  LF++M+Q   + PD ITM+S++SAC+ +G L Q   +H+Y         L V N 
Sbjct: 336 QEALKLFDEMLQKRSV-PDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNA 394

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
           +IDMY KCG+L  A+EVF+NMP+++V++W+SMI+ +  HGN   A+++FR M+
Sbjct: 395 LIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMK 447



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/113 (30%), Positives = 63/113 (55%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           Y+ A  LFE M   D + PD + + +++SAC   G+L  GR +H + K+    ++  +  
Sbjct: 203 YDDALRLFEDMRSSD-MKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQT 261

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            +I+MY  CG ++ A++++  +  + ++  T+M+SGY   G    A  IF +M
Sbjct: 262 ALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/116 (25%), Positives = 56/116 (48%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           E+   L+  +  ++    D  +  SL+ A +++     G  +H  + ++    +  +  G
Sbjct: 102 EKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTG 161

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRLGD 3
           +I MY  C  +  A+ +F  M   D + W  +I GY  +G++  ALR+F +MR  D
Sbjct: 162 LIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSD 217


>ref|XP_002307076.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550338333|gb|EEE94072.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 744

 Score =  109 bits (272), Expect = 5e-22
 Identities = 46/113 (40%), Positives = 80/113 (70%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           Y +A  LF++MI  +++ P+  T++ ++SAC  L  LE+G+++H Y KE   E+N+ +G 
Sbjct: 483 YAEAITLFDEMIS-EKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGT 541

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++DMY KCG LE ++E+F +M ++DV++W  MISGY  HG+ + A+ +F++M
Sbjct: 542 ALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQM 594



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
 Frame = -3

Query: 341 FNLFEKMIQM--DEITPDCITMISLVSACAQLGDLEQGRLLHSY-SKEIDLEMNLRVGNG 171
           F  F+  IQM  D   P+  T+  +V+ CA+L  LE+G+ +H   SK      N  VG+ 
Sbjct: 113 FKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSS 172

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
            + MY KCG +E A  +F  +  RDV++WT+++ GYV + +    L    EMR
Sbjct: 173 FVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMR 225



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 31/90 (34%), Positives = 59/90 (65%)
 Frame = -3

Query: 284 MISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGDLESAQEVFKNMP 105
           ++S++S+C++LG +   R +H Y  +  ++ ++ + N +IDMY K G+L  A ++F    
Sbjct: 405 LVSVISSCSKLGLINLCRSVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCR-T 463

Query: 104 KRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           +RDV+TW ++IS Y   G+++ A+ +F EM
Sbjct: 464 QRDVVTWNTLISSYTHSGHYAEAITLFDEM 493



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/88 (32%), Positives = 47/88 (53%)
 Frame = -3

Query: 266 ACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGDLESAQEVFKNMPKRDVLT 87
           AC  LG +  GR LH  + +  L  +  V + ++ MY KCG++E A   F  +  +DV +
Sbjct: 245 ACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFS 304

Query: 86  WTSMISGYVDHGNHSMALRIFREMRLGD 3
           WTS+I      G  +  L +F +M++ D
Sbjct: 305 WTSVIGVCARFGFMNECLNLFWDMQVDD 332


>ref|XP_007207635.1| hypothetical protein PRUPE_ppa021864mg [Prunus persica]
           gi|462403277|gb|EMJ08834.1| hypothetical protein
           PRUPE_ppa021864mg [Prunus persica]
          Length = 748

 Score =  109 bits (272), Expect = 5e-22
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -3

Query: 347 QAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGI 168
           +A  LFEKMI ++   P+  T+++++SAC+ L  L +G  +HS+ KE  LE+NL +   +
Sbjct: 489 EAIALFEKMIAVN-FKPNSATLVTVLSACSHLASLGEGEKIHSHIKERRLEINLSLATAL 547

Query: 167 IDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           +DMY KCG LE ++E+F +M +RDV++W  MISGY  HG+   AL IFR+M
Sbjct: 548 VDMYAKCGQLEKSRELFDSMEERDVISWNVMISGYATHGHAEPALEIFRKM 598



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = -3

Query: 293 CITMI-SLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGDLESAQEVF 117
           C TMI         LG +  GR LH Y  ++ ++ N+ V N ++DMY K G L+ A+ +F
Sbjct: 405 CNTMICGYAKMGLHLGAIHLGRSLHCYLIKVSMDENISVANSLLDMYGKSGHLKIARRIF 464

Query: 116 KNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
               +RD++TW +MIS Y   G+ + A+ +F +M
Sbjct: 465 SG-TQRDIITWNTMISSYTHAGHSAEAIALFEKM 497



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDL-EMNLRVG 177
           Y +A + F +M  +    P   T+  +V++CA+L  LE G  +H  + ++ L   N  VG
Sbjct: 111 YSKALDFFFQMRALG-FAPTQFTLPMVVASCAELMLLEHGNNVHGLALKLGLFSGNSAVG 169

Query: 176 NGIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           +  + MY KCG +E A  +F+    RDV+ WT++I GYV +      L    EM
Sbjct: 170 SSFVYMYSKCGRMEDAYFMFEETTVRDVVCWTALIIGYVQNDEIEKGLECLCEM 223


>gb|EXB76266.1| hypothetical protein L484_025622 [Morus notabilis]
          Length = 568

 Score =  108 bits (271), Expect = 6e-22
 Identities = 53/115 (46%), Positives = 79/115 (68%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           Y++AF LF +M Q+     D +TMISL+ AC+ LG LE G+ LH+Y K+  +E++  +G 
Sbjct: 293 YKEAFLLFREM-QLKGEKGDKVTMISLLLACSHLGALELGKWLHAYIKKEKIEVDATLGT 351

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRL 9
            ++DMY KCG +ESA  VF+ +P++DV+TWT++I+G    G   MAL  F EMR+
Sbjct: 352 TLVDMYAKCGGIESAINVFQQLPEKDVMTWTALITGLTMCGEEEMALEYFHEMRI 406



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/113 (29%), Positives = 72/113 (63%)
 Frame = -3

Query: 347 QAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGI 168
           +AF LF++M+  + + P+ +T++++++A A+  DLE  + +H+Y  E     + ++   +
Sbjct: 194 EAFELFDRMMS-ENVKPNEVTLVNVLNARAKARDLETAKHMHNYVDESGFGCHAKLNTAL 252

Query: 167 IDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRL 9
           +D+YCKC  +  A+++F  MP++ +     +I+G+V+  ++  A  +FREM+L
Sbjct: 253 MDVYCKCVSVLLARDLFDKMPEKYLFCLNVVINGHVNDSDYKEAFLLFREMQL 305



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/107 (30%), Positives = 55/107 (51%)
 Frame = -3

Query: 335 LFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMY 156
           LF + +  +    D  T  SL   C    DL +G+ L+++S ++    N  V N +++MY
Sbjct: 99  LFYREMIFNGFEADRFTFPSLFKYCE---DLHEGKQLYNHSIKLGFASNSYVQNTLMNMY 155

Query: 155 CKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
             CG L SA++ FK + +R V++W +MI  Y      + A  +F  M
Sbjct: 156 SNCGCLVSARKKFKKIAERTVVSWATMIGAYAQWNQPTEAFELFDRM 202


>ref|XP_004972033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Setaria italica]
          Length = 672

 Score =  108 bits (271), Expect = 6e-22
 Identities = 50/114 (43%), Positives = 78/114 (68%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +++A  +FE+M+  D   PD +T++S++SAC QLGDL+QGR LHSY K   +  +  + N
Sbjct: 307 HKEALTMFEEMLSND-FNPDAVTLVSVLSACTQLGDLQQGRNLHSYIKSRRISCDTILTN 365

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
            +I+MY KCGD+ +A+ VF+ M +RDV++WT+M+ GYV     + A   F EM+
Sbjct: 366 SLINMYAKCGDMVAAEVVFQAMKQRDVVSWTTMVCGYVQGRQFTAAFIFFEEMK 419



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 41/110 (37%), Positives = 65/110 (59%)
 Frame = -3

Query: 332 FEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMYC 153
           F   +Q D I P+ +T+ISL+SAC     +++G+ ++    E  +E ++ +GN +I MY 
Sbjct: 212 FLSQMQADGIFPNKVTIISLLSACGHGQAVDRGQWVYDQLSEYGIEADVDIGNALISMYM 271

Query: 152 KCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRLGD 3
           KCG +  A E FK MP R+  +W ++I G+V +  H  AL +F EM   D
Sbjct: 272 KCGCMSDALEAFKVMPSRNTKSWNTLIDGFVQNQKHKEALTMFEEMLSND 321



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 41/118 (34%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +  AF  FE+M     +  + + ++SL+SAC+QLG L++GR +H+Y +E +++ ++ + +
Sbjct: 408 FTAAFIFFEEMKAAGIVASE-MALVSLLSACSQLGALDKGREIHAYIEEKNIKRDVFLES 466

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIF-REMRLGD 3
            ++DMY KCG +  A E+F  M  +  LTW SMI G   +G+   A+++F + ++ GD
Sbjct: 467 ALVDMYAKCGCINMAAEIFSKMQYKQTLTWNSMIGGLASNGHGKEAVQLFDQRLKFGD 524



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
 Frame = -3

Query: 305 ITPDCITMISLVSACAQLGD------LEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCG 144
           + PD  TM + V+A A  GD         G  +H+  ++I    +L V +G++++Y    
Sbjct: 115 VVPDSYTMAAAVTASAA-GDGWKWEWRATGDAVHAMVRKIGCAADLYVMSGLVNLYGTFR 173

Query: 143 DLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
             E A++VF+ M +RDV++WTSMIS +   G    ALR   +M+
Sbjct: 174 SAEDARKVFEEMRERDVVSWTSMISAFAQRGMWDDALRFLSQMQ 217


>ref|XP_004240796.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Solanum lycopersicum]
          Length = 597

 Score =  108 bits (271), Expect = 6e-22
 Identities = 48/113 (42%), Positives = 80/113 (70%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +  A  LF++M+ + ++ PD +T+ S++SACA LG  + G+ +H Y  + D++M++ VGN
Sbjct: 327 FSDAIALFQEMMAI-KVKPDEVTVASVLSACAHLGIFDVGKAVHEYVHQHDIKMDIYVGN 385

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++DMYCKCG + +A EVF +M K+D ++WTSMISG   +G H  A+++F +M
Sbjct: 386 ALVDMYCKCGSVNTALEVFLSMSKKDTVSWTSMISGLAVNGFHDNAIQLFSQM 438



 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 31/144 (21%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           Y +   LF  M Q + +  D +T++ +V AC+ LGD +    +  Y ++  + +++ +GN
Sbjct: 195 YHEVLGLFASM-QAENVKADAVTLVKVVLACSYLGDFDTADFVAKYIRDSCVRIDVYLGN 253

Query: 173 GIIDMY-------------------------------CKCGDLESAQEVFKNMPKRDVLT 87
            +IDMY                                K GDL +A+++F  MP RDV++
Sbjct: 254 TLIDMYGRRGLVILADEVFTKMKEKNVVSWNAMIMGYAKAGDLMAARKLFDKMPNRDVIS 313

Query: 86  WTSMISGYVDHGNHSMALRIFREM 15
           WTSMI+GY      S A+ +F+EM
Sbjct: 314 WTSMITGYCQANRFSDAIALFQEM 337



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/112 (31%), Positives = 59/112 (52%)
 Frame = -3

Query: 347 QAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGI 168
           +A +++ +M Q      + +T I +  AC QL D+  G+ +H    ++  +  L V N +
Sbjct: 96  EALHMYVRMRQQG-FPGNNLTFIFIFKACVQLSDIVLGQAVHVNVLKLGYQSYLYVCNAL 154

Query: 167 IDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
           I  Y  CGDL  A +VF  M +RD+++W S+I GY     +   L +F  M+
Sbjct: 155 IYTYGSCGDLVGAGKVFDRMSERDLVSWNSLICGYSQCYKYHEVLGLFASMQ 206


>gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  108 bits (271), Expect = 6e-22
 Identities = 49/117 (41%), Positives = 83/117 (70%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +++A  +FE+M+ +  +TPD IT++S++SACAQLG+L +G  +HSY K+  +  +  + N
Sbjct: 304 HKEALRIFEEML-LHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTN 362

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRLGD 3
            +I+MY KCGD+ +A+ VF+ M K+DV++WT M+ GYV     +MA  +F EM++ +
Sbjct: 363 SLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAE 419



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 43/113 (38%), Positives = 77/113 (68%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +  AFNLFE+M ++ E+    + ++SL+SAC+QLG L++GR +HSY +E+++  +L + +
Sbjct: 405 FTMAFNLFEEM-KIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLES 463

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++DMY KCG +++A E+F+ M  +  L+W +MI G   +G    A+ +F +M
Sbjct: 464 ALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQM 516



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 41/104 (39%), Positives = 65/104 (62%)
 Frame = -3

Query: 320 IQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGD 141
           +Q + I P+ +T+ISL+SAC Q   +++GR +++   +  +E ++ + N +I MY KCG 
Sbjct: 213 MQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGC 272

Query: 140 LESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRL 9
           L  A E F+ MP R   +W ++I G+V +  H  ALRIF EM L
Sbjct: 273 LSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLL 316



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = -3

Query: 305 ITPDCITMISLVSACAQLGDLE---QGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGDLE 135
           ++PD  TM ++VSA A    L+    G  +H+  + I    ++ V +G+++ Y     ++
Sbjct: 114 VSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVK 173

Query: 134 SAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
            A +VF+ M +RDV++WTSMIS     G+    L++  EM+
Sbjct: 174 EASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQ 214


>gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  108 bits (271), Expect = 6e-22
 Identities = 49/117 (41%), Positives = 83/117 (70%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +++A  +FE+M+ +  +TPD IT++S++SACAQLG+L +G  +HSY K+  +  +  + N
Sbjct: 304 HKEALRIFEEML-LHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTN 362

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRLGD 3
            +I+MY KCGD+ +A+ VF+ M K+DV++WT M+ GYV     +MA  +F EM++ +
Sbjct: 363 SLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAE 419



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 43/113 (38%), Positives = 77/113 (68%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           +  AFNLFE+M ++ E+    + ++SL+SAC+QLG L++GR +HSY +E+++  +L + +
Sbjct: 405 FTMAFNLFEEM-KIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLES 463

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            ++DMY KCG +++A E+F+ M  +  L+W +MI G   +G    A+ +F +M
Sbjct: 464 ALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQM 516



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 41/104 (39%), Positives = 65/104 (62%)
 Frame = -3

Query: 320 IQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGD 141
           +Q + I P+ +T+ISL+SAC Q   +++GR +++   +  +E ++ + N +I MY KCG 
Sbjct: 213 MQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGC 272

Query: 140 LESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRL 9
           L  A E F+ MP R   +W ++I G+V +  H  ALRIF EM L
Sbjct: 273 LSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLL 316



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = -3

Query: 305 ITPDCITMISLVSACAQLGDLE---QGRLLHSYSKEIDLEMNLRVGNGIIDMYCKCGDLE 135
           ++PD  TM ++VSA A    L+    G  +H+  + I    ++ V +G+++ Y     +E
Sbjct: 114 VSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVE 173

Query: 134 SAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
            A +VF+ M +RDV++WTSMIS     G+    L++  EM+
Sbjct: 174 EASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQ 214


>ref|XP_007038499.1| Tetratricopeptide repeat-like superfamily protein isoform 2
           [Theobroma cacao] gi|590672049|ref|XP_007038500.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 2 [Theobroma cacao] gi|508775744|gb|EOY23000.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 2 [Theobroma cacao] gi|508775745|gb|EOY23001.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 370

 Score =  108 bits (270), Expect = 8e-22
 Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
 Frame = -3

Query: 350 EQAFNLFEKM--IQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVG 177
           ++A  LF +M  +  D + PD ITM S++SACA LG ++ G+ +HSY +   +E +L VG
Sbjct: 54  KEALQLFHEMQNLSNDNVKPDKITMASVLSACAYLGAIDHGKWIHSYLRRSGVECDLVVG 113

Query: 176 NGIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
             +IDMY KCG +E A EVFK MP+RD L WT+MIS +  HG    A   F EM
Sbjct: 114 TALIDMYGKCGSVERAYEVFKEMPRRDTLAWTAMISAFALHGYSKEAFDTFVEM 167


>ref|XP_007038498.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|508775743|gb|EOY22999.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 467

 Score =  108 bits (270), Expect = 8e-22
 Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
 Frame = -3

Query: 350 EQAFNLFEKM--IQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVG 177
           ++A  LF +M  +  D + PD ITM S++SACA LG ++ G+ +HSY +   +E +L VG
Sbjct: 151 KEALQLFHEMQNLSNDNVKPDKITMASVLSACAYLGAIDHGKWIHSYLRRSGVECDLVVG 210

Query: 176 NGIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
             +IDMY KCG +E A EVFK MP+RD L WT+MIS +  HG    A   F EM
Sbjct: 211 TALIDMYGKCGSVERAYEVFKEMPRRDTLAWTAMISAFALHGYSKEAFDTFVEM 264



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 39/107 (36%), Positives = 64/107 (59%)
 Frame = -3

Query: 335 LFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGIIDMY 156
           LF++M+  + I+PDC+T   L+  C +  D   G  +H  + +     +L V N +++ Y
Sbjct: 24  LFKQML-FNGISPDCLTFPFLLKECTRRFDSRVGCSIHGKTIKFGWFRDLYVQNSLVNFY 82

Query: 155 CKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
             CG L SA+++F  M  RDV++W SMI G++  GN  MAL++FR +
Sbjct: 83  SACGFLNSARKLFDEMLNRDVVSWNSMIIGHLRAGNLDMALKLFRSI 129


>ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Fragaria vesca subsp. vesca]
          Length = 736

 Score =  108 bits (269), Expect = 1e-21
 Identities = 50/115 (43%), Positives = 78/115 (67%)
 Frame = -3

Query: 347 QAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGI 168
           +A  LF +M ++  + PD +TM+S++SAC+ LG L+Q + +HSY         L + N +
Sbjct: 347 EALRLFSEM-EVSGLRPDPVTMLSVISACSHLGALDQAKWVHSYVDTNGFSGALSINNAL 405

Query: 167 IDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRLGD 3
           IDMY KCG LE A++VF+ MP+R+V++WT+MIS +  HG+ S AL  F +M+L +
Sbjct: 406 IDMYAKCGSLERARQVFEKMPRRNVISWTTMISAFAMHGDASNALSFFSQMKLAN 460



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/113 (29%), Positives = 67/113 (59%)
 Frame = -3

Query: 353 YEQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGN 174
           Y+ AF+LFE+M   D + PD + + +++SAC + G L  G+ +H + ++ ++ ++  + +
Sbjct: 213 YDIAFHLFEEMKNTD-VKPDQMILSAMLSACGRAGKLSYGKAIHDFIEDNNIVVDSHILS 271

Query: 173 GIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
            +I +Y   G ++ AQ++F     R+ +  T+M+SGY   G    A +IF ++
Sbjct: 272 ALIAVYAGSGSMDLAQKLFDKTSVRNFVVATAMVSGYSKVGRVEDARKIFDQI 324



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/116 (29%), Positives = 63/116 (54%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           E+A  ++E M + + +  D  +   L+ A ++   L +G  +H  + ++  + +  V   
Sbjct: 113 EKALLVYETM-RREGVALDRFSFPPLLKAVSRAVVLAEGLEIHGLACKLGYDSDPFVQTV 171

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMRLGD 3
           ++ MY  CG +  A++VF  MP RDV+ W+ MI GY   G++ +A  +F EM+  D
Sbjct: 172 LVRMYAACGRVMDARQVFDKMPSRDVVAWSIMIDGYCQSGHYDIAFHLFEEMKNTD 227


>ref|XP_007208480.1| hypothetical protein PRUPE_ppa018503mg [Prunus persica]
           gi|462404122|gb|EMJ09679.1| hypothetical protein
           PRUPE_ppa018503mg [Prunus persica]
          Length = 509

 Score =  108 bits (269), Expect = 1e-21
 Identities = 45/111 (40%), Positives = 76/111 (68%)
 Frame = -3

Query: 347 QAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGI 168
           +A  LF+KM+ + E++P+  T++S +SACA LG L+QG+ +H+Y+ +I  ++++ +G  +
Sbjct: 215 EALGLFQKMMTISEVSPNEATLVSSLSACAHLGALDQGKWIHAYADKIGAKISVTLGTAL 274

Query: 167 IDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           IDMY KCG +E   EVFK MP++D++ W  +ISG+  HG       +F +M
Sbjct: 275 IDMYAKCGSIEHGYEVFKKMPQKDLVAWGVIISGFAIHGQAEKCFELFDDM 325



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 32/139 (23%)
 Frame = -3

Query: 335 LFEKMIQMDEITPDCITMISLVSACAQLGDLEQGR--------------------LLHSY 216
           L+ K++ +D + PD  T   ++ AC+QL  + +GR                    L+H Y
Sbjct: 86  LYNKLV-LDGLKPDSYTYAFVLKACSQLSAIFEGRQVHCRIVKAGTAMDTHVHSSLIHMY 144

Query: 215 SKEIDL------------EMNLRVGNGIIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMI 72
           S   D             E N    N +I  Y   G++E A+E+F NM ++D  +W++MI
Sbjct: 145 SSSTDSLVCAEQVLAGFPEENTIAKNSLISGYLSQGEVEKAREMFDNMVQKDDASWSAMI 204

Query: 71  SGYVDHGNHSMALRIFREM 15
           +GY  +G  + AL +F++M
Sbjct: 205 AGYTKNGMSAEALGLFQKM 223


>ref|NP_195454.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
           gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis
           thaliana] gi|7270720|emb|CAB80403.1| putative protein
           [Arabidopsis thaliana] gi|332661386|gb|AEE86786.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 632

 Score =  108 bits (269), Expect = 1e-21
 Identities = 49/111 (44%), Positives = 75/111 (67%)
 Frame = -3

Query: 344 AFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNGII 165
           A  LF+K++   +  PD IT+++ +SAC+Q+G LE GR +H + K   + +N++V  G+I
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLI 301

Query: 164 DMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREMR 12
           DMY KCG LE A  VF + P++D++ W +MI+GY  HG    ALR+F EM+
Sbjct: 302 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/112 (34%), Positives = 68/112 (60%)
 Frame = -3

Query: 350 EQAFNLFEKMIQMDEITPDCITMISLVSACAQLGDLEQGRLLHSYSKEIDLEMNLRVGNG 171
           +QAF L+ +++   EI P+  T  SL+ +C+     + G+L+H++  +  L ++  V  G
Sbjct: 112 DQAFLLYVQLLS-SEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATG 166

Query: 170 IIDMYCKCGDLESAQEVFKNMPKRDVLTWTSMISGYVDHGNHSMALRIFREM 15
           ++D+Y K GD+ SAQ+VF  MP+R +++ T+MI+ Y   GN   A  +F  M
Sbjct: 167 LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM 218