BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00023467
         (1659 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   629   e-178
emb|CBI21810.3| unnamed protein product [Vitis vinifera]              627   e-177
ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phas...   623   e-176
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   614   e-173
ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prun...   614   e-173
gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus not...   613   e-173
ref|XP_007022303.1| RecA DNA recombination family protein isofor...   611   e-172
ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1...   608   e-171
ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1...   608   e-171
ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa...   607   e-171
ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1...   605   e-170
ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1...   605   e-170
ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citr...   605   e-170
ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [A...   600   e-169
ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1...   598   e-168
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   598   e-168
ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG3...   598   e-168
ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group] g...   598   e-168
ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1...   595   e-167
ref|XP_003562019.1| PREDICTED: DNA repair protein recA homolog 1...   595   e-167

>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Vitis vinifera]
          Length = 415

 Score =  629 bits (1623), Expect = e-178
 Identities = 321/404 (79%), Positives = 351/404 (86%), Gaps = 6/404 (1%)
 Frame = +3

Query: 180  HFP-----PLRFPISRLRSWPVFNAGKQA-KVRCEFEVKGNGALSGETDPRFIDRQKALE 341
            HFP     P  FP S L   P   A +Q  ++RCEFEVK NGALS + DPRF+DRQKALE
Sbjct: 12   HFPLKTLLPSAFPSSSLP--PHMGAKRQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALE 69

Query: 342  AAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGK 521
            AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD+ALGGGLPKGRIVEI+GPESSGK
Sbjct: 70   AAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGK 129

Query: 522  TTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRM 701
            TTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPD+GEMALE ADRM
Sbjct: 130  TTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRM 189

Query: 702  CRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFL 881
            CRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFL
Sbjct: 190  CRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFL 249

Query: 882  NQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXX 1061
            NQIRYKIGV+YGNPEVTSGGIALKFFASLRLEIR +GKIKS KGDEDIG           
Sbjct: 250  NQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSK 309

Query: 1062 XXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLR 1241
               PYKQAEFEIIFGEGVSKLGCILDCAE+MD++VKKGSWYSYGD RLGQGRD+ALQYLR
Sbjct: 310  VSRPYKQAEFEIIFGEGVSKLGCILDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLR 369

Query: 1242 EDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            E+PL+C +IEK+VR  MAE  GQ+G  +++ SP    ++ + +E
Sbjct: 370  ENPLVCHEIEKIVRPMMAEGIGQLGAPHVRLSPTSPEDEDILEE 413


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  627 bits (1616), Expect = e-177
 Identities = 311/377 (82%), Positives = 341/377 (90%)
 Frame = +3

Query: 243  KQAKVRCEFEVKGNGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVE 422
            +Q ++RCEFEVK NGALS + DPRF+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVE
Sbjct: 6    QQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVE 65

Query: 423  TFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 602
            TFPSGCLTLD+ALGGGLPKGRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF
Sbjct: 66   TFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 125

Query: 603  DPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEI 782
            DPAYS+ALGVD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEI
Sbjct: 126  DPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEI 185

Query: 783  GMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFA 962
            GMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFA
Sbjct: 186  GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 245

Query: 963  SLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDC 1142
            SLRLEIR +GKIKS KGDEDIG              PYKQAEFEIIFGEGVSKLGCILDC
Sbjct: 246  SLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDC 305

Query: 1143 AEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLS 1322
            AE+MD++VKKGSWYSYGD RLGQGRD+ALQYLRE+PL+C +IEK+VR  MAE  GQ+G  
Sbjct: 306  AELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAP 365

Query: 1323 YMKQSPLLENEDQVFDE 1373
            +++ SP    ++ + +E
Sbjct: 366  HVRLSPTSPEDEDILEE 382


>ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phaseolus vulgaris]
            gi|561006319|gb|ESW05313.1| hypothetical protein
            PHAVU_011G169700g [Phaseolus vulgaris]
          Length = 415

 Score =  623 bits (1607), Expect = e-176
 Identities = 322/422 (76%), Positives = 352/422 (83%), Gaps = 2/422 (0%)
 Frame = +3

Query: 117  MEAFFPLKTHHCY-HFQTHPTLHFP-PLRFPISRLRSWPVFNAGKQAKVRCEFEVKGNGA 290
            M+  FPLK H          +L FP PLRF            A K A ++CE E + NGA
Sbjct: 1    MDLMFPLKPHSVILKAPLFSSLLFPLPLRFR--------AVTAFKHANIQCELEGRPNGA 52

Query: 291  LSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGG 470
            LSG+ DPRFIDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG
Sbjct: 53   LSGDFDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGG 112

Query: 471  LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLI 650
            LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLI
Sbjct: 113  LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLI 172

Query: 651  VCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 830
            VCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL
Sbjct: 173  VCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 232

Query: 831  RKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVK 1010
            RKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASLRLE+R  GKIKS K
Sbjct: 233  RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPAGKIKSAK 292

Query: 1011 GDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSY 1190
            GDE+IG              PYK AEFEIIFGEG+SKLGCILDCAEM DI++KKGSWYSY
Sbjct: 293  GDEEIGLKVRLRVQKSKVSRPYKLAEFEIIFGEGISKLGCILDCAEMTDIVLKKGSWYSY 352

Query: 1191 GDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFD 1370
            GD RLGQGRDKA+QYL+E+  L  +IEKVVRS + + + Q  L++MK SP+L  +D +F+
Sbjct: 353  GDHRLGQGRDKAIQYLKENTNLLEEIEKVVRSSLVDGSNQASLAHMKNSPVLHEDDDIFE 412

Query: 1371 ET 1376
            E+
Sbjct: 413  ES 414


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Glycine max]
          Length = 414

 Score =  614 bits (1584), Expect = e-173
 Identities = 320/422 (75%), Positives = 349/422 (82%), Gaps = 3/422 (0%)
 Frame = +3

Query: 117  MEAFFPLKTHHCYHFQT--HPTLHFP-PLRFPISRLRSWPVFNAGKQAKVRCEFEVKGNG 287
            M+  FPLK H C   +     +L FP PLRF            A K A ++CE E + NG
Sbjct: 1    MDLMFPLKPH-CVILKAPLSSSLLFPFPLRFR--------AVTAFKHANIQCELEGRPNG 51

Query: 288  ALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGG 467
            ALSG+ DPRFIDRQKALEAAMNDINN+FGKGSVTRLGSAGGALVETFPSGCLTLD ALGG
Sbjct: 52   ALSGDFDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGG 111

Query: 468  GLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENL 647
            GLPKGRI+EI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENL
Sbjct: 112  GLPKGRIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENL 171

Query: 648  IVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 827
            IVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA
Sbjct: 172  IVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQA 231

Query: 828  LRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSV 1007
            LRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASLRLE+R  GKIKS 
Sbjct: 232  LRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKSA 291

Query: 1008 KGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYS 1187
            KGDE+IG              PYK AEFEIIFGEG+SKLGCILDCAEM DI+ KKGSWYS
Sbjct: 292  KGDEEIGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYS 351

Query: 1188 YGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVF 1367
            YGD RLGQGRDKA+QYL+E+  L  +IEKVVRS + + T Q    +MK S +L  +D +F
Sbjct: 352  YGDHRLGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMF 411

Query: 1368 DE 1373
            +E
Sbjct: 412  EE 413


>ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prunus persica]
            gi|462411678|gb|EMJ16727.1| hypothetical protein
            PRUPE_ppa007080mg [Prunus persica]
          Length = 383

 Score =  614 bits (1583), Expect = e-173
 Identities = 307/374 (82%), Positives = 334/374 (89%)
 Frame = +3

Query: 252  KVRCEFEVKGNGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFP 431
            +VRCE + K NGALS ++DPRFIDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFP
Sbjct: 8    RVRCELQAKVNGALSADSDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 67

Query: 432  SGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 611
            SGCLTLD ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA
Sbjct: 68   SGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 127

Query: 612  YSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 791
            YS+ALGVD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 128  YSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 187

Query: 792  QIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLR 971
            Q+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+R
Sbjct: 188  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 247

Query: 972  LEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEM 1151
            LEIRS GKIKSVKGDE+IG              PYKQAEFEI+FGEGV KLGCILDCAE 
Sbjct: 248  LEIRSTGKIKSVKGDEEIGVRVRVRVQKSKVSRPYKQAEFEIVFGEGVGKLGCILDCAET 307

Query: 1152 MDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMK 1331
            MD++VKKGSWYSYGD RLGQGRDKALQYLRE+PLL  +IEK+VRS + + TGQVG  +  
Sbjct: 308  MDVVVKKGSWYSYGDHRLGQGRDKALQYLRENPLLLDEIEKIVRSMITDGTGQVGTLHTS 367

Query: 1332 QSPLLENEDQVFDE 1373
               + + ++  F++
Sbjct: 368  NLQIPQQDEDDFED 381


>gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus notabilis]
          Length = 438

 Score =  613 bits (1580), Expect = e-173
 Identities = 322/438 (73%), Positives = 354/438 (80%), Gaps = 18/438 (4%)
 Frame = +3

Query: 117  MEAFFPLK--THHCYHFQTHPTLHFPPLRF-------PISRLRSWPVFNAGKQAKVRCEF 269
            ME  FP    T H +   T  T   PP  +         S LR   V +     ++RCEF
Sbjct: 1    MELLFPPSKLTPH-FRSSTSTTRFLPPSLYLPSSSSSSASSLRRRSVSSPSAIRRIRCEF 59

Query: 270  EVKGNGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTL 449
            + K NGAL GE DPRF+DRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTL
Sbjct: 60   DAKINGALPGEFDPRFLDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTL 119

Query: 450  DYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALG 629
            D ALGGGLP+GRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALG
Sbjct: 120  DLALGGGLPRGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALG 179

Query: 630  VDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQA 809
            VD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQA
Sbjct: 180  VDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQA 239

Query: 810  RLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSM 989
            RLMSQALRKMSGNASKA CTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS 
Sbjct: 240  RLMSQALRKMSGNASKACCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRST 299

Query: 990  GKIKSVKGDEDIG---------XXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDC 1142
            GKIKSVKGDE+IG                       PYKQAEFEIIFGEGVSKLGC+LDC
Sbjct: 300  GKIKSVKGDEEIGLRVRVRIQKSKKGINKFPSQVSRPYKQAEFEIIFGEGVSKLGCVLDC 359

Query: 1143 AEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLS 1322
            AE+MD+I KKGSWYSYGD RLGQGRD++LQYLRE+PLL  +IEK+VRSK+AE TGQ G  
Sbjct: 360  AEIMDVIAKKGSWYSYGDHRLGQGRDRSLQYLRENPLLLDEIEKIVRSKLAEGTGQTGFL 419

Query: 1323 YMKQSPLLENEDQVFDET 1376
              +   L + ++ V++E+
Sbjct: 420  QPRSLSLPQEDEDVYEES 437


>ref|XP_007022303.1| RecA DNA recombination family protein isoform 1 [Theobroma cacao]
            gi|508721931|gb|EOY13828.1| RecA DNA recombination family
            protein isoform 1 [Theobroma cacao]
          Length = 485

 Score =  611 bits (1576), Expect = e-172
 Identities = 319/423 (75%), Positives = 352/423 (83%), Gaps = 7/423 (1%)
 Frame = +3

Query: 126  FFP--LKTHHCY-----HFQTHPTLHFPPLRFPISRLRSWPVFNAGKQAKVRCEFEVKGN 284
            FFP  LK HH Y     HF+  P L    L  P++ ++        +  KV CEFE + N
Sbjct: 71   FFPFKLKLHHRYLPLQNHFRQRPPLTSSHL--PLAAVKK-------RLRKVHCEFEPRVN 121

Query: 285  GALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALG 464
            GALS  +D RF+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALG
Sbjct: 122  GALSPNSDSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG 181

Query: 465  GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIEN 644
            GGLPKGRIVE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+EN
Sbjct: 182  GGLPKGRIVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVEN 241

Query: 645  LIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 824
            LIVCQPDNGEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQ
Sbjct: 242  LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQ 301

Query: 825  ALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKS 1004
            ALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIR  GKIKS
Sbjct: 302  ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPSGKIKS 361

Query: 1005 VKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWY 1184
            VKGDEDIG              PYKQAEFEIIFGEGVSKLGCILDCAEMMD++VKKGSWY
Sbjct: 362  VKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEMMDVVVKKGSWY 421

Query: 1185 SYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQV 1364
            SYG+ RLGQGRDKALQYLR++P+L  +IEK+VRS MA+ T  +  + +K   L   ++  
Sbjct: 422  SYGEHRLGQGRDKALQYLRDNPVLHGEIEKIVRSMMADGTLHMSSAPVKSLSLPPQDENN 481

Query: 1365 FDE 1373
            ++E
Sbjct: 482  YEE 484


>ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Setaria italica]
          Length = 417

 Score =  608 bits (1569), Expect = e-171
 Identities = 310/401 (77%), Positives = 343/401 (85%), Gaps = 5/401 (1%)
 Frame = +3

Query: 186  PPLRFPISRLRSWPVFNAG----KQAKVRCEFEVKG-NGALSGETDPRFIDRQKALEAAM 350
            P +   I R R  P  +AG    +  ++RCEF   G NGALSGE DPR +DRQKAL+AAM
Sbjct: 17   PSISTRIRRRRPAPRASAGGVTARARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAM 76

Query: 351  NDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTL 530
            +DINNSFGKGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTL
Sbjct: 77   SDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTL 136

Query: 531  ALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRS 710
            ALHAIAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRS
Sbjct: 137  ALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRS 196

Query: 711  GAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQI 890
            GAIDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQI
Sbjct: 197  GAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQI 256

Query: 891  RYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXX 1070
            RYKIGVFYGNPEVTSGGIALKFFAS+RLEIRS GKIKS KGDED+G              
Sbjct: 257  RYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSAKGDEDVGVKVRVRVQKSKVSR 316

Query: 1071 PYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDP 1250
            PYKQAEFEIIFGEGVSKLGC+LDCAE+M+++ KKGSWYSY D RLGQGR+KALQYLRE+P
Sbjct: 317  PYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKDMRLGQGREKALQYLRENP 376

Query: 1251 LLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
             +C +IEKVVR+ + E T  + L    QS L E +DQV+DE
Sbjct: 377  TICDEIEKVVRAMIPEGTRHMSLLAFGQSSLTE-DDQVYDE 416


>ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 418

 Score =  608 bits (1569), Expect = e-171
 Identities = 315/420 (75%), Positives = 348/420 (82%), Gaps = 1/420 (0%)
 Frame = +3

Query: 117  MEAFFPLKTHHCYHFQTHPTLHFPPLRFPISRLRSWPVFNAGKQAKVRCEFEVKGNGALS 296
            M   F   +    H+ + PT    PL F    L       +    +VR E +VK NGALS
Sbjct: 1    MGLLFRTSSSSMTHYMSTPT----PLLFHSCSLPQRFNLQSMAAKRVRSELQVKVNGALS 56

Query: 297  -GETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGL 473
              ++D  F+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGL
Sbjct: 57   TADSDSLFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGL 116

Query: 474  PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIV 653
            PKGRIVEIFGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYS+ALGVD+ENLIV
Sbjct: 117  PKGRIVEIFGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKALGVDVENLIV 176

Query: 654  CQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 833
            CQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALR
Sbjct: 177  CQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR 236

Query: 834  KMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKG 1013
            KMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS GKIKSVKG
Sbjct: 237  KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 296

Query: 1014 DEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYG 1193
            DE+IG              PYKQAEFEI+FGEGVSKLGCILDCAEMMD+IVKKGSWYSYG
Sbjct: 297  DEEIGVRVRVRVQKSKVSRPYKQAEFEIVFGEGVSKLGCILDCAEMMDVIVKKGSWYSYG 356

Query: 1194 DQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            D RLGQGRDK+LQYLRE+P+L  +IEK+VRS M + TGQVG  + +  P+   ++  F++
Sbjct: 357  DHRLGQGRDKSLQYLRENPVLLDEIEKIVRSTMTDATGQVGSFHTRHLPVTHQDEDDFED 416


>ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa]
            gi|550349661|gb|ERP67037.1| DNA repair protein recA
            [Populus trichocarpa]
          Length = 427

 Score =  607 bits (1566), Expect = e-171
 Identities = 317/420 (75%), Positives = 349/420 (83%), Gaps = 6/420 (1%)
 Frame = +3

Query: 132  PLKTHHCYHFQTHPTLHFP--PLRFPISRLRSWPVFNAG---KQAKVRCEFEVKGNGA-L 293
            P+ T H  HF +  T   P  PL F  SR+       A    K  ++RCEF+ K NG+ L
Sbjct: 9    PITTIH--HFPSKSTPFHPSLPLYFQFSRVCFKTSHFAAVKKKPKEIRCEFDSKVNGSPL 66

Query: 294  SGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGL 473
            S + D RF+D+QKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLD+ALGGGL
Sbjct: 67   SSDLDARFLDKQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGL 126

Query: 474  PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIV 653
            PKGRIVEIFGPESSGKTTLALHAIAEVQK GG+AMLVDAEHAFDPAYS+ALGVD+ENLIV
Sbjct: 127  PKGRIVEIFGPESSGKTTLALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVENLIV 186

Query: 654  CQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 833
            CQPDNGEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR
Sbjct: 187  CQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 246

Query: 834  KMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKG 1013
            KMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS GKIKSVKG
Sbjct: 247  KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 306

Query: 1014 DEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYG 1193
            DED+G              PYKQAEFEIIFGEGVS+LGCILDCAEMMD++VKKGSWYSYG
Sbjct: 307  DEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSWYSYG 366

Query: 1194 DQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            D RLGQGRDKALQYLR++P L  +IEK VRS M + T  +G    +  P+   ++ V+D+
Sbjct: 367  DHRLGQGRDKALQYLRDNPHLQEEIEKKVRSTMTDGTVNMGTPQARNMPVPLQDENVYDD 426


>ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Citrus sinensis]
          Length = 440

 Score =  605 bits (1561), Expect = e-170
 Identities = 313/415 (75%), Positives = 344/415 (82%)
 Frame = +3

Query: 129  FPLKTHHCYHFQTHPTLHFPPLRFPISRLRSWPVFNAGKQAKVRCEFEVKGNGALSGETD 308
            F +KTH C    +   LH    R       S       +  K+ CEF+ K NG  S   D
Sbjct: 26   FNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGD 85

Query: 309  PRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRI 488
             RF+DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRI
Sbjct: 86   SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRI 145

Query: 489  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDN 668
            VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPDN
Sbjct: 146  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDN 205

Query: 669  GEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 848
            GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN
Sbjct: 206  GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265

Query: 849  ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIG 1028
            ASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS GKIKSVKGDED+G
Sbjct: 266  ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325

Query: 1029 XXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLG 1208
                          PYKQAEFEIIFGEGVSKLGC+LDCAEMMDI+V+KG+WYSYGDQRLG
Sbjct: 326  VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385

Query: 1209 QGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            QGRDKALQYLR++PLL  +IEKVVRS M++ +   G S+++   L   ++ + +E
Sbjct: 386  QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQG-SFLRNVSLPNQDENILEE 439


>ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            isoform 1 [Brachypodium distachyon]
          Length = 412

 Score =  605 bits (1561), Expect = e-170
 Identities = 306/397 (77%), Positives = 338/397 (85%), Gaps = 1/397 (0%)
 Frame = +3

Query: 186  PPLRFPISRLRSWPVFNAGKQAKVRCEFEVK-GNGALSGETDPRFIDRQKALEAAMNDIN 362
            P  R  +S  R+      G+  ++RCEF    GNGALSGE DPR IDRQKAL+AAMNDIN
Sbjct: 16   PRPRRRVSATRASASGTTGRGRRLRCEFVASVGNGALSGEDDPRLIDRQKALDAAMNDIN 75

Query: 363  NSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHA 542
            NSFGKGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHA
Sbjct: 76   NSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHA 135

Query: 543  IAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAID 722
            IAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAID
Sbjct: 136  IAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAID 195

Query: 723  LICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKI 902
            LIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKI
Sbjct: 196  LICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKI 255

Query: 903  GVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQ 1082
            GVFYGNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDED+G              PYKQ
Sbjct: 256  GVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQ 315

Query: 1083 AEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCS 1262
            AEFEI+FGEGVSKLGCILDCAE+M+++ KKGSWYSY D RLGQGR+KALQYLRE P +C 
Sbjct: 316  AEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICD 375

Query: 1263 DIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            +IEKVVR+ + E T  + L    QS     E++V+DE
Sbjct: 376  EIEKVVRAMIPEGTRHMTLLAFGQSSSPTEEEEVYDE 412


>ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citrus clementina]
            gi|557543284|gb|ESR54262.1| hypothetical protein
            CICLE_v10020181mg [Citrus clementina]
          Length = 440

 Score =  605 bits (1559), Expect = e-170
 Identities = 313/415 (75%), Positives = 344/415 (82%)
 Frame = +3

Query: 129  FPLKTHHCYHFQTHPTLHFPPLRFPISRLRSWPVFNAGKQAKVRCEFEVKGNGALSGETD 308
            F +KTH C    +   LH    R       S       +  K+ CEF+ K NG  S   D
Sbjct: 26   FNMKTHLCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGD 85

Query: 309  PRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRI 488
             RF+DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRI
Sbjct: 86   SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRI 145

Query: 489  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDN 668
            VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YS+ALGVD+ENLIVCQPDN
Sbjct: 146  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205

Query: 669  GEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 848
            GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN
Sbjct: 206  GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265

Query: 849  ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIG 1028
            ASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS GKIKSVKGDED+G
Sbjct: 266  ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325

Query: 1029 XXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLG 1208
                          PYKQAEFEIIFGEGVSKLGC+LDCAEMMDI+V+KG+WYSYGDQRLG
Sbjct: 326  VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385

Query: 1209 QGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            QGRDKALQYLR++PLL  +IEKVVRS M++ +   G S+++   L   E+ + +E
Sbjct: 386  QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQG-SFLRNVSLPNQEENILEE 439


>ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [Amborella trichopoda]
            gi|548838911|gb|ERM99246.1| hypothetical protein
            AMTR_s00092p00136000 [Amborella trichopoda]
          Length = 406

 Score =  600 bits (1546), Expect = e-169
 Identities = 310/400 (77%), Positives = 339/400 (84%), Gaps = 2/400 (0%)
 Frame = +3

Query: 183  FPPLRFPI--SRLRSWPVFNAGKQAKVRCEFEVKGNGALSGETDPRFIDRQKALEAAMND 356
            FP  +FP+  S LR    F    + + RC+ E KGNGAL  + D R +DRQKALEAAMND
Sbjct: 12   FPVNKFPLVCSNLR----FERILRVRFRCDAEAKGNGALFSDADSRSVDRQKALEAAMND 67

Query: 357  INNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLAL 536
            INNSFGKGSVTRLGSAGGALVETF SGCLTLD ALGGGLPKGRIVEI+GPESSGKTTLAL
Sbjct: 68   INNSFGKGSVTRLGSAGGALVETFSSGCLTLDLALGGGLPKGRIVEIYGPESSGKTTLAL 127

Query: 537  HAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGA 716
            HA+AEVQKLGGNAMLVDAEHAFDPAYSR+LGVD+ENLIVCQPDNGEMALETADRMCRSGA
Sbjct: 128  HAMAEVQKLGGNAMLVDAEHAFDPAYSRSLGVDVENLIVCQPDNGEMALETADRMCRSGA 187

Query: 717  IDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 896
            +DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRY
Sbjct: 188  VDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 247

Query: 897  KIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPY 1076
            KIGVFYGNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDEDIG              PY
Sbjct: 248  KIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSPKGDEDIGVKVRVRVQKSKVSRPY 307

Query: 1077 KQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLL 1256
            KQAEF+IIFGEGV  LGCILDCAEMMDI+ +KGSWYSY D RLGQGRDKALQYLRE+PLL
Sbjct: 308  KQAEFDIIFGEGVGNLGCILDCAEMMDIVSRKGSWYSYSDLRLGQGRDKALQYLRENPLL 367

Query: 1257 CSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDET 1376
            C+++EK VRS M++  GQ G +         +ED +++ET
Sbjct: 368  CTELEKGVRSAMSDGLGQ-GFAAPLGHLAPRDEDPIYEET 406


>ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like,
            partial [Oryza brachyantha]
          Length = 371

 Score =  598 bits (1543), Expect = e-168
 Identities = 302/372 (81%), Positives = 327/372 (87%), Gaps = 1/372 (0%)
 Frame = +3

Query: 261  CEFEVKG-NGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSG 437
            CEF   G NGALSGE DPR IDRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETFPSG
Sbjct: 1    CEFVAGGGNGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSG 60

Query: 438  CLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 617
            CLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS
Sbjct: 61   CLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 120

Query: 618  RALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQI 797
            +ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQ+
Sbjct: 121  KALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQM 180

Query: 798  GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLE 977
            GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFAS+RLE
Sbjct: 181  GLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLE 240

Query: 978  IRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMD 1157
            IR +GKIKS KGDED+G              PYKQAEFEIIFGEGVSKLGC+LDCAE+M+
Sbjct: 241  IRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELME 300

Query: 1158 IIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQS 1337
            ++ KKGSWYSY D RLGQGR+KALQYLRE P +C +IEK VR+ + E T    L    QS
Sbjct: 301  VVAKKGSWYSYKDMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGTRHESLLAFGQS 360

Query: 1338 PLLENEDQVFDE 1373
             L E E+QV+DE
Sbjct: 361  SLTE-EEQVYDE 371


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
            gi|241920620|gb|EER93764.1| hypothetical protein
            SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  598 bits (1543), Expect = e-168
 Identities = 306/393 (77%), Positives = 338/393 (86%), Gaps = 5/393 (1%)
 Frame = +3

Query: 210  RLRSWPVFNAG----KQAKVRCEFEVKG-NGALSGETDPRFIDRQKALEAAMNDINNSFG 374
            R R+ P   AG    +  ++RCEF   G NGALSGE DPR +DRQKAL+AAMNDIN+SFG
Sbjct: 23   RRRAAPRAAAGGLTARARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAMNDINSSFG 82

Query: 375  KGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEV 554
            KGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHAIAEV
Sbjct: 83   KGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEV 142

Query: 555  QKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICV 734
            QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+
Sbjct: 143  QKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICI 202

Query: 735  DSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFY 914
            DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFY
Sbjct: 203  DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFY 262

Query: 915  GNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFE 1094
            GNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDED+G              PYKQAEFE
Sbjct: 263  GNPEVTSGGIALKFFASVRLEIRPIGKIKSPKGDEDVGVKVRVRVQKSKVSRPYKQAEFE 322

Query: 1095 IIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEK 1274
            IIFGEGVSKLGC+LDCAE+MD++ KKGSWYSY D RLGQGR+KALQYLRE P +C +IEK
Sbjct: 323  IIFGEGVSKLGCVLDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICDEIEK 382

Query: 1275 VVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            VVR+ + E +  + L    Q+   E+E QV+DE
Sbjct: 383  VVRAMIPEGSRHMSLLAFGQTSSTEDE-QVYDE 414


>ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG32971.1| protein recA [Zea
            mays] gi|238008650|gb|ACR35360.1| unknown [Zea mays]
            gi|414871794|tpg|DAA50351.1| TPA: putative recA DNA
            recombination family protein isoform 1 [Zea mays]
            gi|414871795|tpg|DAA50352.1| TPA: putative recA DNA
            recombination family protein isoform 2 [Zea mays]
          Length = 415

 Score =  598 bits (1543), Expect = e-168
 Identities = 309/408 (75%), Positives = 340/408 (83%), Gaps = 5/408 (1%)
 Frame = +3

Query: 165  THPTLHFPPLRFPISRLRSWPVFNAG----KQAKVRCEFEVKG-NGALSGETDPRFIDRQ 329
            +H  L FP       R R+ P   AG    +  ++RCEF   G NGALSGE DPR +DRQ
Sbjct: 11   SHLALSFPARS---RRRRAAPRAAAGGLTARARRLRCEFVAGGGNGALSGEDDPRLVDRQ 67

Query: 330  KALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPE 509
            K L+AAMNDINNSFGKGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPE
Sbjct: 68   KVLDAAMNDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPE 127

Query: 510  SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALET 689
            SSGKTTLALHAIAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE 
Sbjct: 128  SSGKTTLALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEI 187

Query: 690  ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCT 869
            ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCT
Sbjct: 188  ADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCT 247

Query: 870  LIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXX 1049
            L+FLNQIRYKIGVFYGNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDED+G       
Sbjct: 248  LMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRLIGKIKSAKGDEDVGVKVRVRV 307

Query: 1050 XXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKAL 1229
                   PYKQAEFEIIFGEGVSKLGC+LDCAE+MD++ KKGSWYSY D RLGQGR+KAL
Sbjct: 308  QKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMDVVAKKGSWYSYKDIRLGQGREKAL 367

Query: 1230 QYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            QYLRE P  C +IEKVVR+ + E +  + L    QS   E+E Q +DE
Sbjct: 368  QYLRESPTTCDEIEKVVRAMIPEGSRHMSLLAFGQSSSTEDE-QAYDE 414


>ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
            gi|108710024|gb|ABF97819.1| DNA repair protein recA,
            chloroplast precursor, putative, expressed [Oryza sativa
            Japonica Group] gi|113549209|dbj|BAF12652.1| Os03g0639700
            [Oryza sativa Japonica Group]
            gi|215704578|dbj|BAG94211.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 418

 Score =  598 bits (1543), Expect = e-168
 Identities = 304/394 (77%), Positives = 335/394 (85%), Gaps = 1/394 (0%)
 Frame = +3

Query: 195  RFPISRLRSWPVFNAGKQAKVRCEFEVKG-NGALSGETDPRFIDRQKALEAAMNDINNSF 371
            R P    R+      G+  ++RCEF   G NGALSGE DPR IDRQKAL+AAMNDIN+SF
Sbjct: 26   RAPAPSARATACGAVGRGRRLRCEFVAGGGNGALSGEDDPRLIDRQKALDAAMNDINSSF 85

Query: 372  GKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAE 551
            GKGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHAIAE
Sbjct: 86   GKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAE 145

Query: 552  VQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLIC 731
            VQKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC
Sbjct: 146  VQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLIC 205

Query: 732  VDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVF 911
            +DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVF
Sbjct: 206  IDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVF 265

Query: 912  YGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEF 1091
            YGNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDED+G              PYKQAEF
Sbjct: 266  YGNPEVTSGGIALKFFASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEF 325

Query: 1092 EIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIE 1271
            EIIFGEGVSKLGC+LDCAE+M+++ KKGSWYSY + RLGQGR+KALQYLRE P +C +IE
Sbjct: 326  EIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIE 385

Query: 1272 KVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            K VR+ + E    + L    +S L E E+QV DE
Sbjct: 386  KAVRAMIPEGARHMSLLAFGRSSLTE-EEQVDDE 418


>ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Cucumis sativus]
          Length = 417

 Score =  595 bits (1535), Expect = e-167
 Identities = 301/375 (80%), Positives = 333/375 (88%), Gaps = 1/375 (0%)
 Frame = +3

Query: 234  NAGKQAK-VRCEFEVKGNGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGG 410
            NAGK+ + +RCEFEV  NGALSG+ DPR +DR+KALEAAMNDIN SFGKGSVTRLGSAGG
Sbjct: 38   NAGKRVRELRCEFEVNLNGALSGDFDPRSVDRKKALEAAMNDINGSFGKGSVTRLGSAGG 97

Query: 411  ALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDA 590
            ALVETFPSGCLTLD ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDA
Sbjct: 98   ALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDA 157

Query: 591  EHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEI 770
            EHAFDP YS+A+GVD+ENLIVCQPD+GEMALE ADRMCRSGA+DLICVDSVSALTPRAEI
Sbjct: 158  EHAFDPTYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEI 217

Query: 771  EGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIAL 950
            EGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIAL
Sbjct: 218  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIAL 277

Query: 951  KFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGC 1130
            KFFASLRLEIRS+GK+KS KGDE+IG              PYKQAEFEIIFGEGVSKLGC
Sbjct: 278  KFFASLRLEIRSIGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC 337

Query: 1131 ILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQ 1310
            ILDCAE+M+I+VKKGSWYSYGDQRLGQGRD+ALQY +++P L  +IEK +++ +   T Q
Sbjct: 338  ILDCAEIMEIVVKKGSWYSYGDQRLGQGRDRALQYFKDNPALQDEIEKTLQTMLTSGTVQ 397

Query: 1311 VGLSYMKQSPLLENE 1355
            +G   +++ PL   E
Sbjct: 398  MGFQSIRK-PLPNQE 411


>ref|XP_003562019.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            isoform 2 [Brachypodium distachyon]
          Length = 430

 Score =  595 bits (1533), Expect = e-167
 Identities = 306/415 (73%), Positives = 338/415 (81%), Gaps = 19/415 (4%)
 Frame = +3

Query: 186  PPLRFPISRLRSWPVFNAGKQAKVRCEFEVK-GNGALSGETDPRFIDRQKALEAAMNDIN 362
            P  R  +S  R+      G+  ++RCEF    GNGALSGE DPR IDRQKAL+AAMNDIN
Sbjct: 16   PRPRRRVSATRASASGTTGRGRRLRCEFVASVGNGALSGEDDPRLIDRQKALDAAMNDIN 75

Query: 363  NSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHA 542
            NSFGKGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHA
Sbjct: 76   NSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHA 135

Query: 543  IAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALE------------ 686
            IAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE            
Sbjct: 136  IAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEISRTFVFVNLTC 195

Query: 687  ------TADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 848
                   ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGN
Sbjct: 196  MSLSLSVADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 255

Query: 849  ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIG 1028
            ASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDED+G
Sbjct: 256  ASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKGDEDVG 315

Query: 1029 XXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLG 1208
                          PYKQAEFEI+FGEGVSKLGCILDCAE+M+++ KKGSWYSY D RLG
Sbjct: 316  VKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIRLG 375

Query: 1209 QGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1373
            QGR+KALQYLRE P +C +IEKVVR+ + E T  + L    QS     E++V+DE
Sbjct: 376  QGREKALQYLRESPTICDEIEKVVRAMIPEGTRHMTLLAFGQSSSPTEEEEVYDE 430