BLASTX nr result

ID: Akebia23_contig00022019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00022019
         (361 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...    57   4e-06
emb|CBI27903.3| unnamed protein product [Vitis vinifera]               57   4e-06

>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 884

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/75 (40%), Positives = 40/75 (53%)
 Frame = +3

Query: 99  LVFQTKENYPNSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSFHDIVRD 278
           L+ Q + +Y N+FRTLK    CS  +I+V+    Q+                SF + +RD
Sbjct: 14  LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDT---QQVKVPLKTTKAKRKPRPSFFEQIRD 70

Query: 279 KWSLKIGSQRLKFPW 323
           KWSLKI S R KFPW
Sbjct: 71  KWSLKINSPREKFPW 85


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/75 (40%), Positives = 40/75 (53%)
 Frame = +3

Query: 99  LVFQTKENYPNSFRTLKLKTYCSCQTIEVENEEPQRTXXXXXXXXXXXXXXXSFHDIVRD 278
           L+ Q + +Y N+FRTLK    CS  +I+V+    Q+                SF + +RD
Sbjct: 56  LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDT---QQVKVPLKTTKAKRKPRPSFFEQIRD 112

Query: 279 KWSLKIGSQRLKFPW 323
           KWSLKI S R KFPW
Sbjct: 113 KWSLKINSPREKFPW 127


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