BLASTX nr result
ID: Akebia23_contig00034338
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00034338
(501 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 105 5e-21
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 105 5e-21
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 105 5e-21
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 105 5e-21
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 105 5e-21
ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun... 104 1e-20
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 98 1e-18
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 96 4e-18
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 91 1e-16
ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 90 4e-16
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 88 1e-15
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 87 2e-15
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A... 86 4e-15
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 86 5e-15
ref|XP_004497514.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 82 6e-14
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 82 1e-13
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 81 2e-13
ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp... 81 2e-13
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 80 4e-13
ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Caps... 80 4e-13
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 105 bits (263), Expect = 5e-21
Identities = 75/163 (46%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = -1
Query: 486 SSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSF-PSLRRNDGLS 310
SSLVLPS SPKTL F + S +S + SHK+ KP+S+SSSF S +
Sbjct: 7 SSLVLPSLSPKTLAFYNSKPTSFSLLSSS----SSHKLLAKPISISSSFIHSFQPLPSSP 62
Query: 309 FRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGNVEM 130
RF R AVSS F DLKLFVGNLPF+VDSA+LAGLFE AGNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 129 VEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
VE VIYDK TGRSRGF
Sbjct: 123 VE----------------------------VIYDKVTGRSRGF 137
>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530827|gb|ESR42010.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 266
Score = 105 bits (263), Expect = 5e-21
Identities = 75/163 (46%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = -1
Query: 486 SSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSF-PSLRRNDGLS 310
SSLVLPS SPKTL F + S +S + SHK+ KP+S+SSSF S +
Sbjct: 7 SSLVLPSLSPKTLAFYNSKPTSFSLLSSS----SSHKLLAKPISISSSFIHSFQPLPSSP 62
Query: 309 FRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGNVEM 130
RF R AVSS F DLKLFVGNLPF+VDSA+LAGLFE AGNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 129 VEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
VE VIYDK TGRSRGF
Sbjct: 123 VE----------------------------VIYDKVTGRSRGF 137
>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530826|gb|ESR42009.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 263
Score = 105 bits (263), Expect = 5e-21
Identities = 75/163 (46%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = -1
Query: 486 SSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSF-PSLRRNDGLS 310
SSLVLPS SPKTL F + S +S + SHK+ KP+S+SSSF S +
Sbjct: 7 SSLVLPSLSPKTLAFYNSKPTSFSLLSSS----SSHKLLAKPISISSSFIHSFQPLPSSP 62
Query: 309 FRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGNVEM 130
RF R AVSS F DLKLFVGNLPF+VDSA+LAGLFE AGNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 129 VEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
VE VIYDK TGRSRGF
Sbjct: 123 VE----------------------------VIYDKVTGRSRGF 137
>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530825|gb|ESR42008.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 271
Score = 105 bits (263), Expect = 5e-21
Identities = 75/163 (46%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = -1
Query: 486 SSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSF-PSLRRNDGLS 310
SSLVLPS SPKTL F + S +S + SHK+ KP+S+SSSF S +
Sbjct: 7 SSLVLPSLSPKTLAFYNSKPTSFSLLSSS----SSHKLLAKPISISSSFIHSFQPLPSSP 62
Query: 309 FRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGNVEM 130
RF R AVSS F DLKLFVGNLPF+VDSA+LAGLFE AGNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 129 VEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
VE VIYDK TGRSRGF
Sbjct: 123 VE----------------------------VIYDKVTGRSRGF 137
>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530824|gb|ESR42007.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 105 bits (263), Expect = 5e-21
Identities = 75/163 (46%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = -1
Query: 486 SSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSF-PSLRRNDGLS 310
SSLVLPS SPKTL F + S +S + SHK+ KP+S+SSSF S +
Sbjct: 7 SSLVLPSLSPKTLAFYNSKPTSFSLLSSS----SSHKLLAKPISISSSFIHSFQPLPSSP 62
Query: 309 FRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGNVEM 130
RF R AVSS F DLKLFVGNLPF+VDSA+LAGLFE AGNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 129 VEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
VE VIYDK TGRSRGF
Sbjct: 123 VE----------------------------VIYDKVTGRSRGF 137
>ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
gi|462401286|gb|EMJ06843.1| hypothetical protein
PRUPE_ppa009295mg [Prunus persica]
Length = 298
Score = 104 bits (260), Expect = 1e-20
Identities = 76/169 (44%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Frame = -1
Query: 501 AAMTLS--SLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLR 328
A MT S SL LPS PKTL + S+PF S + S S + KP+S+S+SF +
Sbjct: 21 ATMTASTASLALPSLYPKTLALYTPKPTSVPFYSVSSS---SLTLGCKPISISASFLNSG 77
Query: 327 RNDGLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQ 148
R S RF R AVSS F DLKLFVGNLPF+VDSA+LAGLFE
Sbjct: 78 RFQSASSRFVRNVAVSSEFEQDEEVLSDDGEASFAPDLKLFVGNLPFSVDSAQLAGLFES 137
Query: 147 AGNVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
AGNVEMVE VIYDK TGRSRGF
Sbjct: 138 AGNVEMVE----------------------------VIYDKTTGRSRGF 158
>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 97.8 bits (242), Expect = 1e-18
Identities = 79/166 (47%), Positives = 85/166 (51%), Gaps = 4/166 (2%)
Frame = -1
Query: 486 SSLVLPSFS-PKTLIFSK---VRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRND 319
SSLVLPS S PKTL SK V SLPF +L K+H+ +S+S PS R
Sbjct: 5 SSLVLPSLSLPKTLAISKPTSVSFFSLPFSCSSL------KLHSNSISLS---PSSRGFL 55
Query: 318 GLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGN 139
LS RF R AVSS + DLKLFVGNLPFNVDSA LAGLFEQAGN
Sbjct: 56 TLSSRFVRNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGN 115
Query: 138 VEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
VEMVE VIYDK TGRSRGF
Sbjct: 116 VEMVE----------------------------VIYDKITGRSRGF 133
>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 280
Score = 96.3 bits (238), Expect = 4e-18
Identities = 70/167 (41%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Frame = -1
Query: 486 SSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSF-----PSLRRN 322
SSLVLPS +PKTL +P + S K+H KP+S+ SS P ++
Sbjct: 7 SSLVLPSLNPKTL----------SLCNPNKPISLSFKLHAKPISIPSSLFSSFVPLQQQP 56
Query: 321 DGLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAG 142
S RF A+SS F DLKLFVGNLPFNVDSA+LAGLFE AG
Sbjct: 57 YSSSSRFVPSVAISSEFGQEEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAG 116
Query: 141 NVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
NVEMVE VIYDK TGRSRGF
Sbjct: 117 NVEMVE----------------------------VIYDKVTGRSRGF 135
>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 273
Score = 91.3 bits (225), Expect = 1e-16
Identities = 71/168 (42%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Frame = -1
Query: 501 AAMTLSSLVLPSFS-PKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRR 325
+A + SSLVLPS + P T+ + SL F+SP S KP+S+ SF +
Sbjct: 2 SAASASSLVLPSLNHPNTIKSFYSKPNSLFFLSP------SSTSSLKPVSLLLSFQ--HQ 53
Query: 324 NDGLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQA 145
LS RF + A+SS F DLKLFVGNLPFNVDSA LAGLFE A
Sbjct: 54 QQPLSSRFLKNVAISSEFGQEEDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLAGLFETA 113
Query: 144 GNVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
GNVEMVE VIYDK TGRSRGF
Sbjct: 114 GNVEMVE----------------------------VIYDKVTGRSRGF 133
>ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 89.7 bits (221), Expect = 4e-16
Identities = 67/125 (53%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Frame = -1
Query: 486 SSLVLPSFS-PKTLIFSK---VRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRND 319
SSLVLPS S PKTL SK V SLPF +L K+H+ +S+S PS R
Sbjct: 5 SSLVLPSLSLPKTLAISKPTSVSFFSLPFSCSSL------KLHSNSISLS---PSSRGFL 55
Query: 318 GLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGN 139
LS RF R AVSS + DLKLFVGNLPFNVDSA LAGLFEQAGN
Sbjct: 56 TLSSRFVRNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGN 115
Query: 138 VEMVE 124
VEMVE
Sbjct: 116 VEMVE 120
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 87.8 bits (216), Expect = 1e-15
Identities = 68/169 (40%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Frame = -1
Query: 498 AMTLSSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRND 319
A + SSL L SF+PK+L F R S+ +SP+LS K S S SF + +
Sbjct: 2 AASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSF--------KLNSDSVSFSIAAKWN 53
Query: 318 GLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXD---LKLFVGNLPFNVDSAELAGLFEQ 148
+ RF R A++S F LKLFVGNLPFNVDSA+LA LFE
Sbjct: 54 SPASRFVRNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFES 113
Query: 147 AGNVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
AGNVEMVE VIYDK TGRSRGF
Sbjct: 114 AGNVEMVE----------------------------VIYDKITGRSRGF 134
>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| chloroplast RNA binding
protein [Arabidopsis thaliana]
Length = 289
Score = 87.4 bits (215), Expect = 2e-15
Identities = 68/169 (40%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Frame = -1
Query: 498 AMTLSSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRND 319
A + SSL L SF+PK+L F R S+ +SP+LS K S S SF + +
Sbjct: 2 AASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSF--------KLNSDSVSFSIAAKWN 53
Query: 318 GLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXD---LKLFVGNLPFNVDSAELAGLFEQ 148
+ RF R A++S F LKLFVGNLPFNVDSA+LA LFE
Sbjct: 54 SPASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFES 113
Query: 147 AGNVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
AGNVEMVE VIYDK TGRSRGF
Sbjct: 114 AGNVEMVE----------------------------VIYDKITGRSRGF 134
>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
gi|548849631|gb|ERN08390.1| hypothetical protein
AMTR_s00148p00072380 [Amborella trichopoda]
Length = 272
Score = 86.3 bits (212), Expect = 4e-15
Identities = 69/167 (41%), Positives = 78/167 (46%)
Frame = -1
Query: 501 AAMTLSSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRN 322
A++ L SL L SPKTLI + +R +L +PTLSL + LS+S P
Sbjct: 3 ASLILPSLSLSKTSPKTLISTGIRKLTLSLFTPTLSLNSKGRAS---LSLSKRAPL---- 55
Query: 321 DGLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAG 142
F R AV S F LKLFVGNLPF+VDSA LA LFEQAG
Sbjct: 56 ------FIRSVAVFSEFQQEEDEAPSEEANFSAD-LKLFVGNLPFSVDSARLAELFEQAG 108
Query: 141 NVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
NVEMVE VIYDKQTGRSRGF
Sbjct: 109 NVEMVE----------------------------VIYDKQTGRSRGF 127
>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 85.9 bits (211), Expect = 5e-15
Identities = 67/169 (39%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Frame = -1
Query: 498 AMTLSSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRND 319
A + SSL L SF+PK+L F R S+ + P+LS K S S SF + +
Sbjct: 2 AASASSLALSSFNPKSLPFCVSRPASVSLLPPSLSF--------KLNSDSVSFSIAAKWN 53
Query: 318 GLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXD---LKLFVGNLPFNVDSAELAGLFEQ 148
+ RF R A++S F LKLFVGNLPFNVDSA+LA LFE
Sbjct: 54 SPASRFVRNVAITSEFEVEEDGFADDAAPQQQSFSADLKLFVGNLPFNVDSAQLAQLFES 113
Query: 147 AGNVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
AGNVEMVE VIYDK TGRSRGF
Sbjct: 114 AGNVEMVE----------------------------VIYDKVTGRSRGF 134
>ref|XP_004497514.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like isoform X1
[Cicer arietinum]
Length = 284
Score = 82.4 bits (202), Expect = 6e-14
Identities = 65/159 (40%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Frame = -1
Query: 468 SFSPKTLIFSKVRDKSLPFISPT-LSLIPSHKIHN--KPLSVSSSFPSLRRNDGLSFRFF 298
S S +L +R K P SP S PS I+ KP S+SS+ S+R LS+RF
Sbjct: 2 SSSAASLALPTLRTKQ-PLCSPQCFSSHPSFSINPNFKPFSISSA--SVRPTLSLSYRFV 58
Query: 297 RKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGNVEMVEGQ 118
+ AVSS F +L+LFVGNLPF+VDSA+LA +FE AGNVEMVE
Sbjct: 59 SRVAVSSEFDQQEDTFDDGETPNYSSNLRLFVGNLPFSVDSAQLAEIFENAGNVEMVE-- 116
Query: 117 CTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
VIYDK TGRSRGF
Sbjct: 117 --------------------------VIYDKTTGRSRGF 129
>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 277
Score = 81.6 bits (200), Expect = 1e-13
Identities = 68/162 (41%), Positives = 77/162 (47%)
Frame = -1
Query: 486 SSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRNDGLSF 307
+SLVLPS +PKTL + S+ S LS S K P+S+S+SF S + S
Sbjct: 6 ASLVLPSLTPKTLALYSPKPTSVSLFS--LSSFSSLK----PISISASFLSSGK---ASR 56
Query: 306 RFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFEQAGNVEMV 127
F R AVS DLKLFVGNLPF VDSA+LA LFE AGNVEMV
Sbjct: 57 SFVRHVAVSDFEQDEEVLSGDEAEPNFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMV 116
Query: 126 EGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
E VIYDK TGRSRGF
Sbjct: 117 E----------------------------VIYDKTTGRSRGF 130
>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 80.9 bits (198), Expect = 2e-13
Identities = 68/166 (40%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Frame = -1
Query: 486 SSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIH--NKPLSVSSSF-PSLRRNDG 316
+SL LPS + KTL S + K SL PS I + P+S+SS PS R +
Sbjct: 6 ASLTLPSLTLKTLSSSNPKFK-------LFSLNPSSSIRLLSNPISISSFLLPSHRVSPP 58
Query: 315 LSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXD-LKLFVGNLPFNVDSAELAGLFEQAGN 139
S RF R AVSS + LKLFVGNLPF VDSA+LAGLFE AG
Sbjct: 59 FSSRFVRNVAVSSDYGQEEGTLEVDGDDSSYAPDLKLFVGNLPFTVDSAQLAGLFESAGQ 118
Query: 138 VEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
VE VE VIYDK TGRSRGF
Sbjct: 119 VERVE----------------------------VIYDKTTGRSRGF 136
>ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 286
Score = 80.9 bits (198), Expect = 2e-13
Identities = 66/170 (38%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Frame = -1
Query: 501 AAMTLSSLVLPSFS-PKTL--IFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSL 331
+A + SSLVLPS + P T+ +SK S +S T S+ KP S+ SF
Sbjct: 2 SATSASSLVLPSLNHPNTIKSFYSKPTSLSFLSLSSTSSI--------KPASLFLSFQQ- 52
Query: 330 RRNDGLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXDLKLFVGNLPFNVDSAELAGLFE 151
++ LS RF + A+SS F DL+LFVGNLPFNV+SA+LA LF+
Sbjct: 53 KQQQPLSSRFLKSVAISSEFGQEEDVFGDGDEPSFSPDLQLFVGNLPFNVNSAQLADLFK 112
Query: 150 QAGNVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
AGNVEMVE V YDK TGRSRGF
Sbjct: 113 SAGNVEMVE----------------------------VKYDKVTGRSRGF 134
>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
gi|482563453|gb|EOA27643.1| hypothetical protein
CARUB_v10023790mg [Capsella rubella]
Length = 284
Score = 79.7 bits (195), Expect = 4e-13
Identities = 65/168 (38%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Frame = -1
Query: 498 AMTLSSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRND 319
A + SSL L SF+PK+L F R S+ + P+LS K+++ +SVS + +
Sbjct: 2 AASASSLALSSFNPKSLPFCVSRPASVSLLPPSLSF----KLNSDSVSVSIA----AKWS 53
Query: 318 GLSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXD--LKLFVGNLPFNVDSAELAGLFEQA 145
+ RF R A S LKLFVGNLPFNVDSA+LA LFE A
Sbjct: 54 SPASRFVRNVATSEFEVEEDGFSDDAAPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESA 113
Query: 144 GNVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
GNVEMVE VIYDK TGRSRGF
Sbjct: 114 GNVEMVE----------------------------VIYDKVTGRSRGF 133
>ref|XP_006291486.1| hypothetical protein CARUB_v10017634mg [Capsella rubella]
gi|482560193|gb|EOA24384.1| hypothetical protein
CARUB_v10017634mg [Capsella rubella]
Length = 327
Score = 79.7 bits (195), Expect = 4e-13
Identities = 67/172 (38%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Frame = -1
Query: 495 MTLSSLVLPSFSPKTLIFSKVRDKSLPFISPTLSLIPSHKIHNKPLSVSSSFPSLRRNDG 316
M+ S+ L +F+PK+L S R SL + P+LS K+H+ L + SL+
Sbjct: 1 MSASASSLSAFNPKSLPLSVSRPASLSVLPPSLSF----KLHSDHLVSLFASSSLK---- 52
Query: 315 LSFRFFRKFAVSSRFXXXXXXXXXXXXXXXXXD-------LKLFVGNLPFNVDSAELAGL 157
S RF R AVSS F + LKLFVGNL FNVDSA+LA L
Sbjct: 53 CSSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERTSFSPDLKLFVGNLSFNVDSAQLAQL 112
Query: 156 FEQAGNVEMVEGQCTHTCMHTCMLLCG*GFI*YTN*ESKVIYDKQTGRSRGF 1
FE AGNVEMVE VIYDK TGRSRGF
Sbjct: 113 FESAGNVEMVE----------------------------VIYDKVTGRSRGF 136