BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00027310
         (336 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 70   4e-10
gb|AAT39281.2| Integrase core domain containing protein [Solanum...    60   3e-07
gb|AAB82754.1| retrofit [Oryza longistaminata]                         59   5e-07
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    59   7e-07
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...    57   3e-06
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                   57   3e-06
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]    55   8e-06

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
 Frame = -2

Query: 335  IRGKSTMQMLFHGCSEHGLYPFHXXXXXXXXXXXXXXXXXX*--------HN*FGHPNSR 180
            ++  ST +MLF G SE GLYPF+                           H   GHP+  
Sbjct: 683  VKDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGG 742

Query: 179  IFHSLLHTLNVSSSGL--NQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHMDVRGPSPT 6
              HS++H  ++   G   N  +CT C + KS+RLSF+    +   PLQ++H DV GPSPT
Sbjct: 743  TLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDVWGPSPT 802


>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
 Frame = -2

Query: 335 IRGKSTMQMLFHGCSEHGLYPFHXXXXXXXXXXXXXXXXXX*HN*FGHPNSRIFHSLLHT 156
           ++  ST   LF G +  GLY +                    H   GHPN R  + + H 
Sbjct: 401 VKDLSTGAPLFRGQNRDGLYEWPLGSAHHTPQCNVVVPLHLWHRRLGHPNHRTLNMIFHQ 460

Query: 155 LNVS-SSGLNQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHMDVRGPSP 9
            ++  S      +C  C  +K HRL F+E+    Q PLQI++ D+ GPSP
Sbjct: 461 FSLPVSHSRTASICNSCYSNKMHRLPFSENSLQSQRPLQIIYTDLWGPSP 510


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
 Frame = -2

Query: 335 IRGKSTMQMLFHGCSEHGLYP---FHXXXXXXXXXXXXXXXXXX*HN*FGHPNSRIFHSL 165
           I+ + T  +L  G   HGLYP   F                    H+  GHP+  I   +
Sbjct: 413 IKDQVTRDVLLEGKCRHGLYPIPKFFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 472

Query: 164 LHTLNVSSS--GLNQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHMDVRGPSP 9
           +   N+  S   +NQ +C  C  +KSH+L +  S +  QFPL++V  DV GP+P
Sbjct: 473 ISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP 526


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
 Frame = -2

Query: 335 IRGKSTMQMLFHGCSEHGLYP------FHXXXXXXXXXXXXXXXXXX*HN*FGHPNSRIF 174
           ++   T ++L  G  E+GLYP      FH                   H+  GHP+S IF
Sbjct: 413 VKENLTGRILLQGVVENGLYPLAGCKTFHKSLTCLSTTIGVRANADTWHSRLGHPSSVIF 472

Query: 173 HSLLHT--LNVSSSGLNQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHMDV 24
           +SL H+  L+V  S      C+ C + K+ +L F ES      PL ++H DV
Sbjct: 473 NSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSDV 524


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
 Frame = -2

Query: 335 IRGKSTMQMLFHGCSEHGLYPF---HXXXXXXXXXXXXXXXXXX*HN*FGHPNSRIFHSL 165
           I+ + T  +L  G   HGLYP                        H+  GHP+  I   +
Sbjct: 417 IKDQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 476

Query: 164 LHTLNVSSS--GLNQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHMDVRGPSP 9
           +   N+  S   +NQ +C  C  +KSH+L +  S +  QFPL++V  DV GP+P
Sbjct: 477 ISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP 530


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
 Frame = -2

Query: 335 IRGKSTMQMLFHGCSEHGLYPF---HXXXXXXXXXXXXXXXXXX*HN*FGHPNSRIFHSL 165
           I+ + T  +L  G   HGLYP                        H+  GHP+  I   +
Sbjct: 417 IKDQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 476

Query: 164 LHTLNVSSS--GLNQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHMDVRGPSP 9
           +   N+  S   +NQ +C  C  +KSH+L +  S +  QFPL++V  DV GP+P
Sbjct: 477 ISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP 530


>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
          Length = 1099

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/65 (36%), Positives = 38/65 (58%)
 Frame = -2

Query: 209 HN*FGHPNSRIFHSLLHTLNVSSSGLNQFLCTECSMSKSHRLSFNESKNSVQFPLQIVHM 30
           HN  GHP+  + + +LH++++S S  +Q  C  C + K H+ SF         PLQ++H+
Sbjct: 299 HNRLGHPSXSVLNKILHSMSISPSS-HQMFCDACKLGKLHQESFLSVAVKTNKPLQLIHL 357

Query: 29  DVRGP 15
           DV GP
Sbjct: 358 DVWGP 362