BLASTX nr result
ID: Akebia23_contig00029676
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00029676
(612 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 104 2e-20
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 101 1e-19
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 101 1e-19
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 100 3e-19
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali... 100 3e-19
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 99 7e-19
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 98 2e-18
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 97 5e-18
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 97 5e-18
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 97 5e-18
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 96 6e-18
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 96 8e-18
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 96 8e-18
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 96 1e-17
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 95 1e-17
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 95 1e-17
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 95 1e-17
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 94 3e-17
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 94 4e-17
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 94 4e-17
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 104 bits (260), Expect = 2e-20
Identities = 50/119 (42%), Positives = 70/119 (58%)
Frame = -3
Query: 373 DFRVEMHTMCDLGLVKPASSTPVTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQ 194
D R T+ + K + + F W +C+ TP +S+NG L GYF+G++G RQ
Sbjct: 46 DLRKAFDTVSWEFITKIMQALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQ 105
Query: 193 GDPLSPYLFVLIMDSLSWLLDKQVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
GDPLSPYLF++ M+ LS +LD+ + LHPK P I+HL FADD+MI G +S
Sbjct: 106 GDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRS 164
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 101 bits (252), Expect = 1e-19
Identities = 54/105 (51%), Positives = 69/105 (65%)
Frame = -3
Query: 331 VKPASSTPVTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMD 152
+K A++ P F NW CI++ I+V+GSL GYF+G KG RQGDPLSP LFV+ M+
Sbjct: 609 LKAANAPP---RFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAME 665
Query: 151 SLSWLLDKQVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
LS LL+ + G+IG HPK E +IS L FADDLMI + G S
Sbjct: 666 ILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASS 710
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 101 bits (252), Expect = 1e-19
Identities = 53/97 (54%), Positives = 62/97 (63%)
Frame = -3
Query: 307 VTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDK 128
V + F NW CISTP +SVNG G+F+ KG RQGDPLSPYLFVL M+ S LL+
Sbjct: 593 VPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLNS 652
Query: 127 QVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ SG I HPK + ISHL FADD+MI F G S
Sbjct: 653 RFDSGYIRYHPKASDLSISHLMFADDVMIFFDGGSSS 689
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 100 bits (250), Expect = 3e-19
Identities = 50/108 (46%), Positives = 69/108 (63%)
Frame = -3
Query: 340 LGLVKPASSTPVTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVL 161
+ ++K + P+ F NW +CISTP + I+ NG L G+F GKKG RQGDP+S +LFVL
Sbjct: 154 INILKALNLPPI---FINWIWVCISTPSYSIAYNGELIGFFVGKKGIRQGDPMSSHLFVL 210
Query: 160 IMDSLSWLLDKQVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+MD L+ LD G LHPK P I+HL FADD+++ G++ S
Sbjct: 211 VMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSS 258
>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 543
Score = 100 bits (250), Expect = 3e-19
Identities = 50/108 (46%), Positives = 69/108 (63%)
Frame = -3
Query: 340 LGLVKPASSTPVTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVL 161
+ ++K + P+ F NW +CISTP + I+ NG L G+F GKKG RQGDP+S +LFVL
Sbjct: 154 INILKALNLPPI---FINWIWVCISTPSYSIAYNGELIGFFVGKKGIRQGDPMSSHLFVL 210
Query: 160 IMDSLSWLLDKQVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+MD L+ LD G LHPK P I+HL FADD+++ G++ S
Sbjct: 211 VMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSS 258
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 99.4 bits (246), Expect = 7e-19
Identities = 50/93 (53%), Positives = 59/93 (63%)
Frame = -3
Query: 307 VTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDK 128
+ F NW CISTP +S+NG G+F+ KG RQGDPLSPYLFVL M++ S LL
Sbjct: 615 IPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHS 674
Query: 127 QVFSGTIGLHPKFKEPKISHLCFADDLMICFKG 29
+ SG I HPK ISHL FADD+MI F G
Sbjct: 675 RYESGLIHYHPKASNLSISHLMFADDVMIFFDG 707
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 98.2 bits (243), Expect = 2e-18
Identities = 49/93 (52%), Positives = 60/93 (64%)
Frame = -3
Query: 295 FTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFS 116
F +W +CI+TP + VNG L G+F+ +G RQG LSPYLFV+ MD LS LLDK V
Sbjct: 178 FIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGI 237
Query: 115 GTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
G IG HP K ++HL FADDLMI G +S
Sbjct: 238 GRIGYHPHCKRMGLTHLSFADDLMILTDGQCRS 270
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 96.7 bits (239), Expect = 5e-18
Identities = 51/93 (54%), Positives = 59/93 (63%)
Frame = -3
Query: 295 FTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFS 116
+ NW CI+TP ISVNG+ G+F KG RQGDPLSPYLFVL M+ S LL + S
Sbjct: 479 YINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDS 538
Query: 115 GTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
G I HPK + ISHL FADD+MI F G S
Sbjct: 539 GYIHYHPKAGDLSISHLMFADDVMIFFDGGSSS 571
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 96.7 bits (239), Expect = 5e-18
Identities = 51/93 (54%), Positives = 59/93 (63%)
Frame = -3
Query: 295 FTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFS 116
+ NW CI+TP ISVNG+ G+F KG RQGDPLSPYLFVL M+ S LL + S
Sbjct: 479 YINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDS 538
Query: 115 GTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
G I HPK + ISHL FADD+MI F G S
Sbjct: 539 GYIHYHPKAGDLSISHLMFADDVMIFFDGGSSS 571
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 96.7 bits (239), Expect = 5e-18
Identities = 47/94 (50%), Positives = 60/94 (63%)
Frame = -3
Query: 298 DFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVF 119
+F +W +C+ST I VNG L GYF +G RQG LSPYLFV+ MD LS +LDK
Sbjct: 345 EFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAG 404
Query: 118 SGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ G HP+ K ++HLCFADDLMI G ++S
Sbjct: 405 AREFGYHPRCKTLGLTHLCFADDLMILTDGKIRS 438
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 96.3 bits (238), Expect = 6e-18
Identities = 46/94 (48%), Positives = 62/94 (65%)
Frame = -3
Query: 298 DFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVF 119
+F +W ++CIST + VNG L G+F+ K+G RQG LSPYLFV+ MD LS LLD+
Sbjct: 151 EFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAAS 210
Query: 118 SGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ G H + KE ++HL FADDLM+ G V+S
Sbjct: 211 AKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRS 244
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 95.9 bits (237), Expect = 8e-18
Identities = 50/97 (51%), Positives = 59/97 (60%)
Frame = -3
Query: 307 VTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDK 128
V F W CISTP + VNGS G+F+ KG RQGDPLSPYLFVL M+ S LL
Sbjct: 616 VPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKA 675
Query: 127 QVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ +G I HPK + ISHL FADD+M+ F G S
Sbjct: 676 RFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSS 712
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 95.9 bits (237), Expect = 8e-18
Identities = 50/97 (51%), Positives = 59/97 (60%)
Frame = -3
Query: 307 VTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDK 128
V F W CISTP + VNGS G+F+ KG RQGDPLSPYLFVL M+ S LL
Sbjct: 616 VPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKA 675
Query: 127 QVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ +G I HPK + ISHL FADD+M+ F G S
Sbjct: 676 RFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSS 712
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 95.5 bits (236), Expect = 1e-17
Identities = 46/94 (48%), Positives = 60/94 (63%)
Frame = -3
Query: 298 DFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVF 119
+F +W ICI+T + VNG L GYF+ +G RQG LSPYLFV+ MD LS +LDK
Sbjct: 624 EFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAA 683
Query: 118 SGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ G HPK K ++HL FADDLM+ G ++S
Sbjct: 684 ARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRS 717
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 95.1 bits (235), Expect = 1e-17
Identities = 50/106 (47%), Positives = 62/106 (58%)
Frame = -3
Query: 334 LVKPASSTPVTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIM 155
+V + V FT W L C+ST + +NG G+F KG RQGDP+SPYLFVL M
Sbjct: 503 IVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAM 562
Query: 154 DSLSWLLDKQVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ S LL + SG I HPK + +ISHL FADD+MI F G S
Sbjct: 563 EVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSS 608
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 95.1 bits (235), Expect = 1e-17
Identities = 45/94 (47%), Positives = 60/94 (63%)
Frame = -3
Query: 298 DFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVF 119
+F +W +CIST + VNG L G+F K+G RQG LSPYLFV+ M+ LS ++D
Sbjct: 197 NFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAV 256
Query: 118 SGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
IG HPK K+ ++HLCFADDLM+ G +S
Sbjct: 257 HRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRS 290
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 95.1 bits (235), Expect = 1e-17
Identities = 48/106 (45%), Positives = 62/106 (58%)
Frame = -3
Query: 334 LVKPASSTPVTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIM 155
L+ S+ +F +W CI+T + VNG L GYF +G RQG LSPYLFV+ M
Sbjct: 17 LINALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARGIRQGCALSPYLFVISM 76
Query: 154 DSLSWLLDKQVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ LS +LD+ G HPK K ++HLCFADDLMI G V+S
Sbjct: 77 EVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRS 122
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 94.0 bits (232), Expect = 3e-17
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = -3
Query: 307 VTSDFTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDK 128
+ S+F +W ++C++T + VNG L GYF+ K G RQG LSPYLFV+ MD L+ +LDK
Sbjct: 71 IPSEFVHWIMLCVTTASFSVQVNGELAGYFQSKCGLRQGCSLSPYLFVISMDVLAKMLDK 130
Query: 127 QVFSGTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
+ G HP+ K+ ++HL FADDLMI V S
Sbjct: 131 AAGAKKYGYHPRCKDMGLTHLSFADDLMIFSDAGVPS 167
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 93.6 bits (231), Expect = 4e-17
Identities = 45/93 (48%), Positives = 60/93 (64%)
Frame = -3
Query: 295 FTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFS 116
F +W +CIS+ + I+ NG L G+F+GKKG RQGDP+S +LFVL+MD LS LD +
Sbjct: 662 FIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALN 721
Query: 115 GTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
G LHP P I+HL FADD+++ G S
Sbjct: 722 GLFNLHPNCLAPIITHLSFADDVLVFSDGAASS 754
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 93.6 bits (231), Expect = 4e-17
Identities = 45/93 (48%), Positives = 60/93 (64%)
Frame = -3
Query: 295 FTNWFLICISTPMH*ISVNGSLKGYFEGKKGPRQGDPLSPYLFVLIMDSLSWLLDKQVFS 116
F +W +CIS+ + I+ NG L G+F+GKKG RQGDP+S +LFVL+MD LS LD +
Sbjct: 619 FIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALN 678
Query: 115 GTIGLHPKFKEPKISHLCFADDLMICFKGNVKS 17
G LHP P I+HL FADD+++ G S
Sbjct: 679 GLFNLHPNCLAPIITHLSFADDVLVFSDGAASS 711