BLASTX nr result
ID: Akebia23_contig00012170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00012170 (239 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36742.3| unnamed protein product [Vitis vinifera] 55 8e-06 ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ... 55 8e-06 >emb|CBI36742.3| unnamed protein product [Vitis vinifera] Length = 443 Score = 55.5 bits (132), Expect = 8e-06 Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 12/88 (13%) Frame = -1 Query: 239 RQGSVSGGSIREGSSRWKSFR-FGRSVRAANSDRWMFSMAPPFFWRTSSVRSQKI---GE 72 RQG + G EGSSR K+FR F R R+ SDRW FS+ PPFF R SS++S K+ GE Sbjct: 305 RQGYRTAG---EGSSRGKNFRRFDRLERSGKSDRWTFSITPPFFSRASSLKSPKVAADGE 361 Query: 71 GS--------VKLPFESSGAKSDVVEQP 12 + P S GAK D P Sbjct: 362 ATSSTSPRKPTLTPKASFGAKRDPAGTP 389 >ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis vinifera] gi|147843962|emb|CAN83712.1| hypothetical protein VITISV_011102 [Vitis vinifera] Length = 420 Score = 55.5 bits (132), Expect = 8e-06 Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 12/88 (13%) Frame = -1 Query: 239 RQGSVSGGSIREGSSRWKSFR-FGRSVRAANSDRWMFSMAPPFFWRTSSVRSQKI---GE 72 RQG + G EGSSR K+FR F R R+ SDRW FS+ PPFF R SS++S K+ GE Sbjct: 320 RQGYRTAG---EGSSRGKNFRRFDRLERSGKSDRWTFSITPPFFSRASSLKSPKVAADGE 376 Query: 71 GS--------VKLPFESSGAKSDVVEQP 12 + P S GAK D P Sbjct: 377 ATSSTSPRKPTLTPKASFGAKRDPAGTP 404