BLASTX nr result

ID: Akebia23_contig00017312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00017312
         (408 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006486719.1| PREDICTED: probable ubiquitin-conjugating en...    58   2e-06
ref|XP_006486717.1| PREDICTED: probable ubiquitin-conjugating en...    58   2e-06

>ref|XP_006486719.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like isoform
           X3 [Citrus sinensis]
          Length = 1133

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 48/87 (55%)
 Frame = -2

Query: 308 MGNEHLHGDANIAESPTTVGNDITLNPIDNMANGFASEPTRSSGNDESMNPRDVRGNLLN 129
           M NE     +N+ E  T+V +D      D+  NGF  EP  +S ++E     +   NL +
Sbjct: 1   MENELCAAASNVNEPATSVHDDNFTARDDSKMNGFVGEPNVNSKDNEVKKLDEAVKNLYS 60

Query: 128 APYIYRQDIVRCNKDARLTGIVMEVAG 48
            P+IYRQD+VR NK   + GIV EVAG
Sbjct: 61  VPHIYRQDVVRSNKSG-VIGIVSEVAG 86


>ref|XP_006486717.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 23-like isoform
           X1 [Citrus sinensis] gi|568866763|ref|XP_006486718.1|
           PREDICTED: probable ubiquitin-conjugating enzyme E2
           23-like isoform X2 [Citrus sinensis]
          Length = 1156

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 48/87 (55%)
 Frame = -2

Query: 308 MGNEHLHGDANIAESPTTVGNDITLNPIDNMANGFASEPTRSSGNDESMNPRDVRGNLLN 129
           M NE     +N+ E  T+V +D      D+  NGF  EP  +S ++E     +   NL +
Sbjct: 1   MENELCAAASNVNEPATSVHDDNFTARDDSKMNGFVGEPNVNSKDNEVKKLDEAVKNLYS 60

Query: 128 APYIYRQDIVRCNKDARLTGIVMEVAG 48
            P+IYRQD+VR NK   + GIV EVAG
Sbjct: 61  VPHIYRQDVVRSNKSG-VIGIVSEVAG 86


Top