BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00041186
         (498 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...    80   3e-13
ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
ref|XP_004247664.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_006360814.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...    57   3e-06
gb|EXB63462.1| hypothetical protein L484_005425 [Morus notabilis]      55   8e-06

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/57 (64%), Positives = 48/57 (84%)
 Frame = +1

Query: 328 ALSSNLDYSLSLFSQISSHETHICNRVLREISRSIEPEKTLLLYQKMRIEGIRFDRF 498
           ALSS+LDY+LS+F+ I   ETH+CNR LRE+SRS EPEKTLL+Y++MR +G+  DRF
Sbjct: 67  ALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRF 123


>ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Fragaria vesca subsp. vesca]
          Length = 736

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = +1

Query: 325 FALSSNLDYSLSLFSQISSHETHICNRVLREISRSIEPEKTLLLYQKMRIEGIRFDRF 498
           F LS +L Y LSLF QI   +TH+CN++LRE+SR  EPEK LL+Y+ MR EG+  DRF
Sbjct: 75  FPLSPSLHYPLSLFHQIPKPQTHLCNKLLRELSRCREPEKALLVYETMRREGVALDRF 132


>ref|XP_004247664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Solanum lycopersicum]
          Length = 722

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/88 (36%), Positives = 43/88 (48%)
 Frame = +1

Query: 235 QLKQIHAQXXXXXXXXXXXXXXXXXXXXXXFALSSNLDYSLSLFSQISSHETHICNRVLR 414
           QLKQ+H Q                        L S+L YSLS+FS + +  TH+ N++ R
Sbjct: 35  QLKQVHTQILRQNLSDSDSGSLLFDLILSSIPLPSSLQYSLSIFSTLQNPRTHLINKLFR 94

Query: 415 EISRSIEPEKTLLLYQKMRIEGIRFDRF 498
           E+SRS EP   LL  +  R  G+  DRF
Sbjct: 95  ELSRSKEPHNALLFLENGRRNGLEVDRF 122


>ref|XP_006360814.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Solanum tuberosum]
          Length = 723

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/88 (36%), Positives = 43/88 (48%)
 Frame = +1

Query: 235 QLKQIHAQXXXXXXXXXXXXXXXXXXXXXXFALSSNLDYSLSLFSQISSHETHICNRVLR 414
           QLKQ+H Q                        L S+L YSLS+FS + +  TH+ N++ R
Sbjct: 35  QLKQVHTQILRQNLSDSDSDSLLFNLILSSIPLPSSLHYSLSIFSTLQNPRTHLINKLFR 94

Query: 415 EISRSIEPEKTLLLYQKMRIEGIRFDRF 498
           E+SRS EP   LL  +  R  G+  DRF
Sbjct: 95  ELSRSKEPHNALLFLENGRRNGLEVDRF 122


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/91 (40%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
 Frame = +1

Query: 238 LKQIHAQXXXXXXXXXXXXXXXXXXXXXXFALSSN---LDYSLSLFSQISSHETHICNRV 408
           LKQIHAQ                        LSS+   L Y+LS+FSQI +  TH  N++
Sbjct: 32  LKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQL 91

Query: 409 LREISRSIEPEKTLLLYQKMR-IEGIRFDRF 498
           LR +SRS  PEKT+ LY  +R I     DRF
Sbjct: 92  LRHLSRSSFPEKTIFLYHNLRAINAFALDRF 122


>gb|EXB63462.1| hypothetical protein L484_005425 [Morus notabilis]
          Length = 728

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/87 (35%), Positives = 45/87 (51%)
 Frame = +1

Query: 238 LKQIHAQXXXXXXXXXXXXXXXXXXXXXXFALSSNLDYSLSLFSQISSHETHICNRVLRE 417
           LKQ HAQ                           +LDY+LS+F++I   E  + N++LRE
Sbjct: 38  LKQFHAQILRSKLDHPNSLLLLKLALASCVLSPPSLDYALSVFARIPDPEPRLSNKLLRE 97

Query: 418 ISRSIEPEKTLLLYQKMRIEGIRFDRF 498
           +SR  + +KTLL+Y +MR EG   DR+
Sbjct: 98  VSRRGDADKTLLVYGRMRREGSSVDRY 124