BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00030392
         (426 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   217   1e-54
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]   203   2e-50
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   201   9e-50
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]   195   5e-48
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]   192   4e-47
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   184   1e-44
emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]   183   2e-44
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762...   171   1e-40
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660...   170   2e-40
ref|XP_006584318.1| PREDICTED: uncharacterized protein LOC102666...   169   4e-40
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   164   9e-39
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   163   2e-38
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   163   3e-38
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]   163   3e-38
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   162   3e-38
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   162   6e-38
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [...   161   8e-38
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc...   160   1e-37
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho...   160   1e-37
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...   160   2e-37

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  217 bits (553), Expect = 1e-54
 Identities = 93/139 (66%), Positives = 121/139 (87%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+ TPS++G++YY+HFIDAYSR+TWIY+L+HKS+ F+ F++FK Q ELQLG  +KA+Q
Sbjct: 571 WGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQ 630

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           ++W GE+R+F+ +L  +GI HR+SCP  H+QNGLAERKHR IVE+G+ LLAQAS+P KYW
Sbjct: 631 SDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYW 690

Query: 62  DEAFRTSVFLINRLPTAVL 6
           DEAFRTSV+LINRLPT VL
Sbjct: 691 DEAFRTSVYLINRLPTPVL 709


>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
          Length = 1079

 Score =  203 bits (516), Expect = 2e-50
 Identities = 92/138 (66%), Positives = 115/138 (83%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGPSP  S+NGY+YYV F+DA+SRY WIYLLR+KS++F+TF NFK QA+LQLG  +K +Q
Sbjct: 517 WGPSPVQSSNGYKYYVCFVDAFSRYNWIYLLRNKSNSFQTFQNFKAQAKLQLGFKIKCLQ 576

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           ++W GEF AF+ +L  +GI HR+ CP  +QQNG+AERKHR IVENGLTLLA+ASMP KYW
Sbjct: 577 SDWRGEFCAFTDYLTINGIIHRIYCPHTYQQNGVAERKHRHIVENGLTLLARASMPFKYW 636

Query: 62  DEAFRTSVFLINRLPTAV 9
           DE+F+T VFL NRLP+ V
Sbjct: 637 DESFKTVVFLHNRLPSPV 654


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  201 bits (511), Expect = 9e-50
 Identities = 90/139 (64%), Positives = 115/139 (82%)
 Frame = -2

Query: 422  WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
            WGP+   S +GYRYY+HF+DA+SR++WI+LLR+KS+  +TFVNFK Q ELQ    +K++Q
Sbjct: 588  WGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQ 647

Query: 242  TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
            T+W GEFRAF S+L ++GI HRVSCP   QQNG+AERKHR IVE+GLTLL  AS+PLK+W
Sbjct: 648  TDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFW 707

Query: 62   DEAFRTSVFLINRLPTAVL 6
            DE+FRT V+L NRLPTA+L
Sbjct: 708  DESFRTVVYLSNRLPTAIL 726


>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
          Length = 1138

 Score =  195 bits (496), Expect = 5e-48
 Identities = 88/139 (63%), Positives = 113/139 (81%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+P  S +GYRYY+HF+DA+SR++WI+LLR++S+  +TFVNFK Q ELQ    +K++Q
Sbjct: 496 WGPAPVLSNSGYRYYIHFVDAFSRFSWIFLLRNESEAIKTFVNFKTQVELQFDSKIKSLQ 555

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           T+W GEFRAF S+L ++GI HRVSCP   QQNG+AE KHR IV +GLTLL  A +PLK+W
Sbjct: 556 TDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAEWKHRTIVXHGLTLLHIAYLPLKFW 615

Query: 62  DEAFRTSVFLINRLPTAVL 6
           DE+FRT V+L NRLPTAVL
Sbjct: 616 DESFRTVVYLSNRLPTAVL 634


>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
          Length = 1211

 Score =  192 bits (488), Expect = 4e-47
 Identities = 86/138 (62%), Positives = 109/138 (78%)
 Frame = -2

Query: 419 GPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQT 240
           GP+P  S +GYRYY+HF+D +SR++WI+LLR+KS+  +TFVNFK Q ELQ    +K++QT
Sbjct: 410 GPAPVLSNSGYRYYIHFVDVFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDSKIKSLQT 469

Query: 239 NWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYWD 60
           NW GEFRAF S+L ++GI HRVSCP   QQNG+ E KHR IVE+GLTLL   S+PLK+WD
Sbjct: 470 NWGGEFRAFQSYLAENGIVHRVSCPXTQQQNGVVEXKHRTIVEHGLTLLHTTSLPLKFWD 529

Query: 59  EAFRTSVFLINRLPTAVL 6
           E+FR  V+L NRLPT VL
Sbjct: 530 ESFRIVVYLSNRLPTVVL 547


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  184 bits (466), Expect = 1e-44
 Identities = 86/136 (63%), Positives = 103/136 (75%)
 Frame = -2

Query: 413 SPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQTNW 234
           +P  S+ G+ YYV F DAYSRYTW+Y L+ KS T E F+ FK QAELQ GC LK  QT+W
Sbjct: 386 APINSSYGFTYYVSFXDAYSRYTWVYXLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDW 445

Query: 233 DGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYWDEA 54
            GEFR+  ++   +GI HR+SCP   +QNG+ ERKHR IVE GLTLLAQAS+PLKYW +A
Sbjct: 446 GGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDA 505

Query: 53  FRTSVFLINRLPTAVL 6
           F T+VFLINRLPT VL
Sbjct: 506 FSTAVFLINRLPTEVL 521


>emb|CAN67819.1| hypothetical protein VITISV_041315 [Vitis vinifera]
          Length = 1242

 Score =  183 bits (465), Expect = 2e-44
 Identities = 86/139 (61%), Positives = 102/139 (73%)
 Frame = -2

Query: 422  WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
            WGP+P  S+ G+ YYV F DAYSRYT +Y L+ KS T E F+ FK QAELQ GC L   Q
Sbjct: 629  WGPAPINSSYGFTYYVSFXDAYSRYTXVYFLKTKSQTREAFLMFKAQAELQFGCKLXTFQ 688

Query: 242  TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
             +W GEFR+  ++   +GI HR+SCP   +QNG+ ERKHR IVE GLTLLAQAS+PLKYW
Sbjct: 689  XDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYW 748

Query: 62   DEAFRTSVFLINRLPTAVL 6
             +AF T VFLINRLPT VL
Sbjct: 749  PDAFSTXVFLINRLPTEVL 767


>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
          Length = 866

 Score =  171 bits (432), Expect = 1e-40
 Identities = 80/140 (57%), Positives = 100/140 (71%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+PT S     YYV FID YS+YTWIYLL+HKSD F  F  F++  E +L   +  IQ
Sbjct: 435 WGPAPT-SIGRSTYYVSFIDDYSKYTWIYLLKHKSDVFRVFQEFQQLVERKLSKKILCIQ 493

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           ++W GE+   +SF +  GI HRVSCP  HQQNG AERKHR I+E GL LLA ASMPLK+W
Sbjct: 494 SDWGGEYEKLNSFFKKIGISHRVSCPHTHQQNGAAERKHRHIIEVGLALLANASMPLKFW 553

Query: 62  DEAFRTSVFLINRLPTAVLS 3
           D+AF T+ +LIN LP+ V++
Sbjct: 554 DQAFLTATYLINLLPSKVIN 573


>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
          Length = 868

 Score =  170 bits (431), Expect = 2e-40
 Identities = 74/140 (52%), Positives = 100/140 (71%)
 Frame = -2

Query: 422  WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
            WGP+P  S  GY Y++  +DA+SR+ W++ LR KSDT   F+ FKK  ELQ   P+K++Q
Sbjct: 633  WGPAPMQSLGGYNYFLTCVDAFSRFVWVFPLRLKSDTLPQFIQFKKMVELQFNYPIKSVQ 692

Query: 242  TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
            +N  GEFR F+ +L D GI HR +CP  H QNG+ ERKHR  VE GL LLAQ+++PLK+W
Sbjct: 693  SNGGGEFRPFTKYLNDLGIVHRFTCPHTHHQNGIVERKHRYTVETGLALLAQSTLPLKFW 752

Query: 62   DEAFRTSVFLINRLPTAVLS 3
            D +F T+ +LINRLP+  L+
Sbjct: 753  DHSFVTAAYLINRLPSVSLN 772


>ref|XP_006584318.1| PREDICTED: uncharacterized protein LOC102666325 [Glycine max]
          Length = 651

 Score =  169 bits (428), Expect = 4e-40
 Identities = 75/136 (55%), Positives = 99/136 (72%)
 Frame = -2

Query: 419 GPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQT 240
           G +P  S+ GY+YY+ FIDA+S+Y W+Y L  KS+T   F  FK  AELQL   +KAIQ+
Sbjct: 410 GQAPMQSSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIFKQFKALAELQLNTKIKAIQS 469

Query: 239 NWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYWD 60
           +W GEFR+F+S+L   GI HR+ CP  H QNG+ ERKHR IVE GL+LL+ +S+P  YWD
Sbjct: 470 DWGGEFRSFTSYLSQLGIIHRIICPHTHHQNGVVERKHRHIVEMGLSLLSHSSLPYHYWD 529

Query: 59  EAFRTSVFLINRLPTA 12
            AF T+V++INRLP +
Sbjct: 530 HAFHTAVYIINRLPAS 545


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1256

 Score =  164 bits (416), Expect = 9e-39
 Identities = 75/139 (53%), Positives = 101/139 (72%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+P  +  G +YYV FIDA+SR+TWIY L++KS+ F+ F  F+   E      + ++Q
Sbjct: 352 WGPAPV-AGGGKKYYVSFIDAFSRFTWIYFLKYKSEVFQKFQEFQCLVERMFNRKIISMQ 410

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           T+W GE++  ++F    GI H VSCP  HQQNG AERKHR IVE GL+LLA AS+PLK+W
Sbjct: 411 TDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLKFW 470

Query: 62  DEAFRTSVFLINRLPTAVL 6
           DEA+++ V+LINR+PT VL
Sbjct: 471 DEAYQSGVYLINRMPTKVL 489


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  163 bits (413), Expect = 2e-38
 Identities = 76/140 (54%), Positives = 99/140 (70%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           +GP+   S   Y+YYV FID YS++TWIYLLRHKSD +++F  F+   E   G  + A Q
Sbjct: 523 FGPA-IDSFGRYKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQ 581

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           ++W GE+   ++  +  GIHH+VSCP  HQQNG AERKHR IVE GL LLAQ+SMPLKYW
Sbjct: 582 SDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYW 641

Query: 62  DEAFRTSVFLINRLPTAVLS 3
           D AF  +V+LINR P+  ++
Sbjct: 642 DHAFLAAVYLINRTPSKTIA 661


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  163 bits (412), Expect = 3e-38
 Identities = 75/139 (53%), Positives = 100/139 (71%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+P  S    +YYV FID +S++TWIYL++HKS  F+ F  F+   E Q    + A+Q
Sbjct: 517 WGPAPE-SVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQ 575

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           T+W GE+++ +SF    GI H VSCP  HQQNG AERKHR IVE GL+LL+ ASMPLK+W
Sbjct: 576 TDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFW 635

Query: 62  DEAFRTSVFLINRLPTAVL 6
           DEAF+ + +LINR+P+ V+
Sbjct: 636 DEAFQVATYLINRVPSRVI 654


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score =  163 bits (412), Expect = 3e-38
 Identities = 74/140 (52%), Positives = 100/140 (71%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+P    NG RY+V F+D ++R++W+YLL  K      F+ FK   E Q    ++ +Q
Sbjct: 499 WGPAPVVGTNGARYFVLFVDDHTRFSWLYLLAFKDQAISGFLQFKVMIETQFDTKVRMLQ 558

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           TNW GEF+AF++ L   GI HRVSCPS  QQNG  ERKHR +VE GL+LLA AS+PLKYW
Sbjct: 559 TNWGGEFQAFTNTLCKFGILHRVSCPSTSQQNGRVERKHRHVVEVGLSLLAHASIPLKYW 618

Query: 62  DEAFRTSVFLINRLPTAVLS 3
             AF+++++LINRLP++VL+
Sbjct: 619 PFAFQSALYLINRLPSSVLN 638


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1145

 Score =  162 bits (411), Expect = 3e-38
 Identities = 77/139 (55%), Positives = 98/139 (70%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+P  S    +YYV FID +S++TWIYLL+HKS  FE F  F+   E      + A+Q
Sbjct: 393 WGPAPE-SVGRKKYYVSFIDDFSKFTWIYLLQHKSQVFEKFQEFQVMIERLFDRKILAMQ 451

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           T+W GE+RA +SF    GI H VSCP  HQQNG AERKHR IVE GL+LL+ A MPLK+W
Sbjct: 452 TDWGGEYRALNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSHAHMPLKFW 511

Query: 62  DEAFRTSVFLINRLPTAVL 6
           DEAF+ + +LINR+P+ V+
Sbjct: 512 DEAFQAATYLINRVPSRVI 530


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
           Group]
          Length = 1399

 Score =  162 bits (409), Expect = 6e-38
 Identities = 73/140 (52%), Positives = 99/140 (70%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+P  S  G ++YV FID YS++TW+YLL+HKS+ F+ F  F+   E   G  + A+Q
Sbjct: 485 WGPAPI-SVGGKKFYVSFIDDYSKFTWVYLLKHKSEVFQKFQEFQTLVERFFGHKILAVQ 543

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           T+W GE++  ++F    GI H VSCP AHQQNG AERKHR ++E  LTLLA ASMP+K+W
Sbjct: 544 TDWGGEYQKLNTFFAKIGISHHVSCPYAHQQNGSAERKHRHLIEVALTLLAHASMPIKFW 603

Query: 62  DEAFRTSVFLINRLPTAVLS 3
           DEA   + +LINR P+ V++
Sbjct: 604 DEAVLAAAYLINRTPSKVIN 623


>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
           Japonica Group] gi|31431217|gb|AAP53032.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1042

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/139 (54%), Positives = 98/139 (70%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+ T S  G ++YV FID+Y +++WIY L+HKSD FE F +F++  E      + A+Q
Sbjct: 416 WGPAST-SFGGKKFYVSFIDSYRKFSWIYFLKHKSDVFEKFHDFQQLVERLFDRKIIAMQ 474

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           T+W GE++  +SF    GI H VSCP  HQQNG AERKHR IVE GL LLA ASMPLKYW
Sbjct: 475 TDWGGEYQKLNSFFEKIGISHHVSCPHTHQQNGSAERKHRLIVEVGLALLAYASMPLKYW 534

Query: 62  DEAFRTSVFLINRLPTAVL 6
           DEAF  +  +INR+P+ +L
Sbjct: 535 DEAFLAATHIINRIPSRIL 553


>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1177

 Score =  160 bits (406), Expect = 1e-37
 Identities = 75/139 (53%), Positives = 95/139 (68%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+ + S    RYYV FID YS++ WIY L+ KS+ FE F  F+   E Q    +  +Q
Sbjct: 400 WGPA-SDSVGAKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQFNRKILGMQ 458

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           T+W GE++  +SF +  GI H+VSCP  HQQNG  ERKHR IVE GL+LLA ASMPLK+W
Sbjct: 459 TDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFW 518

Query: 62  DEAFRTSVFLINRLPTAVL 6
           DEAF  + +LINRLP  V+
Sbjct: 519 DEAFLAATYLINRLPRKVI 537


>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
           sativa Japonica Group]
           gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
           protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  160 bits (406), Expect = 1e-37
 Identities = 75/139 (53%), Positives = 95/139 (68%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGP+ + S    RYYV FID YS++ WIY L+ KS+ FE F  F+   E Q    +  +Q
Sbjct: 511 WGPA-SDSVGAKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQFNRKILGMQ 569

Query: 242 TNWDGEFRAFSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLKYW 63
           T+W GE++  +SF +  GI H+VSCP  HQQNG  ERKHR IVE GL+LLA ASMPLK+W
Sbjct: 570 TDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFW 629

Query: 62  DEAFRTSVFLINRLPTAVL 6
           DEAF  + +LINRLP  V+
Sbjct: 630 DEAFLAATYLINRLPRKVI 648


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score =  160 bits (405), Expect = 2e-37
 Identities = 80/141 (56%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
 Frame = -2

Query: 422 WGPSPTPSANGYRYYVHFIDAYSRYTWIYLLRHKSDTFETFVNFKKQAELQLGCPLKAIQ 243
           WGPSPT S  G+RYYV FID YSR+TW Y L+ KSD F TFV F+K  E QLG  +K  Q
Sbjct: 524 WGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQ 583

Query: 242 TNWDGEFRA--FSSFLRDHGIHHRVSCPSAHQQNGLAERKHRRIVENGLTLLAQASMPLK 69
            +  GEF +  F   L+DHGI   +SCP   QQNG+AERKHR IVE GL+++ Q+ +PLK
Sbjct: 584 CDGGGEFISSQFLKHLQDHGIQQNMSCPYTPQQNGMAERKHRHIVELGLSMIFQSKLPLK 643

Query: 68  YWDEAFRTSVFLINRLPTAVL 6
           YW E+F T+ F+IN LPT+ L
Sbjct: 644 YWLESFFTANFVINLLPTSSL 664