BLASTX nr result

ID: Akebia23_contig00012170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00012170
         (239 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36742.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...    55   8e-06

>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
 Frame = -1

Query: 239 RQGSVSGGSIREGSSRWKSFR-FGRSVRAANSDRWMFSMAPPFFWRTSSVRSQKI---GE 72
           RQG  + G   EGSSR K+FR F R  R+  SDRW FS+ PPFF R SS++S K+   GE
Sbjct: 305 RQGYRTAG---EGSSRGKNFRRFDRLERSGKSDRWTFSITPPFFSRASSLKSPKVAADGE 361

Query: 71  GS--------VKLPFESSGAKSDVVEQP 12
            +           P  S GAK D    P
Sbjct: 362 ATSSTSPRKPTLTPKASFGAKRDPAGTP 389


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
 Frame = -1

Query: 239 RQGSVSGGSIREGSSRWKSFR-FGRSVRAANSDRWMFSMAPPFFWRTSSVRSQKI---GE 72
           RQG  + G   EGSSR K+FR F R  R+  SDRW FS+ PPFF R SS++S K+   GE
Sbjct: 320 RQGYRTAG---EGSSRGKNFRRFDRLERSGKSDRWTFSITPPFFSRASSLKSPKVAADGE 376

Query: 71  GS--------VKLPFESSGAKSDVVEQP 12
            +           P  S GAK D    P
Sbjct: 377 ATSSTSPRKPTLTPKASFGAKRDPAGTP 404


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