BLASTX nr result

ID: Akebia23_contig00041616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00041616
         (227 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                65   1e-08
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    64   3e-08

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = -1

Query: 227 TREGKKDVYKLTRKMSNKLMLVRESKTKCLDIFRCIKDEDERVLARE--WRERWRGYFQE 54
           T+EG+ D+YKL R         RE KT+ L+  RCIKDED +VLA E   ++RWRGYF  
Sbjct: 479 TKEGELDIYKLAR--------AREKKTRDLNQVRCIKDEDGKVLATENAVKDRWRGYFHN 530

Query: 53  LPNEHHESDLGL 18
           L NE HE    L
Sbjct: 531 LFNEGHERSASL 542


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = -1

Query: 227 TREGKKDVYKLTRKMSNKLMLVRESKTKCLDIFRCIKDEDERVLARE--WRERWRGYFQE 54
           T+EG+ D+YKL R         RE KT+ L+  RCIKDED +VLA E   +++WRGYF  
Sbjct: 83  TKEGELDIYKLAR--------AREKKTRDLNQVRCIKDEDGKVLATENAVKDKWRGYFHN 134

Query: 53  LPNEHHESDLGL 18
           L NE HE    L
Sbjct: 135 LFNEGHERSASL 146


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