BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00034714
         (772 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    64   6e-08
emb|CCH50976.1| T4.15 [Malus x robusta]                                62   2e-07
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN...    59   3e-06
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...    57   7e-06
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    57   1e-05
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   1e-05

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1   LWIAALKSSGF*VSRSKTQHREYNLDKDTS*EEDSVKTYGKKIPQSIYFHCLDFIIHKNG 180
           LW   L+S G  +SRSKT++ E     + S  E  V+   ++IP+S  F  L  I+ KNG
Sbjct: 417 LWREVLESKGLCLSRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKNG 476

Query: 181 ETE----HQIRAIWFKWINAFRVLCERHIKINLE 270
           E +    H+I+A W KW +A  VLC+R + + L+
Sbjct: 477 ELDEDLNHRIQAGWMKWKSASGVLCDRRMPLKLK 510


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1    LWIAALKSSGF*VSRSKTQHREYNLDKDTS*EEDSVKTYGKKIPQSIYFHCLDFIIHKNG 180
            LW   L+S G  +SRSKT++ E     +    E  V+   ++IP+S  F  L  I+ KNG
Sbjct: 749  LWREVLESKGLRLSRSKTEYMECKFSANGGQNELGVRIGDQEIPKSDRFRYLGSILQKNG 808

Query: 181  ETE----HQIRAIWFKWINAFRVLCERHIKINLE 270
            E +    H+I+A W KW +A  VLC+R + + L+
Sbjct: 809  ELDGDLNHRIQAGWMKWKSASGVLCDRRMPLKLK 842


>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
           putative [Medicago truncatula]
          Length = 195

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
 Frame = +1

Query: 4   WIAALKSSGF*VSRSKTQHREYNLDKDTS*EEDSVKTYGKKIPQSIYFHCLDFIIHKNGE 183
           W  AL++ GF +SRSKT++ E+N     S     VK     IPQ   F  L   +  +GE
Sbjct: 34  WRQALEAYGFRLSRSKTEYMEWNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGE 93

Query: 184 TE----HQIRAIWFKWINAFRVLCERHIKINLE 270
            E    H+I+A W KW  A  VLC++ + + L+
Sbjct: 94  IEADVSHRIQAGWLKWRRASGVLCDKKVPLKLK 126


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
 Frame = +1

Query: 1   LWIAALKSSGF*VSRSKTQHREYNLDKDT-S*EEDSVKTYGKKIPQSIYFHCLDFIIHKN 177
           LW   L+S GF +SR+KT++ +      T   EE+ V   G+ +PQ   F  L  ++ K+
Sbjct: 71  LWRQTLESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKD 130

Query: 178 GETE----HQIRAIWFKWINAFRVLCERHIKINLE 270
           G+ +    H+I+A W KW  A  +LC++ +   L+
Sbjct: 131 GDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLK 165


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
 Frame = +1

Query: 1   LWIAALKSSGF*VSRSKTQHREYNLDKDT-S*EEDSVKTYGKKIPQSIYFHCLDFIIHKN 177
           LW   L+S GF +SR+KT++ +      T   EE+ V   G+ +PQ   F  L  ++ K+
Sbjct: 331 LWRQILESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKD 390

Query: 178 GETE----HQIRAIWFKWINAFRVLCERHIKINLE 270
           G+ +    H+I+A W KW  A  +LC++ +   L+
Sbjct: 391 GDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLK 425


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
 Frame = +1

Query: 4   WIAALKSSGF*VSRSKTQHREYNLDKDTS*EEDSVKTYGKKIPQSIYFHCLDFIIHKNGE 183
           W  AL++ GF +SRSKT++ E N     S     VK     IPQ   F  L   +  +GE
Sbjct: 396 WRQALEAYGFRLSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGE 455

Query: 184 TE----HQIRAIWFKWINAFRVLCERHIKINL 267
            E    H+I+A W KW  A  VLC++ + + L
Sbjct: 456 IEADVSHRIQAGWLKWRRASSVLCDKKVPLKL 487