BLASTX nr result
ID: Akebia23_contig00017835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00017835
(1120 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 427 e-117
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 418 e-114
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 417 e-114
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu... 417 e-114
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 416 e-114
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca... 414 e-113
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 412 e-112
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 412 e-112
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha... 412 e-112
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops... 411 e-112
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps... 405 e-110
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc... 405 e-110
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 404 e-110
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 402 e-109
emb|CBI21038.3| unnamed protein product [Vitis vinifera] 402 e-109
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 402 e-109
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 401 e-109
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 401 e-109
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 400 e-109
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 400 e-109
>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1200
Score = 427 bits (1098), Expect = e-117
Identities = 198/297 (66%), Positives = 245/297 (82%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
RPVN QDII+FF KNMVN+ +G+ICNAHVVHADLSEYGA D+ C+ LAELAATAVDF KT
Sbjct: 904 RPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKT 963
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GKVVSMP LKPK+YPDFM KE +Q+YKS KILGRLYR+IKD D D+ + S+++ P D
Sbjct: 964 GKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGD 1023
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YD+ LE+ G++D+I DAW+QKC+YDGQL LL QYKV EEE+VTGHIWSMPKY+SRK
Sbjct: 1024 IPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRK 1083
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++K+++KHSY++L +EF+ +FE + + +L + EK LYEQKASAWYQV YHP WVK
Sbjct: 1084 QGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVK 1143
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
KSLEL+DPDG G MLSFAWI A+YL RIK+RHR T N+D+ KP+NSLA+YLA R+
Sbjct: 1144 KSLELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200
>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
sinensis]
Length = 1197
Score = 418 bits (1075), Expect = e-114
Identities = 200/298 (67%), Positives = 240/298 (80%)
Frame = -1
Query: 1120 TRPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAK 941
TRPV+ +DII+FF K+MVNE +G+ICNAHVVHAD SEYGALDE CI LAELAATAVDF K
Sbjct: 900 TRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAVDFPK 959
Query: 940 TGKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPE 761
TGK+V+MP LKPKLYPDFM KE +Q+YKSNKILGRLYR+ KD D DI S++ P
Sbjct: 960 TGKIVTMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKDAYDEDISVSSEVDINPV 1019
Query: 760 DVTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSR 581
D+ YDT LE+P S DFI DAWNQKC+YDGQL LL QYKV+ EEE+VTGHIWSMPKYNSR
Sbjct: 1020 DIHYDTDLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELVTGHIWSMPKYNSR 1079
Query: 580 KQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWV 401
KQG++KE++KHSY AL +EF+ +FE + D L+EDEK L+E+KASAWYQVTYHP+WV
Sbjct: 1080 KQGELKERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKASAWYQVTYHPEWV 1139
Query: 400 KKSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
KKSL+L++ D + +LSFAWI +YL RIK+R R N+DT KP+N LARY+A RI
Sbjct: 1140 KKSLDLQEQDSARSVVLLSFAWIANDYLARIKIRCREMANIDTSKPVNYLARYVADRI 1197
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 417 bits (1073), Expect = e-114
Identities = 200/303 (66%), Positives = 242/303 (79%), Gaps = 6/303 (1%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
RPVN QDIIDFF KNMVNE +G+ICNAHVVHADLSEYGALDE CI+LAELAATAVDF KT
Sbjct: 901 RPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKT 960
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDG------TDGDILSPSKI 776
GK+V+MP LKPKLYPDFM KE +Q+Y SNKILGRLYR++KD D D + S++
Sbjct: 961 GKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSEL 1020
Query: 775 SCAPEDVTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMP 596
+ D+ YD LE+ GS+D+I DAW+QKC+YDGQL LL QYKV EEE+VTGHIWSMP
Sbjct: 1021 NLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMP 1080
Query: 595 KYNSRKQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTY 416
K NSRKQG++KE++K SYH+L +EF+ +FE + D +LTEDEK +LYEQKASAWYQV Y
Sbjct: 1081 KCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAY 1140
Query: 415 HPQWVKKSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLA 236
HP+WV KS+EL++PD G +MLSFAWI A+YL RIK+R R + +DT KP+NSL +YLA
Sbjct: 1141 HPKWVNKSMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLA 1200
Query: 235 QRI 227
RI
Sbjct: 1201 DRI 1203
>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
6 [Gossypium hirsutum]
Length = 1196
Score = 417 bits (1071), Expect = e-114
Identities = 202/297 (68%), Positives = 236/297 (79%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R V +DII+FF+KNMVNE +GSICNAHVVH+DLSE+GA DEKCI LAELAA AVDF KT
Sbjct: 900 RSVTHKDIIEFFSKNMVNEHLGSICNAHVVHSDLSEHGASDEKCIHLAELAAIAVDFPKT 959
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+VSMP LKPKLYPDFM KE FQ+YKSNKILGRLYR IKD D D+ S+++ D
Sbjct: 960 GKIVSMPAQLKPKLYPDFMGKEEFQSYKSNKILGRLYRYIKDAYDKDVSESSELNFGASD 1019
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YD LEI GSAD+I DAW +KC+YDGQL+ LL QYKV EEE+VTG IWSMPKY S+K
Sbjct: 1020 INYDADLEITGSADYITDAWAKKCSYDGQLIGLLKQYKVKREEEVVTGQIWSMPKYASKK 1079
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
GD+KEK+ HSY +L +EF+ LFEN+ + +L EDEK LYE+KASAWYQVTYHP+WV+
Sbjct: 1080 LGDLKEKLGHSYGSLRKEFRQLFENMDSEFEQLNEDEKNKLYERKASAWYQVTYHPEWVQ 1139
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
K LE + PDGD MLSFAWI A+YL RIKVRH+ TENLD KP+NSL RYLA RI
Sbjct: 1140 KKLEFQKPDGDEGVVMLSFAWIAADYLARIKVRHQGTENLDFAKPVNSLVRYLADRI 1196
>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
protein [Populus trichocarpa]
Length = 1198
Score = 416 bits (1070), Expect = e-114
Identities = 197/299 (65%), Positives = 241/299 (80%), Gaps = 1/299 (0%)
Frame = -1
Query: 1120 TRPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAK 941
TRPVN QDI++FF KNM NE +G+ICNAHVV ADLSEYGALDEKC+ LAELAATAVDF K
Sbjct: 900 TRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPK 959
Query: 940 TGKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDG-TDGDILSPSKISCAP 764
TGK+VSMP LKPK+YPDFM KE Q+YKS KILGRLYR+IKD D D+ + S+++
Sbjct: 960 TGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVR 1019
Query: 763 EDVTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNS 584
D+ YD LE+ G+ DFI DAW++KC+YDGQL LL QYKV EEE+VTGH+WSMPK +S
Sbjct: 1020 GDIPYDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSS 1079
Query: 583 RKQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQW 404
RKQGD+KE++KHSY+ L REF+ +FE + D +L +DEK +LYE+KASAWYQVTYHP W
Sbjct: 1080 RKQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHW 1139
Query: 403 VKKSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
++KSLEL+D DG G MLSFAWI A+YL RIK+RH R N+D+ KP+NSLA+YLA R+
Sbjct: 1140 IQKSLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198
>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
6 [Theobroma cacao]
Length = 1197
Score = 414 bits (1063), Expect = e-113
Identities = 200/297 (67%), Positives = 238/297 (80%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R VN +DIIDFF KNMVNE +G+ICNAHVVHADLSEYGALDEKCI LAELAATAVDF KT
Sbjct: 901 REVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKT 960
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+VSMP +LKPKLYPDFM KE +Q+YKS KILGRLYR IKD D D+ S+I+ D
Sbjct: 961 GKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEINLDSPD 1020
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YDT LE+ GSAD+IDDAW +KC+YD QL+ LLGQYKV EEE+VTGHIWSMPKY SRK
Sbjct: 1021 INYDTDLEVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMPKYTSRK 1080
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
GD+KEK+ HSY AL +EF+ +FE++ + +L EDE+ LYE+KASAWYQVTYHP+WV+
Sbjct: 1081 LGDLKEKLGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTYHPKWVE 1140
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
K LEL+ DG MLSFAWI A+YL RIK+R + T N+D KP+NSL +YLA +I
Sbjct: 1141 KKLELQKSDGADPVVMLSFAWIAADYLARIKIRSQGTGNVDFSKPVNSLVKYLADKI 1197
>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
arietinum]
Length = 1201
Score = 412 bits (1059), Expect = e-112
Identities = 201/305 (65%), Positives = 241/305 (79%), Gaps = 7/305 (2%)
Frame = -1
Query: 1120 TRPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAK 941
TR V +DIIDFF KNMVNE +GSICNAHVVHAD S+YGALDEKCI LAELAATAVDF K
Sbjct: 898 TRQVTIRDIIDFFVKNMVNEHLGSICNAHVVHADCSDYGALDEKCIHLAELAATAVDFPK 957
Query: 940 TGKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPE 761
TGK+V+MP LKPKLYPDFM KE Q+YKS KILGRLYR+IKD D DI +P ++CA
Sbjct: 958 TGKLVTMPPHLKPKLYPDFMGKEHHQSYKSKKILGRLYRQIKDAYDKDIDAPD-LNCASS 1016
Query: 760 DVTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSR 581
D+ YDT LE+PGSADFI DAW QKC+YDGQL LLGQYKV TEEE+VTG IWSMPKYNSR
Sbjct: 1017 DIHYDTDLEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSR 1076
Query: 580 KQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWV 401
KQG++KE++KHSY AL +EF+ FE + D +L+++EK +LYEQKASAWYQV YHP+WV
Sbjct: 1077 KQGELKERLKHSYSALKKEFRQTFEKLNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWV 1136
Query: 400 KKSLELR-------DPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARY 242
K+S +L+ + D G MLSF WI +YL R K+R RR EN D+ KP++SLA+Y
Sbjct: 1137 KRSHDLKVKSSDNQEADSLGNMVMLSFPWIAVDYLARTKIRRRRVENFDSVKPVDSLAKY 1196
Query: 241 LAQRI 227
L++R+
Sbjct: 1197 LSERL 1201
>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
arietinum]
Length = 1247
Score = 412 bits (1059), Expect = e-112
Identities = 201/305 (65%), Positives = 241/305 (79%), Gaps = 7/305 (2%)
Frame = -1
Query: 1120 TRPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAK 941
TR V +DIIDFF KNMVNE +GSICNAHVVHAD S+YGALDEKCI LAELAATAVDF K
Sbjct: 944 TRQVTIRDIIDFFVKNMVNEHLGSICNAHVVHADCSDYGALDEKCIHLAELAATAVDFPK 1003
Query: 940 TGKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPE 761
TGK+V+MP LKPKLYPDFM KE Q+YKS KILGRLYR+IKD D DI +P ++CA
Sbjct: 1004 TGKLVTMPPHLKPKLYPDFMGKEHHQSYKSKKILGRLYRQIKDAYDKDIDAPD-LNCASS 1062
Query: 760 DVTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSR 581
D+ YDT LE+PGSADFI DAW QKC+YDGQL LLGQYKV TEEE+VTG IWSMPKYNSR
Sbjct: 1063 DIHYDTDLEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSR 1122
Query: 580 KQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWV 401
KQG++KE++KHSY AL +EF+ FE + D +L+++EK +LYEQKASAWYQV YHP+WV
Sbjct: 1123 KQGELKERLKHSYSALKKEFRQTFEKLNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWV 1182
Query: 400 KKSLELR-------DPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARY 242
K+S +L+ + D G MLSF WI +YL R K+R RR EN D+ KP++SLA+Y
Sbjct: 1183 KRSHDLKVKSSDNQEADSLGNMVMLSFPWIAVDYLARTKIRRRRVENFDSVKPVDSLAKY 1242
Query: 241 LAQRI 227
L++R+
Sbjct: 1243 LSERL 1247
>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
Full=RNA-directed RNA polymerase 6
gi|12324444|gb|AAG52184.1|AC012329_11 putative
RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
polymerase-like protein [Arabidopsis thaliana]
gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
6 [Arabidopsis thaliana]
Length = 1196
Score = 412 bits (1058), Expect = e-112
Identities = 194/297 (65%), Positives = 239/297 (80%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R VN QDIIDFF +N+ NE++G+ICNAHVVHAD SEYGA+DE+C+ LAELAATAVDF KT
Sbjct: 900 RAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKT 959
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+VSMP LKPKLYPDFM KE +QTYKSNKILGRLYR++K+ D D + S+ S P
Sbjct: 960 GKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSA 1019
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YD VLEIPG D I +AW KC YDGQL+ LLGQYKV EEE+VTGHIWSMPKY S+K
Sbjct: 1020 IPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKK 1079
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++KE++KHSY++L +EF+ +FE D L+E+EK +LYE+KASAWY VTYHP+WVK
Sbjct: 1080 QGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVK 1139
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
KSLEL+DPD AMLSFAWI A+YL RIK+R R ++D+ KP++SLA++LAQR+
Sbjct: 1140 KSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196
>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
Length = 1196
Score = 411 bits (1057), Expect = e-112
Identities = 194/297 (65%), Positives = 239/297 (80%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R VN QDIIDFF +N+ NE++G+ICNAHVVHAD SEYGA+DE+C+ LAELAATAVDF KT
Sbjct: 900 RAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKT 959
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+VSMP LKPKLYPDFM KE +QTYKSNKILGRLYR +K+ D D + S+ S P
Sbjct: 960 GKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRPVKEVYDEDAEASSEESTDPSA 1019
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YD VLEIPG D I +AW KC+YDGQL+ LLGQYKV EEE+VTGHIWSMPKY S+K
Sbjct: 1020 IPYDAVLEIPGFEDLIPEAWGHKCSYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKK 1079
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++KE++KHSY++L +EF+ +FE D L+E+EK +LYE+KASAWY VTYHP+WVK
Sbjct: 1080 QGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVK 1139
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
KSLEL+DPD AMLSFAWI A+YL RIK+R R ++D+ KP++SLA++LAQR+
Sbjct: 1140 KSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196
>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
gi|482559225|gb|EOA23416.1| hypothetical protein
CARUB_v10016597mg [Capsella rubella]
Length = 1197
Score = 405 bits (1040), Expect = e-110
Identities = 194/298 (65%), Positives = 238/298 (79%), Gaps = 1/298 (0%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R VN QDIIDFF +NM NE +G+ICNAHVVHAD SEYGA+DE C+ LAELAATAVDF KT
Sbjct: 900 RAVNHQDIIDFFARNMANESLGTICNAHVVHADRSEYGAMDEDCLLLAELAATAVDFPKT 959
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+VS+P LKPKLYPDFM KE +QTYKSNKILGRLYR++K+ D D + S+ + D
Sbjct: 960 GKIVSIPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEENPDLSD 1019
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YDT LEIPG AD I +AW KC+YDGQL+ LLGQYKV EEE+VTGHIWSMPKY S+K
Sbjct: 1020 IPYDTDLEIPGFADLIPEAWRHKCSYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKK 1079
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QGD+KE++KHSY++L +EF+ +FE D L+++EK +LYE+KASAWY VTYHP+WV
Sbjct: 1080 QGDLKERLKHSYNSLKKEFRKVFEETIPDHENLSDEEKNILYEKKASAWYHVTYHPKWVT 1139
Query: 397 KSLELRDPDGDGAPA-MLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
KSLEL+DPD A MLSFAWI A+YL RIK+R R N+D+ KP++SLA++LAQR+
Sbjct: 1140 KSLELQDPDESSTHAVMLSFAWIAADYLARIKIRSREIGNMDSAKPVDSLAKFLAQRL 1197
>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
[Medicago truncatula]
Length = 1188
Score = 405 bits (1040), Expect = e-110
Identities = 195/305 (63%), Positives = 240/305 (78%), Gaps = 7/305 (2%)
Frame = -1
Query: 1120 TRPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAK 941
TR V QDIIDFF +NMVNE++GSICNAHVVHAD S+YGALDE C+ LAELAATAVDF K
Sbjct: 885 TRQVTVQDIIDFFVRNMVNEQLGSICNAHVVHADSSDYGALDENCVHLAELAATAVDFPK 944
Query: 940 TGKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPE 761
TGK+V+MP +LKPKLYPDFM KE Q+YKS KILGRLYR+IKD D DI +P + +C
Sbjct: 945 TGKLVTMPSNLKPKLYPDFMGKEHHQSYKSKKILGRLYRRIKDAYDKDIDAP-EFNCVSS 1003
Query: 760 DVTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSR 581
D+ YDT LE+PGS++FI DAW Q+C+YDGQL LLGQYKV TEEE+VTG IWSMPKYNSR
Sbjct: 1004 DILYDTDLEVPGSSEFIADAWEQRCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSR 1063
Query: 580 KQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWV 401
KQG++KE++KHSY AL +EF+ +FE + D +L++ EK +LYEQKASAWYQVTYHP+WV
Sbjct: 1064 KQGELKERLKHSYSALKKEFRQIFEKLKSDVGELSDKEKNLLYEQKASAWYQVTYHPKWV 1123
Query: 400 KKSLEL-------RDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARY 242
KKSL+L + D G MLSF WI +YL K RHRR ++ D+ K ++SLA+Y
Sbjct: 1124 KKSLDLQLKSSDNQSADSLGNMVMLSFPWIAVDYLACTKTRHRRVKDFDSTKQVDSLAKY 1183
Query: 241 LAQRI 227
L++R+
Sbjct: 1184 LSERL 1188
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 404 bits (1038), Expect = e-110
Identities = 192/297 (64%), Positives = 235/297 (79%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R VN DIIDFF+KNMV E +G ICNAHVVHADLSE+GALDEKC++LAELAA AVDF KT
Sbjct: 901 RQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKT 960
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+V+MP LKPK+YPDFM KE FQ+YKS KILG+LYR++KD D + + + P+D
Sbjct: 961 GKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKD 1020
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YDT LEI GS FIDDAWN KC+YDGQL LLGQYKV+ EEE+VTGHIWSMPKY+++K
Sbjct: 1021 IPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAKK 1080
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++KE++KH+Y+ L +EF+N+FE + D L +DEK +YE+KASAWYQVTYHP WV
Sbjct: 1081 QGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVA 1140
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
+SLEL+ PD + MLSFAWI A+YL RIK+RHR D+ KPINSL RYLA +I
Sbjct: 1141 RSLELQIPDAVSSTVMLSFAWIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197
>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 402 bits (1034), Expect = e-109
Identities = 191/297 (64%), Positives = 234/297 (78%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R VN DIIDFF+KNMV E +G ICNAHVVHADLSE+GALDEKC++LAELAA AVDF KT
Sbjct: 901 RQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKT 960
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+V+MP LKPK+YPDFM KE FQ+YKS KILG+LYR++KD D + + + P+D
Sbjct: 961 GKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKD 1020
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YD+ LEI GS FIDDAWN KC+YDGQL LLGQYKV+ EEE+VTGHIWSMPKY+++K
Sbjct: 1021 IPYDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKK 1080
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++KE++KH+Y+ L +EF+N+FE + D L +DEK +YE+KASAWYQVTYHP WV
Sbjct: 1081 QGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVA 1140
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
+SLEL+ PD MLSFAWI A+YL RIK+RHRR + D+ KPINSL RYL I
Sbjct: 1141 RSLELQLPDAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197
>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
Length = 1035
Score = 402 bits (1033), Expect = e-109
Identities = 195/298 (65%), Positives = 236/298 (79%), Gaps = 1/298 (0%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R V + DIIDFFTKNMVNE +G+ICNAHVVHAD SEYGALDE C+ LAE AATAVDF KT
Sbjct: 738 REVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATAVDFPKT 797
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+V++P LKPK+YPDFM KE FQTY+SNKILG++YR+IKD + D+ S+ +
Sbjct: 798 GKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADK 857
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
V +D L IPGSADFI+DAW KC+YDGQL LLGQYKV EEE+VTGH+WSMPKY SRK
Sbjct: 858 VPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRK 917
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++ E++KH+Y +L +EF+ +FE + D +LT+DEK LYEQKASAWYQVTYHP WVK
Sbjct: 918 QGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVK 977
Query: 397 KSLELRDPDG-DGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
KSLEL++PD G MLSFAWI A+YL RIK+R + T N+D+ KPINSLAR+L RI
Sbjct: 978 KSLELQNPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1035
>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
Length = 1197
Score = 402 bits (1033), Expect = e-109
Identities = 195/298 (65%), Positives = 236/298 (79%), Gaps = 1/298 (0%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R V + DIIDFFTKNMVNE +G+ICNAHVVHAD SEYGALDE C+ LAE AATAVDF KT
Sbjct: 900 REVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATAVDFPKT 959
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+V++P LKPK+YPDFM KE FQTY+SNKILG++YR+IKD + D+ S+ +
Sbjct: 960 GKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADK 1019
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
V +D L IPGSADFI+DAW KC+YDGQL LLGQYKV EEE+VTGH+WSMPKY SRK
Sbjct: 1020 VPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRK 1079
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++ E++KH+Y +L +EF+ +FE + D +LT+DEK LYEQKASAWYQVTYHP WVK
Sbjct: 1080 QGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVK 1139
Query: 397 KSLELRDPDG-DGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
KSLEL++PD G MLSFAWI A+YL RIK+R + T N+D+ KPINSLAR+L RI
Sbjct: 1140 KSLELQNPDEVFGERVMLSFAWITADYLARIKIRRKGTGNVDSSKPINSLARFLVDRI 1197
>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 401 bits (1031), Expect = e-109
Identities = 190/297 (63%), Positives = 235/297 (79%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R VN DIIDFF+KNMV E +G ICNAHVVHADLSE+GALDEKC++LAELAA AVDF KT
Sbjct: 901 RQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKT 960
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+V+MP LKPK+YPDFM KE FQ+YKS KILG+LYR++KD D + + + P+D
Sbjct: 961 GKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKD 1020
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YDT L IPGS FIDDAWN KC+YDGQL LLGQYKV+ EEE+VTGHIWSMPKY+++K
Sbjct: 1021 IPYDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKK 1080
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++KE++KH+Y+ L +EF+N+FE + D L +DEK +YE+KASAWYQVTY+P WV
Sbjct: 1081 QGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVA 1140
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
+SLEL+ PD + MLSFAWI A+YL RIK+RHR + D+ KPINSL RYL +I
Sbjct: 1141 RSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197
>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
max] gi|571459266|ref|XP_006581359.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
max]
Length = 1204
Score = 401 bits (1030), Expect = e-109
Identities = 197/307 (64%), Positives = 241/307 (78%), Gaps = 9/307 (2%)
Frame = -1
Query: 1120 TRPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAK 941
TR V T+DII+FF +NMVNE +G+ICNAHVVHAD S+YGALDEKCI LAELAATAVDF K
Sbjct: 899 TRQVMTRDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPK 958
Query: 940 TGKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPE 761
TGK+V+MP LKPKLYPDFM KE Q+Y+S KILGRLYR+IKD D DI +P ++
Sbjct: 959 TGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDEDIDAPY-LNFVTG 1017
Query: 760 DVTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSR 581
D+ YD LE+PGSADFI DAW QKC+YDGQL LLGQYKV EEE+VTG IWSMPKYNSR
Sbjct: 1018 DIPYDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSR 1077
Query: 580 KQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWV 401
KQG++KE++KHSY AL +EF++ FE + D +L+E+EK + YEQKASAWYQVTYHP+WV
Sbjct: 1078 KQGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWV 1137
Query: 400 KKSLELRD-------PDGDGAPAMLSFAWIPAEYLVRIKV--RHRRTENLDTRKPINSLA 248
KKSL+L+D D G+ MLSF WI +YL R K+ RH+R N D+ KP++SLA
Sbjct: 1138 KKSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRCGNFDSTKPVDSLA 1197
Query: 247 RYLAQRI 227
+YL++R+
Sbjct: 1198 KYLSERL 1204
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 400 bits (1029), Expect = e-109
Identities = 191/297 (64%), Positives = 233/297 (78%)
Frame = -1
Query: 1117 RPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAKT 938
R VN DIIDFF+KNMV E +G ICNAHVVHADLSE+GALDEKC++LAELAA AVDF KT
Sbjct: 901 RQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKT 960
Query: 937 GKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPED 758
GK+V+MP LKPK+YPDFM KE FQ+YKS KILG+LYR++KD D + + + P+D
Sbjct: 961 GKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKD 1020
Query: 757 VTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSRK 578
+ YDT LEI GS FIDDAWN KC+YDGQL LLGQYKV+ EEE+VTG+IWSMPKYN++K
Sbjct: 1021 IPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAKK 1080
Query: 577 QGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWVK 398
QG++KE++KH+Y+ L +EF+N+FE + D L +DEK +YE+KASAWYQVTYHP WV
Sbjct: 1081 QGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVA 1140
Query: 397 KSLELRDPDGDGAPAMLSFAWIPAEYLVRIKVRHRRTENLDTRKPINSLARYLAQRI 227
+SLEL+ D MLSFAWI A+YL RIK+RHRR + D+ KPINSL RYL I
Sbjct: 1141 RSLELQLADAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197
>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
max] gi|571449461|ref|XP_006578148.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
max]
Length = 1204
Score = 400 bits (1029), Expect = e-109
Identities = 197/307 (64%), Positives = 241/307 (78%), Gaps = 9/307 (2%)
Frame = -1
Query: 1120 TRPVNTQDIIDFFTKNMVNEKVGSICNAHVVHADLSEYGALDEKCIQLAELAATAVDFAK 941
TR V T+DII+FF +NMVNE +G+ICNAHVVHAD S+YGALDEKCI LAELAATAVDF K
Sbjct: 899 TRQVMTRDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPK 958
Query: 940 TGKVVSMPQSLKPKLYPDFMEKEPFQTYKSNKILGRLYRKIKDGTDGDILSPSKISCAPE 761
TGK+V+MP LKPKLYPDFM KE Q+Y+SNKILGRLYR IKD D DI +P ++
Sbjct: 959 TGKLVTMPPHLKPKLYPDFMGKERHQSYRSNKILGRLYRHIKDAYDEDIEAPY-LNFVTG 1017
Query: 760 DVTYDTVLEIPGSADFIDDAWNQKCAYDGQLMALLGQYKVSTEEEMVTGHIWSMPKYNSR 581
D+ YD LE+PGSADFI DAW QKC+YDGQL L+GQYKV EEE+VTG IWSMPKYNSR
Sbjct: 1018 DIPYDKDLEVPGSADFIADAWEQKCSYDGQLSGLIGQYKVKREEEVVTGQIWSMPKYNSR 1077
Query: 580 KQGDMKEKIKHSYHALNREFKNLFENVGQDSLKLTEDEKIVLYEQKASAWYQVTYHPQWV 401
KQG++KE++KHSY AL +EF+ FE + D +L+E+EK +LYEQKASAWYQVTYHP+WV
Sbjct: 1078 KQGELKERLKHSYSALKKEFRYTFEKLNSDVGELSEEEKNLLYEQKASAWYQVTYHPEWV 1137
Query: 400 KKSLELRD-------PDGDGAPAMLSFAWIPAEYLVRIKV--RHRRTENLDTRKPINSLA 248
KKSL+L+D D G+ MLSF WI +YL R K+ RH+R+ N D+ KP++ LA
Sbjct: 1138 KKSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRSGNFDSTKPVDYLA 1197
Query: 247 RYLAQRI 227
+YL++R+
Sbjct: 1198 KYLSERL 1204