BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00028274
         (905 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   399   e-109
emb|CBI26203.3| unnamed protein product [Vitis vinifera]              390   e-106
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu...   379   e-103
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr...   364   2e-98
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   360   5e-97
ref|XP_007222883.1| hypothetical protein PRUPE_ppa005191mg [Prun...   357   3e-96
ref|XP_007034658.1| P-loop containing nucleoside triphosphate hy...   355   1e-95
ref|XP_007034657.1| P-loop containing nucleoside triphosphate hy...   355   1e-95
ref|XP_007034656.1| P-loop containing nucleoside triphosphate hy...   355   1e-95
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not...   355   2e-95
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   350   3e-94
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ...   350   4e-94
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   342   9e-92
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   342   9e-92
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   341   2e-91
ref|XP_007153921.1| hypothetical protein PHAVU_003G0764001g, par...   341   3e-91
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ...   341   3e-91
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ...   341   3e-91
ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabido...   333   5e-89
ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutr...   332   9e-89

>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Vitis vinifera]
          Length = 482

 Score =  399 bits (1026), Expect = e-109
 Identities = 205/269 (76%), Positives = 232/269 (86%), Gaps = 1/269 (0%)
 Frame = -2

Query: 805 PRFFFPIQNPNPRNSTSIYCRNRFLNSTI-PRPSQAPLDVSCITSTSEIVERALTLREIC 629
           PR   P  N N R  ++++   R  NS    +P+QA L+ S IT  S+I ER LTLREIC
Sbjct: 23  PRALAPSLNSNRRTDSTVHFTRRVSNSNCNAKPAQATLNSSSITEASDIGERTLTLREIC 82

Query: 628 EGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFSVIN 449
           +G VPEH+LRR E+VGF VPT+VQ+Q+LP+LLSGRDCILHAQTGSGKTL YLLLIFSV+N
Sbjct: 83  QGCVPEHVLRRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVN 142

Query: 448 VRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHKSWL 269
            + SAVQALIVVPTRELG+QVTKVARMLAAKPME ELE K+CTVMALLDGGML+RHKSWL
Sbjct: 143 TKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWL 202

Query: 268 KAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSI 89
           KAEPPTIVVAT+ SLCQMLEK+IFKLE+M+VLVIDEVDFMFN+SKQV SLRKLLTSYSS 
Sbjct: 203 KAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSST 262

Query: 88  NSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           N+RQTVFASASIPQH RFL+DCIQQKWTK
Sbjct: 263 NNRQTVFASASIPQHRRFLHDCIQQKWTK 291


>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  390 bits (1003), Expect = e-106
 Identities = 203/273 (74%), Positives = 231/273 (84%), Gaps = 5/273 (1%)
 Frame = -2

Query: 805 PRFFFPIQNPNPRNSTSIYCRNRFLNSTI-PRPSQAPLDVSCITSTSEIVERALTLREIC 629
           PR   P  N N R  ++++   R  NS    +P+QA L+ S IT  S+I ER LTLREIC
Sbjct: 23  PRALAPSLNSNRRTDSTVHFTRRVSNSNCNAKPAQATLNSSSITEASDIGERTLTLREIC 82

Query: 628 EGRVPEHILR----RAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIF 461
           +G VPEH++     R E+VGF VPT+VQ+Q+LP+LLSGRDCILHAQTGSGKTL YLLLIF
Sbjct: 83  QGCVPEHVIALICFRIEEVGFIVPTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIF 142

Query: 460 SVINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRH 281
           SV+N + SAVQALIVVPTRELG+QVTKVARMLAAKPME ELE K+CTVMALLDGGML+RH
Sbjct: 143 SVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRH 202

Query: 280 KSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTS 101
           KSWLKAEPPTIVVAT+ SLCQMLEK+IFKLE+M+VLVIDEVDFMFN+SKQV SLRKLLTS
Sbjct: 203 KSWLKAEPPTIVVATVRSLCQMLEKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTS 262

Query: 100 YSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           YSS N+RQTVFASASIPQH RFL+DCIQQKWTK
Sbjct: 263 YSSTNNRQTVFASASIPQHRRFLHDCIQQKWTK 295


>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
           gi|550329495|gb|EEF01963.2| hypothetical protein
           POPTR_0010s10230g [Populus trichocarpa]
          Length = 477

 Score =  379 bits (973), Expect = e-103
 Identities = 198/258 (76%), Positives = 219/258 (84%), Gaps = 3/258 (1%)
 Frame = -2

Query: 766 NSTSIYCRNRFLNSTIPRPSQAPLDVSCITSTSEIVER---ALTLREICEGRVPEHILRR 596
           N    Y R+ F      RP +A L+   +T  ++  +    ALTLREIC GRVPEH+LRR
Sbjct: 39  NRALFYSRSSF------RPLKAILNSPSLTKVADDAKEKGEALTLREICLGRVPEHLLRR 92

Query: 595 AEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFSVINVRRSAVQALIV 416
            E+VG+ VPT+VQ+Q+LP+L SGRDCILHAQTGSGKTLAYLLLIFSVIN +RSAVQALIV
Sbjct: 93  VEEVGYAVPTDVQKQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQALIV 152

Query: 415 VPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHKSWLKAEPPTIVVAT 236
           VPTRELG+QVTKVARMLAA P E + E K+CTVMALLDGGMLRRHKSWLKAEPPTIVVAT
Sbjct: 153 VPTRELGIQVTKVARMLAATPTENDAEQKSCTVMALLDGGMLRRHKSWLKAEPPTIVVAT 212

Query: 235 MGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSINSRQTVFASAS 56
           + SLCQMLEK + KLE+MQVLVIDEVDFMFNSSKQVSSLRKLLTSYSS NSRQTVFASAS
Sbjct: 213 IASLCQMLEKHLLKLESMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASAS 272

Query: 55  IPQHNRFLYDCIQQKWTK 2
           IPQHNRFLYDCIQQKWTK
Sbjct: 273 IPQHNRFLYDCIQQKWTK 290


>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
           gi|557521726|gb|ESR33093.1| hypothetical protein
           CICLE_v10004897mg [Citrus clementina]
          Length = 473

 Score =  364 bits (935), Expect = 2e-98
 Identities = 192/283 (67%), Positives = 230/283 (81%), Gaps = 6/283 (2%)
 Frame = -2

Query: 832 ITSTMNTNLPRFFFPIQNPNPRNSTSIYCRNR-FLNSTIP-RPSQAPLDVSCITSTSEIV 659
           I++T    + R    + +PN     SI   NR FL  +I  +P +A L  S + ST E+ 
Sbjct: 6   ISATHTILVTRVNHKLSSPN-----SIELTNRAFLPVSISWKPLRAVLSSSAV-STEELA 59

Query: 658 ----ERALTLREICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSG 491
                 +LTLRE+C+G VPEH+LRR ++ G+ +PT++QR++LP+L S RDCILHAQTGSG
Sbjct: 60  AGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSG 119

Query: 490 KTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMA 311
           KTL YLLLIFS++N +RSAVQA+IVVPTRELGMQVTKVAR+LAAKP + +LE K CTVMA
Sbjct: 120 KTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVMA 179

Query: 310 LLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQ 131
           LLDGGMLRRHKSWLKAEPPTIVVATMGSLCQ++EK IFKLE++QVLVIDEVDF+FNSSKQ
Sbjct: 180 LLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQ 239

Query: 130 VSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           VSSL+KLL SYSS N+RQTVFASASIPQH RFL+DCIQQKWTK
Sbjct: 240 VSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTK 282


>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 473

 Score =  360 bits (923), Expect = 5e-97
 Identities = 190/283 (67%), Positives = 229/283 (80%), Gaps = 6/283 (2%)
 Frame = -2

Query: 832 ITSTMNTNLPRFFFPIQNPNPRNSTSIYCRNR-FLNSTIP-RPSQAPLDVSCITSTSEIV 659
           I++T    + R    + +PN     SI   NR FL  +I  +P +A L  S + S  E+ 
Sbjct: 6   ISATHTILVTRVNHKLSSPN-----SIEFTNRAFLPVSISWKPLRAVLSSSAV-SIEELA 59

Query: 658 ----ERALTLREICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSG 491
                 +LTLRE+C+G VPEH+LRR ++ G+ +PT++QR++LP+L S RDCILHAQTGSG
Sbjct: 60  AGTGNNSLTLRELCQGHVPEHVLRRMDETGYVLPTDIQREALPVLFSSRDCILHAQTGSG 119

Query: 490 KTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMA 311
           KTL YLLLIFS++N +RSAVQA+IVVPTRELGMQVTKVAR+LAAKP + +LE K CTVMA
Sbjct: 120 KTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCTVMA 179

Query: 310 LLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQ 131
           LLDGGMLRRHKSWLKAEPPTIVVATMGSLCQ++EK IFKLE++QVLVIDEVDF+FNSSKQ
Sbjct: 180 LLDGGMLRRHKSWLKAEPPTIVVATMGSLCQLIEKHIFKLESVQVLVIDEVDFLFNSSKQ 239

Query: 130 VSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           VSSL+KLL SYSS N+RQTVFASASIPQH RFL++CIQQKWTK
Sbjct: 240 VSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTK 282


>ref|XP_007222883.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
           gi|462419819|gb|EMJ24082.1| hypothetical protein
           PRUPE_ppa005191mg [Prunus persica]
          Length = 473

 Score =  357 bits (917), Expect = 3e-96
 Identities = 190/264 (71%), Positives = 217/264 (82%)
 Frame = -2

Query: 793 FPIQNPNPRNSTSIYCRNRFLNSTIPRPSQAPLDVSCITSTSEIVERALTLREICEGRVP 614
           FP Q+ N  +S  ++  N F+++    P QA L+ + IT+ +       TLR+IC+  VP
Sbjct: 28  FPFQSLN--HSPRLFSSNGFVSNC--SPIQALLNSTPITTEAGSEPEPFTLRQICQSHVP 83

Query: 613 EHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFSVINVRRSA 434
           +H+L + E++GF VPT VQRQ+LP L SGRDCILHAQTGSGKTL YLLL+FS++N RRSA
Sbjct: 84  DHVLCKMEELGFVVPTPVQRQALPTLFSGRDCILHAQTGSGKTLTYLLLVFSIVNARRSA 143

Query: 433 VQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHKSWLKAEPP 254
           VQALIVVPTRELGMQVTKVARMLA KP E ELE K+CTVMALLDGGML RHKSWLKAEPP
Sbjct: 144 VQALIVVPTRELGMQVTKVARMLATKPKEGELEQKSCTVMALLDGGMLMRHKSWLKAEPP 203

Query: 253 TIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSINSRQT 74
           TIVVAT+GSLCQMLEK + KLEAM+VLVIDEVDFMF SSKQVSSLRKLLTSYSSIN+RQT
Sbjct: 204 TIVVATIGSLCQMLEKHMIKLEAMRVLVIDEVDFMF-SSKQVSSLRKLLTSYSSINTRQT 262

Query: 73  VFASASIPQHNRFLYDCIQQKWTK 2
           VFASASIPQH  FL  CIQQKWTK
Sbjct: 263 VFASASIPQHKIFLDKCIQQKWTK 286


>ref|XP_007034658.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 3 [Theobroma cacao]
           gi|508713687|gb|EOY05584.1| P-loop containing nucleoside
           triphosphate hydrolases superfamily protein isoform 3
           [Theobroma cacao]
          Length = 351

 Score =  355 bits (912), Expect = 1e-95
 Identities = 186/272 (68%), Positives = 221/272 (81%), Gaps = 10/272 (3%)
 Frame = -2

Query: 787 IQNPNPRNSTSIYC---RNRFLNSTIPRPSQAPLDVSCITSTSEIVER-------ALTLR 638
           I  P P+ +T  +    RNR+LN +      A    S   S S  + +       +LTLR
Sbjct: 15  ITAPYPKPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLR 74

Query: 637 EICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFS 458
           EIC+  VP+H+L R E++G+ +PT+VQR++LP+L SG DCILHAQTGSGKTL YLLLI+S
Sbjct: 75  EICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYS 134

Query: 457 VINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHK 278
           VIN +RSAVQALIVVPTRELGMQVTKVARMLAAKPM+ E+E K+ TVMALLDGGMLRRHK
Sbjct: 135 VINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHK 194

Query: 277 SWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSY 98
           SWLKAEPP IVVAT+GSL QMLEK+IFKL++M++LV+DEVDF+FNSSKQVSS+RKLLTSY
Sbjct: 195 SWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSY 254

Query: 97  SSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           SS N+RQTVFASASIPQH RFL+DCIQQKWTK
Sbjct: 255 SSCNNRQTVFASASIPQHRRFLHDCIQQKWTK 286


>ref|XP_007034657.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 2 [Theobroma cacao]
           gi|508713686|gb|EOY05583.1| P-loop containing nucleoside
           triphosphate hydrolases superfamily protein isoform 2
           [Theobroma cacao]
          Length = 409

 Score =  355 bits (912), Expect = 1e-95
 Identities = 186/272 (68%), Positives = 221/272 (81%), Gaps = 10/272 (3%)
 Frame = -2

Query: 787 IQNPNPRNSTSIYC---RNRFLNSTIPRPSQAPLDVSCITSTSEIVER-------ALTLR 638
           I  P P+ +T  +    RNR+LN +      A    S   S S  + +       +LTLR
Sbjct: 15  ITAPYPKPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLR 74

Query: 637 EICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFS 458
           EIC+  VP+H+L R E++G+ +PT+VQR++LP+L SG DCILHAQTGSGKTL YLLLI+S
Sbjct: 75  EICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYS 134

Query: 457 VINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHK 278
           VIN +RSAVQALIVVPTRELGMQVTKVARMLAAKPM+ E+E K+ TVMALLDGGMLRRHK
Sbjct: 135 VINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHK 194

Query: 277 SWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSY 98
           SWLKAEPP IVVAT+GSL QMLEK+IFKL++M++LV+DEVDF+FNSSKQVSS+RKLLTSY
Sbjct: 195 SWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSY 254

Query: 97  SSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           SS N+RQTVFASASIPQH RFL+DCIQQKWTK
Sbjct: 255 SSCNNRQTVFASASIPQHRRFLHDCIQQKWTK 286


>ref|XP_007034656.1| P-loop containing nucleoside triphosphate hydrolases superfamily
           protein isoform 1 [Theobroma cacao]
           gi|508713685|gb|EOY05582.1| P-loop containing nucleoside
           triphosphate hydrolases superfamily protein isoform 1
           [Theobroma cacao]
          Length = 477

 Score =  355 bits (912), Expect = 1e-95
 Identities = 186/272 (68%), Positives = 221/272 (81%), Gaps = 10/272 (3%)
 Frame = -2

Query: 787 IQNPNPRNSTSIYC---RNRFLNSTIPRPSQAPLDVSCITSTSEIVER-------ALTLR 638
           I  P P+ +T  +    RNR+LN +      A    S   S S  + +       +LTLR
Sbjct: 15  ITAPYPKPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLR 74

Query: 637 EICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFS 458
           EIC+  VP+H+L R E++G+ +PT+VQR++LP+L SG DCILHAQTGSGKTL YLLLI+S
Sbjct: 75  EICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQTGSGKTLTYLLLIYS 134

Query: 457 VINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHK 278
           VIN +RSAVQALIVVPTRELGMQVTKVARMLAAKPM+ E+E K+ TVMALLDGGMLRRHK
Sbjct: 135 VINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYTVMALLDGGMLRRHK 194

Query: 277 SWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSY 98
           SWLKAEPP IVVAT+GSL QMLEK+IFKL++M++LV+DEVDF+FNSSKQVSS+RKLLTSY
Sbjct: 195 SWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVDFIFNSSKQVSSIRKLLTSY 254

Query: 97  SSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           SS N+RQTVFASASIPQH RFL+DCIQQKWTK
Sbjct: 255 SSCNNRQTVFASASIPQHRRFLHDCIQQKWTK 286


>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
          Length = 464

 Score =  355 bits (910), Expect = 2e-95
 Identities = 187/268 (69%), Positives = 221/268 (82%), Gaps = 4/268 (1%)
 Frame = -2

Query: 793 FPIQNPNPRNSTSIYCRNRFLNSTIPRPSQAPLDV-SCITSTSEIV---ERALTLREICE 626
           F  +NPNP            L S+IPR   A   V + ++S ++ V   +RA TLR +CE
Sbjct: 24  FRFRNPNPS-----------LVSSIPRSPLAIRSVPNLLSSAADAVPDEQRAATLRRLCE 72

Query: 625 GRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFSVINV 446
           G VPEH++   E+VG+  PT+VQRQ+LPIL SGRDC+LHAQTGSGKTL YLLLIFSV+N 
Sbjct: 73  GLVPEHVV---EEVGYIEPTDVQRQALPILFSGRDCVLHAQTGSGKTLTYLLLIFSVVNT 129

Query: 445 RRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHKSWLK 266
           +RSAVQALIVVPTRELGMQVTKVAR LAAKPME +LE K+C+VMALLDGG LRRHKSWLK
Sbjct: 130 QRSAVQALIVVPTRELGMQVTKVARTLAAKPMESDLEQKSCSVMALLDGGTLRRHKSWLK 189

Query: 265 AEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSIN 86
           AEPPT+VVAT+GSLCQ L+K+I  LE+M+VLVIDEVDF+FNSSKQVSSLRKLLTSYS+I+
Sbjct: 190 AEPPTVVVATIGSLCQQLDKQILTLESMRVLVIDEVDFIFNSSKQVSSLRKLLTSYSTIS 249

Query: 85  SRQTVFASASIPQHNRFLYDCIQQKWTK 2
           +RQTVFASASIPQH RFL++C+QQKWTK
Sbjct: 250 NRQTVFASASIPQHRRFLHECVQQKWTK 277


>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  350 bits (899), Expect = 3e-94
 Identities = 174/231 (75%), Positives = 198/231 (85%)
 Frame = -2

Query: 694 DVSCITSTSEIVERALTLREICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCI 515
           DV   T T +      TLRE+C G VPEH++RR E+VG+ +PT VQ Q+LP L SGRDC+
Sbjct: 51  DVEARTETKD--SSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCV 108

Query: 514 LHAQTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELE 335
           LHAQTGSGKTLAYLL I SVI+ +RSAVQALIVVPTRELGMQVTKVARMLAAKP E+E  
Sbjct: 109 LHAQTGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESG 168

Query: 334 GKNCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVD 155
            K+CTVMALLDGGML RHKSWLKAEPPTIVVATMGSLCQMLEK I KL++ QVLV+DEVD
Sbjct: 169 PKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVD 228

Query: 154 FMFNSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           FMFNSSK++SSL++LLTSYS+  +RQT+FASASIPQH RFLYDC+QQKWTK
Sbjct: 229 FMFNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTK 279


>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 476

 Score =  350 bits (898), Expect = 4e-94
 Identities = 189/258 (73%), Positives = 210/258 (81%), Gaps = 10/258 (3%)
 Frame = -2

Query: 745 RNRFLNSTIPRPS-QAPLDVSCITSTSEIVERA---------LTLREICEGRVPEHILRR 596
           +NR L ST+     QA L+ S    T E  E           LTLRE+C+  VPE +L R
Sbjct: 39  KNRGLLSTLSFSHLQAVLNSSTSLITKEEEEEEQFDPKSNHFLTLRELCQNYVPEPVLHR 98

Query: 595 AEDVGFTVPTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFSVINVRRSAVQALIV 416
            E++G+ +PT+VQRQ+LP+L SG+DCILH QTGSGKTLAYLLLI+SVIN +RSAVQALI+
Sbjct: 99  MEEIGYVMPTDVQRQALPVLFSGQDCILHGQTGSGKTLAYLLLIYSVINAQRSAVQALII 158

Query: 415 VPTRELGMQVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHKSWLKAEPPTIVVAT 236
           VPTRELGMQVTKVARMLAAKPM+V       TVMALLDGGMLRRHKSWLKAEPP IVVAT
Sbjct: 159 VPTRELGMQVTKVARMLAAKPMDV-------TVMALLDGGMLRRHKSWLKAEPPKIVVAT 211

Query: 235 MGSLCQMLEKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSINSRQTVFASAS 56
           + SLCQMLEK IFKL++MQVLVIDEVDFMFNSSKQVSSLRKLLTSYSS NSRQTVFASAS
Sbjct: 212 IASLCQMLEKHIFKLDSMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASAS 271

Query: 55  IPQHNRFLYDCIQQKWTK 2
           IPQH RFLYDCIQQKWTK
Sbjct: 272 IPQHRRFLYDCIQQKWTK 289


>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Solanum tuberosum]
          Length = 462

 Score =  342 bits (878), Expect = 9e-92
 Identities = 171/240 (71%), Positives = 202/240 (84%), Gaps = 1/240 (0%)
 Frame = -2

Query: 718 PRPSQAPLDVSCITSTSEIVERALT-LREICEGRVPEHILRRAEDVGFTVPTNVQRQSLP 542
           P+P +     S + +T+   + + T LRE+C G V EH++RRAE+VG+ +PT VQ Q+LP
Sbjct: 33  PKPLRVSFSSSNVETTTLTKDSSTTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALP 92

Query: 541 ILLSGRDCILHAQTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLA 362
            L SGRDC+LHAQTGSGKTLAYLL + SV++ +RSAVQALIVVPTRELGMQVTKVARMLA
Sbjct: 93  FLFSGRDCVLHAQTGSGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLA 152

Query: 361 AKPMEVELEGKNCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAM 182
           A P E E   K+CTVMALLDGGML+RHKSWLKAEPPTIVVAT+GSLCQMLEK I KL+  
Sbjct: 153 ANPSEHESGLKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTC 212

Query: 181 QVLVIDEVDFMFNSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           QVLV+DEVDFMFNSSK+VSSL++LLTSYSS  +RQT+FASASIPQH RFLYDC+QQKWT+
Sbjct: 213 QVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTR 272


>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Solanum lycopersicum]
          Length = 459

 Score =  342 bits (878), Expect = 9e-92
 Identities = 171/240 (71%), Positives = 203/240 (84%), Gaps = 1/240 (0%)
 Frame = -2

Query: 718 PRPSQAPLDVSCITSTSEIVERALT-LREICEGRVPEHILRRAEDVGFTVPTNVQRQSLP 542
           P+PS+A    S + +T+   + + T LRE+C G V EH++ RAE++G+ +PT VQ Q+LP
Sbjct: 33  PKPSRASFSSSNVETTTLTKDSSTTTLRELCYGHVQEHVILRAEEIGYVMPTKVQLQALP 92

Query: 541 ILLSGRDCILHAQTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLA 362
            L SGRDC+LHAQTGSGKTLAYLL + SV++ +RSAVQALIVVPTRELGMQVTKVARMLA
Sbjct: 93  FLFSGRDCVLHAQTGSGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLA 152

Query: 361 AKPMEVELEGKNCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAM 182
           A P E E   K+CTVMALLDGGML+RHKSWLKAEPPTIVVAT+GSLCQMLEK I KL+  
Sbjct: 153 ANPSEHESGLKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATIGSLCQMLEKHILKLDTC 212

Query: 181 QVLVIDEVDFMFNSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           QVLV+DEVDFMFNSSK+VSSL++LLTSYSS  +RQT+FASASIPQH RFLYDC+QQKWT+
Sbjct: 213 QVLVVDEVDFMFNSSKEVSSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCMQQKWTR 272


>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Cucumis sativus]
           gi|449531697|ref|XP_004172822.1| PREDICTED: DEAD-box
           ATP-dependent RNA helicase 58, chloroplastic-like
           [Cucumis sativus]
          Length = 473

 Score =  341 bits (875), Expect = 2e-91
 Identities = 172/238 (72%), Positives = 200/238 (84%)
 Frame = -2

Query: 715 RPSQAPLDVSCITSTSEIVERALTLREICEGRVPEHILRRAEDVGFTVPTNVQRQSLPIL 536
           RP QA L  S + + +E    A TLREIC G VPEHILRR E++GF  PT+VQRQ+LP+L
Sbjct: 49  RPLQALLSSSSLKNVAESNFEASTLREICNGHVPEHILRRTEEIGFVAPTDVQRQALPVL 108

Query: 535 LSGRDCILHAQTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLAAK 356
            SGRDC+LHAQTGSGKTL YLLLIFSVIN ++SAVQALIVVPTRELGMQVTKVARMLAAK
Sbjct: 109 FSGRDCVLHAQTGSGKTLTYLLLIFSVINAKKSAVQALIVVPTRELGMQVTKVARMLAAK 168

Query: 355 PMEVELEGKNCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQV 176
           P   E    +  VMALLDGG+LRRHK+WLKA+PP I+VAT+GSLCQM+E++   L ++ V
Sbjct: 169 PAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNV 228

Query: 175 LVIDEVDFMFNSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           LVIDEVDFMF+SSKQVSSL+KLLTSYSS ++RQT+FASASIPQH  FL+DCIQQKWTK
Sbjct: 229 LVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLHDCIQQKWTK 286


>ref|XP_007153921.1| hypothetical protein PHAVU_003G0764001g, partial [Phaseolus
           vulgaris] gi|561027275|gb|ESW25915.1| hypothetical
           protein PHAVU_003G0764001g, partial [Phaseolus vulgaris]
          Length = 340

 Score =  341 bits (874), Expect = 3e-91
 Identities = 172/250 (68%), Positives = 206/250 (82%)
 Frame = -2

Query: 751 YCRNRFLNSTIPRPSQAPLDVSCITSTSEIVERALTLREICEGRVPEHILRRAEDVGFTV 572
           Y  N   NS    P +A LD S IT T+       TLRE+C+  VPEHIL+R ED+G+ +
Sbjct: 42  YTTNLNRNSKFRTP-EAVLDTSPITPTALTTP---TLRELCQAHVPEHILQRMEDIGYVM 97

Query: 571 PTNVQRQSLPILLSGRDCILHAQTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGM 392
           PT++QR++LP L SGRDCILHAQTGSGKTL YLLLI S+IN  +S+VQAL+VVPTRELGM
Sbjct: 98  PTDIQREALPYLFSGRDCILHAQTGSGKTLTYLLLINSIINAAKSSVQALVVVPTRELGM 157

Query: 391 QVTKVARMLAAKPMEVELEGKNCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQML 212
           QVTKVAR LAAKP  V  E K+C++MALLDGG L+RHK+WLKAEPPT+VVAT+GSLCQML
Sbjct: 158 QVTKVARTLAAKPTGVVGEHKSCSIMALLDGGTLKRHKTWLKAEPPTVVVATVGSLCQML 217

Query: 211 EKRIFKLEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFL 32
           E+  F LE ++VL++DEVD +FNSSKQVSSLRK+LTSYSS N+RQTVFASASIPQHNRF+
Sbjct: 218 ERHTFSLETVRVLIVDEVDCIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNRFI 277

Query: 31  YDCIQQKWTK 2
           +DC+QQKWTK
Sbjct: 278 HDCLQQKWTK 287


>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  341 bits (874), Expect = 3e-91
 Identities = 169/231 (73%), Positives = 195/231 (84%)
 Frame = -2

Query: 694 DVSCITSTSEIVERALTLREICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCI 515
           D+   T T +      T RE+C G VPEH++RR E+VG+ +PT VQ  +LP L SGRDC+
Sbjct: 51  DIEARTETKD--SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCV 108

Query: 514 LHAQTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELE 335
           LHAQTGSGKTLAYLL + SVI+ +RSAVQALIVVPTRELGMQVTKVAR LAAKP E++  
Sbjct: 109 LHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSG 168

Query: 334 GKNCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVD 155
            K+CTVMALLDGGML RHKSWLKAEPPTIVVATMGSLCQMLEK I KL++ QVLV+DEVD
Sbjct: 169 PKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVD 228

Query: 154 FMFNSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           FMFNSSK++SSL++LLTSYSS  +RQT+FASASIPQH RFLYDC+QQKWTK
Sbjct: 229 FMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTK 279


>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 365

 Score =  341 bits (874), Expect = 3e-91
 Identities = 169/231 (73%), Positives = 195/231 (84%)
 Frame = -2

Query: 694 DVSCITSTSEIVERALTLREICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCI 515
           D+   T T +      T RE+C G VPEH++RR E+VG+ +PT VQ  +LP L SGRDC+
Sbjct: 51  DIEARTETKD--SSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCV 108

Query: 514 LHAQTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELE 335
           LHAQTGSGKTLAYLL + SVI+ +RSAVQALIVVPTRELGMQVTKVAR LAAKP E++  
Sbjct: 109 LHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSG 168

Query: 334 GKNCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVD 155
            K+CTVMALLDGGML RHKSWLKAEPPTIVVATMGSLCQMLEK I KL++ QVLV+DEVD
Sbjct: 169 PKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQMLEKHILKLDSCQVLVVDEVD 228

Query: 154 FMFNSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
           FMFNSSK++SSL++LLTSYSS  +RQT+FASASIPQH RFLYDC+QQKWTK
Sbjct: 229 FMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTK 279


>ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabidopsis thaliana]
           gi|108861900|sp|Q3E9C3.1|RH58_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic; Flags: Precursor
           gi|332005287|gb|AED92670.1| DEAD-box ATP-dependent RNA
           helicase 58 [Arabidopsis thaliana]
          Length = 472

 Score =  333 bits (854), Expect = 5e-89
 Identities = 175/288 (60%), Positives = 219/288 (76%), Gaps = 2/288 (0%)
 Frame = -2

Query: 859 VTHLPFLTTIT--STMNTNLPRFFFPIQNPNPRNSTSIYCRNRFLNSTIPRPSQAPLDVS 686
           V HL F   I+  S  +T  P FF    + + R +      +R +N      + + ++ +
Sbjct: 8   VPHLAFFPKISYASVFSTLKPSFF---HSTSTRRALKSSPSSRIINLQAVAETSSEIESN 64

Query: 685 CITSTSEIVERALTLREICEGRVPEHILRRAEDVGFTVPTNVQRQSLPILLSGRDCILHA 506
            +T T+      LTLR+IC+G VPEHIL R E++GF  PT++QR++LP L +GRDCILHA
Sbjct: 65  SVTETTV----PLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHA 120

Query: 505 QTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVARMLAAKPMEVELEGKN 326
           QTGSGKTL YLLLIFS+IN +RS+VQA+IVVPTRELGMQVTKVARMLAAK    E++ K 
Sbjct: 121 QTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKS---EIDVKG 177

Query: 325 CTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFKLEAMQVLVIDEVDFMF 146
           CTVMALLDGG LRRHKSWLKAEPP I+VAT+ SLC MLEK IF++++++VLV+DEVDF+F
Sbjct: 178 CTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLF 237

Query: 145 NSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQKWTK 2
            SSKQV S+RKLLTS+SS + RQTVFASASIPQH  F++DCIQQKWTK
Sbjct: 238 YSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTK 285


>ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutrema salsugineum]
           gi|557101569|gb|ESQ41932.1| hypothetical protein
           EUTSA_v10013438mg [Eutrema salsugineum]
          Length = 473

 Score =  332 bits (852), Expect = 9e-89
 Identities = 169/244 (69%), Positives = 201/244 (82%), Gaps = 1/244 (0%)
 Frame = -2

Query: 730 NSTIPRPSQAPLDVSCITSTSEIVERA-LTLREICEGRVPEHILRRAEDVGFTVPTNVQR 554
           NS I    QA  D      ++ + E   LTLR ICEG VPEHI+ R E++GF  PTN+QR
Sbjct: 45  NSRITINLQAVADACSEIESNGVTETTDLTLRNICEGFVPEHIIHRMEEIGFVFPTNIQR 104

Query: 553 QSLPILLSGRDCILHAQTGSGKTLAYLLLIFSVINVRRSAVQALIVVPTRELGMQVTKVA 374
           ++LP L +GRDCILHAQTGSGKTL YLLLIFS+IN +RS+VQA+IVVPTRELGMQVTKVA
Sbjct: 105 EALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVA 164

Query: 373 RMLAAKPMEVELEGKNCTVMALLDGGMLRRHKSWLKAEPPTIVVATMGSLCQMLEKRIFK 194
           RMLAAK  ++E++G  CTVMALLDGGMLRRHKSWLKAEPP IVVAT+ SLC MLEK I +
Sbjct: 165 RMLAAKSTDIEVKG--CTVMALLDGGMLRRHKSWLKAEPPAIVVATVASLCHMLEKHILR 222

Query: 193 LEAMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSINSRQTVFASASIPQHNRFLYDCIQQ 14
           L++++VLV+DEVDF+F SSKQV S+RKLLT++SS + RQTVFASASIPQH  F++DCIQQ
Sbjct: 223 LDSVRVLVVDEVDFLFYSSKQVGSVRKLLTTFSSCDKRQTVFASASIPQHKHFVHDCIQQ 282

Query: 13  KWTK 2
           KWTK
Sbjct: 283 KWTK 286