BLASTX nr result

ID: Akebia23_contig00025755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00025755
         (447 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605459.1| Splicing factor U2af large subunit B [Medica...    58   1e-06
emb|CBI35712.3| unnamed protein product [Vitis vinifera]               46   2e-06

>ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355506514|gb|AES87656.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 634

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -1

Query: 138 AMLGYLSHCAANGREPTTVAFMYKKESMHRF 46
           AMLGYL HCA NGREPT+VAFM K+ESMHRF
Sbjct: 207 AMLGYLPHCADNGREPTSVAFMSKEESMHRF 237


>emb|CBI35712.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = -3

Query: 79  FYVQEGINAPV*WILFVFNRQLLPF 5
           +YVQ G NAP+ WILF FNRQLLPF
Sbjct: 80  YYVQPGTNAPISWILFAFNRQLLPF 104



 Score = 31.6 bits (70), Expect(2) = 2e-06
 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 4/22 (18%)
 Frame = -1

Query: 150 CCK----KAMLGYLSHCAANGR 97
           CC+    +AMLGY+SHCA +GR
Sbjct: 54  CCQVPLSQAMLGYMSHCATHGR 75


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