BLASTX nr result

ID: Akebia23_contig00038116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00038116
         (368 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006855408.1| hypothetical protein AMTR_s00057p00152610 [A...    67   3e-09
ref|XP_002314403.2| hypothetical protein POPTR_0010s03250g [Popu...    61   1e-07

>ref|XP_006855408.1| hypothetical protein AMTR_s00057p00152610 [Amborella trichopoda]
           gi|548859174|gb|ERN16875.1| hypothetical protein
           AMTR_s00057p00152610 [Amborella trichopoda]
          Length = 446

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/75 (45%), Positives = 42/75 (56%), Gaps = 12/75 (16%)
 Frame = +3

Query: 6   DAYVLPAVRKPDHILAQSLELCLENSGGYPLA------------KNFSKPALSVDTASMG 149
           D    P  RKPD +LAQS ELCL  SGGY                +F++PA+SVD   MG
Sbjct: 353 DLCAFPVTRKPDQLLAQSSELCLGLSGGYSSVMGAFPGQLQDNNNDFARPAMSVDANPMG 412

Query: 150 VMRNKYLQTAYLFPG 194
           +MR +Y+ T Y FPG
Sbjct: 413 IMRTRYISTPYSFPG 427


>ref|XP_002314403.2| hypothetical protein POPTR_0010s03250g [Populus trichocarpa]
           gi|550329003|gb|EEF00574.2| hypothetical protein
           POPTR_0010s03250g [Populus trichocarpa]
          Length = 392

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
 Frame = +3

Query: 21  PAVRKPDHILAQSLELCLENSGGYPLAKNFSKPA-----LSVDTASMGVMRNKYLQTAYL 185
           P+V +PD ILAQS E+CL NSGG P   NFS  +     L   TAS+G++R+KYL   Y 
Sbjct: 311 PSVHQPDEILAQSSEMCLNNSGGCPPLTNFSNQSPVDNILRPQTASVGMLRSKYLSKPYS 370

Query: 186 FPG 194
           F G
Sbjct: 371 FAG 373


Top