BLASTX nr result

ID: Akebia23_contig00006491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00006491
         (557 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515068.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|XP_002301438.1| hypothetical protein POPTR_0002s17980g [Popu...    62   8e-08
ref|XP_002320226.1| hypothetical protein POPTR_0014s10080g [Popu...    57   4e-06
gb|ABK96490.1| unknown [Populus trichocarpa x Populus deltoides]       56   5e-06

>ref|XP_002515068.1| conserved hypothetical protein [Ricinus communis]
           gi|223545548|gb|EEF47052.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 35/75 (46%), Positives = 51/75 (68%)
 Frame = -3

Query: 528 MGNCLTMKQQLVHPSSFNGSKDSNPLRIKVRMTAREFNELMSQADQRKGKNDIGRLIVEK 349
           MGNCL  KQ +VHP     S     LRIKVRM+AR+  E MS+ D RKG +++GR+++++
Sbjct: 1   MGNCLGRKQ-VVHP--LEHSTSDYKLRIKVRMSARQLKEFMSRVDLRKGDSELGRVVLQE 57

Query: 348 CLNGKFDPQVVEPED 304
           CL+G+   +VV  +D
Sbjct: 58  CLDGRLTARVVGRQD 72


>ref|XP_002301438.1| hypothetical protein POPTR_0002s17980g [Populus trichocarpa]
           gi|222843164|gb|EEE80711.1| hypothetical protein
           POPTR_0002s17980g [Populus trichocarpa]
          Length = 101

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
 Frame = -3

Query: 528 MGNCLTMKQQLVHPSSFNG---------SKDSNPLRIKVRMTAREFNELMSQADQRKGKN 376
           MGN  + K   VHP   +G         +  S+ LRIKVRMT  +  ELM+ AD  +G +
Sbjct: 1   MGNWFSRKYLAVHPMDQDGEDIVKSSLITPSSSSLRIKVRMTTTQLEELMALADLSEGSS 60

Query: 375 DIGRLIVEKCLNGKFDPQVV 316
           D+GR+I+++CL+G+F  +VV
Sbjct: 61  DLGRVILQECLDGRFRARVV 80


>ref|XP_002320226.1| hypothetical protein POPTR_0014s10080g [Populus trichocarpa]
           gi|222860999|gb|EEE98541.1| hypothetical protein
           POPTR_0014s10080g [Populus trichocarpa]
          Length = 100

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/69 (40%), Positives = 46/69 (66%)
 Frame = -3

Query: 510 MKQQLVHPSSFNGSKDSNPLRIKVRMTAREFNELMSQADQRKGKNDIGRLIVEKCLNGKF 331
           +K  L+ PSS       + LRIKVRMT  +  ELM+QAD  +G +++G +I+++CL+G+F
Sbjct: 22  VKSSLIAPSS-------SSLRIKVRMTTTQLKELMTQADLSEGNSELGSMILQECLDGRF 74

Query: 330 DPQVVEPED 304
             +VV  ++
Sbjct: 75  RARVVAGDE 83


>gb|ABK96490.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 100

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/65 (43%), Positives = 44/65 (67%)
 Frame = -3

Query: 510 MKQQLVHPSSFNGSKDSNPLRIKVRMTAREFNELMSQADQRKGKNDIGRLIVEKCLNGKF 331
           +K  L+ PSS       + LRIKVRMT  +  ELM+QAD  +G +++G +I+++CL+G+F
Sbjct: 22  VKSNLITPSS-------SSLRIKVRMTTTQLKELMTQADLSEGNSELGSMILQECLDGRF 74

Query: 330 DPQVV 316
             +VV
Sbjct: 75  RARVV 79


Top