BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00011485
         (455 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]                62   1e-07
ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobro...    59   7e-07
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro...    59   7e-07
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]                58   1e-06
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...    57   3e-06
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]                   56   6e-06
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]              56   6e-06
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]               56   6e-06
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]                   56   6e-06
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                  55   8e-06

>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/73 (47%), Positives = 42/73 (57%)
 Frame = +3

Query: 114 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 293
           MAV   +  +         EP+VFKRSN TSK  QLN + KK S QR+DG SG+ V+D  
Sbjct: 1   MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKSS-QRYDGQSGRQVSDVP 59

Query: 294 SPKNQKSSLEKGK 332
           S   Q SS  KGK
Sbjct: 60  STNGQSSSASKGK 72


>ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
           gi|590606159|ref|XP_007020668.1| DNA topoisomerase I
           alpha isoform 3 [Theobroma cacao]
           gi|508720294|gb|EOY12191.1| DNA topoisomerase I alpha
           isoform 3 [Theobroma cacao] gi|508720296|gb|EOY12193.1|
           DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
          Length = 836

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 174 PIVFKRSNITS-KQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKMV 338
           P+VFKR+N +S KQ QLN E+KK S QR DG SG+ V+D  SP  Q S+  K K +
Sbjct: 21  PVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKNKSI 76


>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
           gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
           alpha isoform 1 [Theobroma cacao]
           gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
           isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
           DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
          Length = 904

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 174 PIVFKRSNITS-KQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKMV 338
           P+VFKR+N +S KQ QLN E+KK S QR DG SG+ V+D  SP  Q S+  K K +
Sbjct: 21  PVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKNKSI 76


>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
          Length = 926

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/74 (41%), Positives = 40/74 (54%)
 Frame = +3

Query: 114 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 293
           MAV+   TT           P++FKRSN TSKQ Q N E KK S Q+H G S  H +D  
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPTSKQNQANAEKKKLSLQKHVGQSAVHTSDVR 60

Query: 294 SPKNQKSSLEKGKM 335
               + SS +KG++
Sbjct: 61  PANGESSSAQKGRI 74


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 39/74 (52%)
 Frame = +3

Query: 114 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 293
           MAV+   TT           P++FKRSN  SKQ Q N E KK S QRH G S  H +D  
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60

Query: 294 SPKNQKSSLEKGKM 335
               + SS +KG++
Sbjct: 61  PANGENSSAQKGRI 74


>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
          Length = 920

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/74 (40%), Positives = 39/74 (52%)
 Frame = +3

Query: 114 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 293
           MAV+   TT           P++FKRSN  SKQ Q N E KK S Q+H G S  H +D  
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 294 SPKNQKSSLEKGKM 335
               + SS +KG++
Sbjct: 61  PANGESSSAQKGRI 74


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/74 (40%), Positives = 39/74 (52%)
 Frame = +3

Query: 114 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 293
           MAV+   TT           P++FKRSN  SKQ Q N E KK S Q+H G S  H +D  
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 294 SPKNQKSSLEKGKM 335
               + SS +KG++
Sbjct: 61  PANGENSSAQKGRI 74


>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
          Length = 920

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/74 (40%), Positives = 39/74 (52%)
 Frame = +3

Query: 114 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 293
           MAV+   TT           P++FKRSN  SKQ Q N E KK S Q+H G S  H +D  
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 294 SPKNQKSSLEKGKM 335
               + SS +KG++
Sbjct: 61  PANGESSSAQKGRI 74


>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
          Length = 926

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/74 (40%), Positives = 39/74 (52%)
 Frame = +3

Query: 114 MAVDTHITTRHFXXXXXXXEPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSF 293
           MAV+   TT           P++FKRSN  SKQ Q N E KK S Q+H G S  H +D  
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 294 SPKNQKSSLEKGKM 335
               + SS +KG++
Sbjct: 61  PANGESSSAQKGRI 74


>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/56 (50%), Positives = 36/56 (64%)
 Frame = +3

Query: 171 EPIVFKRSNITSKQKQLNLEIKKPSFQRHDGSSGKHVADSFSPKNQKSSLEKGKMV 338
           EPIVFKR+N  SKQ Q N E +K S Q+ DG S + + DS     + SS +KG+MV
Sbjct: 20  EPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSRPANGESSSGQKGRMV 75