BLASTX nr result

ID: Akebia23_contig00020479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00020479
         (1217 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...    62   5e-07
ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...    59   3e-06
ref|XP_007044993.1| Tetratricopeptide repeat (TPR)-like superfam...    59   5e-06

>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +1

Query: 1084 AFDKMVDILGKAKQMDRMQLLLEEMRDGNHITRKTITKVMRRLA 1215
            A+D MVDI+GK KQMD+M+ LLEEM  G H+T KT+ K MRR A
Sbjct: 87   AYDTMVDIMGKMKQMDQMEFLLEEMEKGQHVTLKTVGKAMRRFA 130


>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial [Vitis vinifera]
          Length = 496

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 30/53 (56%), Positives = 38/53 (71%)
 Frame = +1

Query: 1057 GHIHAMNILAFDKMVDILGKAKQMDRMQLLLEEMRDGNHITRKTITKVMRRLA 1215
            G+ HA    A+D MVDILGK KQ+D+M+ L+EEMR GN +   T+ K MRRLA
Sbjct: 107  GYEHAPE--AYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRRLA 157


>ref|XP_007044993.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508708928|gb|EOY00825.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 504

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = +1

Query: 1084 AFDKMVDILGKAKQMDRMQLLLEEMRDGNHITRKTITKVMRRLA 1215
            A+D MVDILGK KQMD M+  LEEMR G+ +T  TI KVMRR A
Sbjct: 125  AYDLMVDILGKMKQMDHMKDFLEEMRQGHFVTLNTIAKVMRRFA 168


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