BLASTX nr result
ID: Akebia23_contig00001474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00001474
(1543 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni... 587 e-165
emb|CBI17547.3| unnamed protein product [Vitis vinifera] 585 e-164
ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citr... 583 e-164
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera] 583 e-164
ref|XP_006466767.1| PREDICTED: splicing factor U2af large subuni... 583 e-164
ref|XP_006466764.1| PREDICTED: splicing factor U2af large subuni... 579 e-162
ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citr... 579 e-162
ref|XP_006466765.1| PREDICTED: splicing factor U2af large subuni... 578 e-162
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni... 571 e-160
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni... 571 e-160
gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora] 567 e-159
ref|XP_006466768.1| PREDICTED: splicing factor U2af large subuni... 564 e-158
ref|XP_002310209.2| hypothetical protein POPTR_0007s12550g [Popu... 564 e-158
ref|XP_007203764.1| hypothetical protein PRUPE_ppa003118mg [Prun... 561 e-157
ref|XP_007046989.1| Splicing factor U2af large subunit A isoform... 560 e-157
gb|EXB59126.1| Splicing factor U2af large subunit B [Morus notab... 557 e-156
ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Popu... 557 e-156
sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large... 556 e-156
ref|XP_007009943.1| Splicing factor U2af large subunit A isoform... 555 e-155
ref|XP_007046990.1| Splicing factor U2af large subunit A isoform... 555 e-155
>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
Length = 568
Score = 587 bits (1512), Expect = e-165
Identities = 300/381 (78%), Positives = 315/381 (82%), Gaps = 11/381 (2%)
Frame = -2
Query: 1317 FAVQMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANE 1138
F Q+ GT P IPGMFPNMF L GQFG LP+MP QAMTQQATRHARRVYVGGLSPTANE
Sbjct: 188 FTGQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANE 247
Query: 1137 QTVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEG 958
Q+VATFFSQVMSAIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEG
Sbjct: 248 QSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 307
Query: 957 APVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTE 778
APVKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTE
Sbjct: 308 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 367
Query: 777 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIV 598
AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL V
Sbjct: 368 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 427
Query: 597 RRANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXX 418
RRANQG +QPKPEQE+ GAL TKVVCLTQVV+ DELQ
Sbjct: 428 RRANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNADELQDDEAYE 487
Query: 417 XXXXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFG 271
MR EG K+G P+PG+GKVF+EY+D DGATKAR GLNGRKF
Sbjct: 488 DIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFD 547
Query: 270 GNQVVAVYYPENKFSQGEYDG 208
GNQVVAV+YPENKFSQGEYDG
Sbjct: 548 GNQVVAVFYPENKFSQGEYDG 568
>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 585 bits (1509), Expect = e-164
Identities = 299/378 (79%), Positives = 314/378 (83%), Gaps = 11/378 (2%)
Frame = -2
Query: 1308 QMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQTV 1129
Q+ GT P IPGMFPNMF L GQFG LP+MP QAMTQQATRHARRVYVGGLSPTANEQ+V
Sbjct: 16 QIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSV 75
Query: 1128 ATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAPV 949
ATFFSQVMSAIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPV
Sbjct: 76 ATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 135
Query: 948 KVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQI 769
KVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTEAQI
Sbjct: 136 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI 195
Query: 768 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRRA 589
RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRRA
Sbjct: 196 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 255
Query: 588 NQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXXXX 409
NQG +QPKPEQE+ GAL TKVVCLTQVV+ DELQ
Sbjct: 256 NQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNADELQDDEAYEDIV 315
Query: 408 XXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGGNQ 262
MR EG K+G P+PG+GKVF+EY+D DGATKAR GLNGRKF GNQ
Sbjct: 316 EDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQ 375
Query: 261 VVAVYYPENKFSQGEYDG 208
VVAV+YPENKFSQGEYDG
Sbjct: 376 VVAVFYPENKFSQGEYDG 393
>ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
gi|557527705|gb|ESR38955.1| hypothetical protein
CICLE_v10025221mg [Citrus clementina]
Length = 592
Score = 583 bits (1504), Expect = e-164
Identities = 297/380 (78%), Positives = 316/380 (83%), Gaps = 11/380 (2%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQ 1135
A Q+ G PAIPGMFPNMF L GQFG LP+MP QAMTQQATRHARRVYVGGL PTANEQ
Sbjct: 213 AGQIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 272
Query: 1134 TVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGA 955
+VATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGA
Sbjct: 273 SVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 332
Query: 954 PVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEA 775
PVKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTEA
Sbjct: 333 PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 392
Query: 774 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVR 595
QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VR
Sbjct: 393 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 452
Query: 594 RANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXX 415
RANQG QPKPEQES G++P+KVVCLTQVVS DEL+
Sbjct: 453 RANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEE 512
Query: 414 XXXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGG 268
MR EG K+GT PSPGVGKVF+EY+D DGATKAR G+NGRKFGG
Sbjct: 513 ILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGG 572
Query: 267 NQVVAVYYPENKFSQGEYDG 208
NQVVAV+YPENKF+QG+Y+G
Sbjct: 573 NQVVAVFYPENKFAQGDYEG 592
>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 583 bits (1504), Expect = e-164
Identities = 299/380 (78%), Positives = 314/380 (82%), Gaps = 11/380 (2%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQ 1135
A Q+ GT P IPGMFPNMF L GQFG LP+MP QAMTQQATRHARRVYVGGLSPTANEQ
Sbjct: 186 AGQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 245
Query: 1134 TVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGA 955
+VATFFSQVMSAIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGA
Sbjct: 246 SVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 305
Query: 954 PVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEA 775
PVKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTEA
Sbjct: 306 PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 365
Query: 774 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVR 595
QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VR
Sbjct: 366 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 425
Query: 594 RANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXX 415
RANQG +QPKPEQE+ GAL TKVVCLTQVV+ DELQ
Sbjct: 426 RANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNADELQDDEAYED 485
Query: 414 XXXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGG 268
MR EG K+G P+PG+GKVF+EY+D DGA KAR GLNGRKF G
Sbjct: 486 IVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDG 545
Query: 267 NQVVAVYYPENKFSQGEYDG 208
NQVVAV+YPENKFSQGEYDG
Sbjct: 546 NQVVAVFYPENKFSQGEYDG 565
>ref|XP_006466767.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
[Citrus sinensis]
Length = 380
Score = 583 bits (1503), Expect = e-164
Identities = 296/378 (78%), Positives = 315/378 (83%), Gaps = 11/378 (2%)
Frame = -2
Query: 1308 QMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQTV 1129
Q+ G PAIPGMFPNMF L GQFG LP+MP QAMTQQATRHARRVYVGGL PTANEQ+V
Sbjct: 3 QIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSV 62
Query: 1128 ATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAPV 949
ATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPV
Sbjct: 63 ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 122
Query: 948 KVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQI 769
KVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTEAQI
Sbjct: 123 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQI 182
Query: 768 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRRA 589
RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRRA
Sbjct: 183 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 242
Query: 588 NQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXXXX 409
NQG QPKPEQES G++P+KVVCLTQVVS DEL+
Sbjct: 243 NQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEIL 302
Query: 408 XXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGGNQ 262
MR EG K+GT PSPGVGKVF+EY+D DGATKAR G+NGRKFGGNQ
Sbjct: 303 EDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQ 362
Query: 261 VVAVYYPENKFSQGEYDG 208
VVAV+YPENKF+QG+Y+G
Sbjct: 363 VVAVFYPENKFAQGDYEG 380
>ref|XP_006466764.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Citrus sinensis]
Length = 581
Score = 579 bits (1492), Expect = e-162
Identities = 297/381 (77%), Positives = 316/381 (82%), Gaps = 12/381 (3%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTANE 1138
A Q+ G PAIPGMFPNMF L GQ FG LP+MP QAMTQQATRHARRVYVGGL PTANE
Sbjct: 201 AGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 260
Query: 1137 QTVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEG 958
Q+VATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEG
Sbjct: 261 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 320
Query: 957 APVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTE 778
APVKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTE
Sbjct: 321 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 380
Query: 777 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIV 598
AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL V
Sbjct: 381 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 440
Query: 597 RRANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXX 418
RRANQG QPKPEQES G++P+KVVCLTQVVS DEL+
Sbjct: 441 RRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYE 500
Query: 417 XXXXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFG 271
MR EG K+GT PSPGVGKVF+EY+D DGATKAR G+NGRKFG
Sbjct: 501 EILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFG 560
Query: 270 GNQVVAVYYPENKFSQGEYDG 208
GNQVVAV+YPENKF+QG+Y+G
Sbjct: 561 GNQVVAVFYPENKFAQGDYEG 581
>ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
gi|568824761|ref|XP_006466763.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X1 [Citrus
sinensis] gi|557527704|gb|ESR38954.1| hypothetical
protein CICLE_v10025221mg [Citrus clementina]
Length = 593
Score = 579 bits (1492), Expect = e-162
Identities = 297/381 (77%), Positives = 316/381 (82%), Gaps = 12/381 (3%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTANE 1138
A Q+ G PAIPGMFPNMF L GQ FG LP+MP QAMTQQATRHARRVYVGGL PTANE
Sbjct: 213 AGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 272
Query: 1137 QTVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEG 958
Q+VATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEG
Sbjct: 273 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 332
Query: 957 APVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTE 778
APVKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTE
Sbjct: 333 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 392
Query: 777 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIV 598
AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL V
Sbjct: 393 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 452
Query: 597 RRANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXX 418
RRANQG QPKPEQES G++P+KVVCLTQVVS DEL+
Sbjct: 453 RRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYE 512
Query: 417 XXXXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFG 271
MR EG K+GT PSPGVGKVF+EY+D DGATKAR G+NGRKFG
Sbjct: 513 EILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFG 572
Query: 270 GNQVVAVYYPENKFSQGEYDG 208
GNQVVAV+YPENKF+QG+Y+G
Sbjct: 573 GNQVVAVFYPENKFAQGDYEG 593
>ref|XP_006466765.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Citrus sinensis] gi|568824768|ref|XP_006466766.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X4 [Citrus sinensis]
Length = 394
Score = 578 bits (1491), Expect = e-162
Identities = 296/379 (78%), Positives = 315/379 (83%), Gaps = 12/379 (3%)
Frame = -2
Query: 1308 QMTGTPPAIPGMFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQT 1132
Q+ G PAIPGMFPNMF L GQ FG LP+MP QAMTQQATRHARRVYVGGL PTANEQ+
Sbjct: 16 QIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 75
Query: 1131 VATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAP 952
VATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAP
Sbjct: 76 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 135
Query: 951 VKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQ 772
VKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTEAQ
Sbjct: 136 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 195
Query: 771 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRR 592
IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRR
Sbjct: 196 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 255
Query: 591 ANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXXX 412
ANQG QPKPEQES G++P+KVVCLTQVVS DEL+
Sbjct: 256 ANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEI 315
Query: 411 XXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGGN 265
MR EG K+GT PSPGVGKVF+EY+D DGATKAR G+NGRKFGGN
Sbjct: 316 LEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGN 375
Query: 264 QVVAVYYPENKFSQGEYDG 208
QVVAV+YPENKF+QG+Y+G
Sbjct: 376 QVVAVFYPENKFAQGDYEG 394
>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 571 bits (1471), Expect = e-160
Identities = 294/379 (77%), Positives = 313/379 (82%), Gaps = 11/379 (2%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTANE 1138
A Q+ GT PAIPGMFP MF L GQ FG LP+MP QAMTQQATRHARRVYVGGL PTANE
Sbjct: 208 AGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 267
Query: 1137 QTVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEG 958
Q+VATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEG
Sbjct: 268 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 327
Query: 957 APVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTE 778
APVKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTE
Sbjct: 328 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 387
Query: 777 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIV 598
AQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL V
Sbjct: 388 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 447
Query: 597 RRANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXX 418
RRANQG QPKPEQES GA+ TKV+CLTQVV+ +EL
Sbjct: 448 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 507
Query: 417 XXXXXMRGEGRKYGT----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGG 268
MRGEG K+GT +PGVGKVF+EY+D D ATKARAGLNGRKFGG
Sbjct: 508 DIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGG 567
Query: 267 NQVVAVYYPENKFSQGEYD 211
NQV+AV+YPENKF+QGEYD
Sbjct: 568 NQVMAVFYPENKFAQGEYD 586
>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 571 bits (1471), Expect = e-160
Identities = 294/379 (77%), Positives = 313/379 (82%), Gaps = 11/379 (2%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTANE 1138
A Q+ GT PAIPGMFP MF L GQ FG LP+MP QAMTQQATRHARRVYVGGL PTANE
Sbjct: 208 AGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 267
Query: 1137 QTVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEG 958
Q+VATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEG
Sbjct: 268 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 327
Query: 957 APVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTE 778
APVKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTE
Sbjct: 328 APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 387
Query: 777 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIV 598
AQ+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL V
Sbjct: 388 AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 447
Query: 597 RRANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXX 418
RRANQG QPKPEQES GA+ TKV+CLTQVV+ +EL
Sbjct: 448 RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTKVLCLTQVVTPEELINDEDYE 507
Query: 417 XXXXXMRGEGRKYGT----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGG 268
MRGEG K+GT +PGVGKVF+EY+D D ATKARAGLNGRKFGG
Sbjct: 508 DIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGVGKVFLEYADIDSATKARAGLNGRKFGG 567
Query: 267 NQVVAVYYPENKFSQGEYD 211
NQV+AV+YPENKF+QGEYD
Sbjct: 568 NQVMAVFYPENKFAQGEYD 586
>gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 567 bits (1462), Expect = e-159
Identities = 288/377 (76%), Positives = 308/377 (81%), Gaps = 10/377 (2%)
Frame = -2
Query: 1308 QMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQTV 1129
Q+TG PA+PG+FPNMFSLP GQ G LP+MP QAMTQQATRHARRVYVGGL PTANEQ+V
Sbjct: 194 QVTGAAPAVPGVFPNMFSLPTGQLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSV 253
Query: 1128 ATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAPV 949
ATFFS VMSAIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPV
Sbjct: 254 ATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 313
Query: 948 KVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQI 769
KVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTE QI
Sbjct: 314 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEGQI 373
Query: 768 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRRA 589
RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRRA
Sbjct: 374 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 433
Query: 588 NQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXXXX 409
NQG QPKPEQES G L TKV+CLTQVVS DEL+
Sbjct: 434 NQGVTQPKPEQESVLLHAQQQIALQKLMLQPGTLATKVLCLTQVVSADELRDDEDYADIL 493
Query: 408 XXMRGEGRKY----------GTXXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGGNQV 259
MR E K+ P+PGVGKVF+EY+D + A KAR GL+GR+FGGNQV
Sbjct: 494 EDMRLECGKFTLVNLVIPRPSPTGDPTPGVGKVFLEYADVESANKARQGLHGRRFGGNQV 553
Query: 258 VAVYYPENKFSQGEYDG 208
VAV+YPEN+FSQG+YDG
Sbjct: 554 VAVFYPENRFSQGDYDG 570
>ref|XP_006466768.1| PREDICTED: splicing factor U2af large subunit B-like isoform X6
[Citrus sinensis]
Length = 368
Score = 564 bits (1454), Expect = e-158
Identities = 289/368 (78%), Positives = 307/368 (83%), Gaps = 12/368 (3%)
Frame = -2
Query: 1275 MFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQTVATFFSQVMSA 1099
MFPNMF L GQ FG LP+MP QAMTQQATRHARRVYVGGL PTANEQ+VATFFSQVM+A
Sbjct: 1 MFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAA 60
Query: 1098 IGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAPVKVRRPSDYNP 919
IGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPVKVRRPSDYNP
Sbjct: 61 IGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNP 120
Query: 918 SLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 739
SLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTEAQIRELLESFGPL
Sbjct: 121 SLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPL 180
Query: 738 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRRANQGTAQPKPE 559
RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRRANQG QPKPE
Sbjct: 181 RGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGANQPKPE 240
Query: 558 QESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXXXXXXMRGEGRKY 379
QES G++P+KVVCLTQVVS DEL+ MR EG K+
Sbjct: 241 QESVLLHAQQQIALQRLMLQPGSVPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKF 300
Query: 378 GT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGGNQVVAVYYPENK 232
GT PSPGVGKVF+EY+D DGATKAR G+NGRKFGGNQVVAV+YPENK
Sbjct: 301 GTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENK 360
Query: 231 FSQGEYDG 208
F+QG+Y+G
Sbjct: 361 FAQGDYEG 368
>ref|XP_002310209.2| hypothetical protein POPTR_0007s12550g [Populus trichocarpa]
gi|550334732|gb|EEE90659.2| hypothetical protein
POPTR_0007s12550g [Populus trichocarpa]
Length = 565
Score = 564 bits (1454), Expect = e-158
Identities = 287/378 (75%), Positives = 311/378 (82%), Gaps = 11/378 (2%)
Frame = -2
Query: 1311 VQMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQT 1132
+Q+TGT P IPGMFPNMF L GQFG LP+MP QAMTQQATRHARRVYVGGL P ANEQ+
Sbjct: 187 LQITGTTPPIPGMFPNMFPLGTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPIANEQS 246
Query: 1131 VATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAP 952
VATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAP
Sbjct: 247 VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 306
Query: 951 VKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQ 772
VKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTEAQ
Sbjct: 307 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 366
Query: 771 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRR 592
IRELLESFG LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRR
Sbjct: 367 IRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 426
Query: 591 ANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXXX 412
ANQGT QPKPEQE+ + TKVVCLTQVV++DEL+
Sbjct: 427 ANQGTNQPKPEQENVLLHAQQQIALQRLMLQPPPVVTKVVCLTQVVTVDELKDDDEYEDI 486
Query: 411 XXXMRGEGRKYG-----------TXXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGGN 265
+R E K+G +PGVGKVF+EY+DT+G++KARAG+NGRKFGGN
Sbjct: 487 LEDIRMEAGKFGQLVNVVIPRPRPDGENAPGVGKVFLEYADTEGSSKARAGMNGRKFGGN 546
Query: 264 QVVAVYYPENKFSQGEYD 211
VVAV++PENKFSQGEYD
Sbjct: 547 HVVAVFFPENKFSQGEYD 564
>ref|XP_007203764.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
gi|462399295|gb|EMJ04963.1| hypothetical protein
PRUPE_ppa003118mg [Prunus persica]
Length = 601
Score = 561 bits (1445), Expect = e-157
Identities = 291/383 (75%), Positives = 312/383 (81%), Gaps = 14/383 (3%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTANE 1138
A Q+ GT P IPGMFPNMF L GQ FG+LP+MP QAMTQQATRHARRVYVGGL PTANE
Sbjct: 219 AGQIPGTSPTIPGMFPNMFPLATGQQFGSLPVMPVQAMTQQATRHARRVYVGGLPPTANE 278
Query: 1137 QTVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEG 958
Q+VATFFSQVM+AIGGNT PGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEG
Sbjct: 279 QSVATFFSQVMAAIGGNTAAPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 338
Query: 957 APVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTE 778
APVKVRRPSDYNPSLAA LGPSQPSPNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTE
Sbjct: 339 APVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 398
Query: 777 AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIV 598
AQI+ELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL V
Sbjct: 399 AQIKELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 458
Query: 597 RRANQGTAQPKPEQES--XXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXX 424
RRANQG QPKPEQES ++ TKVVCLTQVV+ DEL+
Sbjct: 459 RRANQGANQPKPEQESVLLHAQQQIALQRFMLLQPPSSVATKVVCLTQVVTADELRDDDE 518
Query: 423 XXXXXXXMRGEGRKYG-----------TXXXPSPGVGKVFMEYSDTDGATKARAGLNGRK 277
MR EG K+G P PGVGKVF+EY+D DG+TKAR GLNGRK
Sbjct: 519 YEDILEDMRLEGGKFGPLVNVIIPRPRPDGEPLPGVGKVFLEYADVDGSTKARTGLNGRK 578
Query: 276 FGGNQVVAVYYPENKFSQGEYDG 208
FGGNQVVAV+YPE+KF+QG+Y+G
Sbjct: 579 FGGNQVVAVFYPEDKFAQGDYEG 601
>ref|XP_007046989.1| Splicing factor U2af large subunit A isoform 1 [Theobroma cacao]
gi|508699250|gb|EOX91146.1| Splicing factor U2af large
subunit A isoform 1 [Theobroma cacao]
Length = 584
Score = 560 bits (1443), Expect = e-157
Identities = 285/377 (75%), Positives = 307/377 (81%), Gaps = 11/377 (2%)
Frame = -2
Query: 1308 QMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQTV 1129
Q+ GT PA+PG+FPNMF L GQFG LP+MP QAMTQQATRHARRVYVGGL PTANEQ+V
Sbjct: 207 QIPGTNPALPGVFPNMFPLATGQFGALPVMPIQAMTQQATRHARRVYVGGLPPTANEQSV 266
Query: 1128 ATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAPV 949
AT+FSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPV
Sbjct: 267 ATYFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 326
Query: 948 KVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQI 769
KVRRPSDYNPSLAA LGPSQP+PNLNLAAVGL+PGSAG LEGPDRIFVGGLPYYFTEAQI
Sbjct: 327 KVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQI 386
Query: 768 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRRA 589
RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRRA
Sbjct: 387 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 446
Query: 588 NQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXXXX 409
NQGT QPKPEQES LPTKVVCLTQ +S D+L+
Sbjct: 447 NQGTTQPKPEQESILQHAQQQIALQRLMLQPQGLPTKVVCLTQALSEDDLRDDEEYDDIV 506
Query: 408 XXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGGNQ 262
MR EG K+G PS GVGKVF+EYSD +G+ KA+A +NGRKFG NQ
Sbjct: 507 EDMRQEGGKHGVLVNVVIPRPNLNGEPSAGVGKVFLEYSDVEGSRKAQAAMNGRKFGDNQ 566
Query: 261 VVAVYYPENKFSQGEYD 211
V+AV+YPENKF Q EYD
Sbjct: 567 VIAVFYPENKFVQEEYD 583
>gb|EXB59126.1| Splicing factor U2af large subunit B [Morus notabilis]
Length = 599
Score = 557 bits (1436), Expect = e-156
Identities = 290/381 (76%), Positives = 309/381 (81%), Gaps = 13/381 (3%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQ 1135
A Q+ GT +PGMFPNMF L GQFG LP+MP QAMTQQATRHARRVYVGGL PTANEQ
Sbjct: 219 AGQIPGTT-TMPGMFPNMFPLATGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 277
Query: 1134 TVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGA 955
+VATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGA
Sbjct: 278 SVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 337
Query: 954 PVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEA 775
PVKVRRPSDYNPSLAA LGPS P+PNLNLAAVGLTPGSAG LEGPDRIFVGGLPYYFTEA
Sbjct: 338 PVKVRRPSDYNPSLAATLGPSLPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 397
Query: 774 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVR 595
QI+ELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VR
Sbjct: 398 QIKELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 457
Query: 594 RANQGTAQPKPEQES--XXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXX 421
RANQG QPKPEQES GA +KVVCLTQVVS DEL+
Sbjct: 458 RANQGANQPKPEQESVLLHAQQQIALQRFMLLQQPGAATSKVVCLTQVVSADELRDDEEY 517
Query: 420 XXXXXXMRGEGRKYG-----------TXXXPSPGVGKVFMEYSDTDGATKARAGLNGRKF 274
M+ EG K+G P PGVGKVF+EY + +GA+KARAGLNGRKF
Sbjct: 518 EDIMEDMKQEGEKFGPLVRVVIPRPRPDGEPMPGVGKVFLEYVEVEGASKARAGLNGRKF 577
Query: 273 GGNQVVAVYYPENKFSQGEYD 211
GGNQVVAV+YPENKF+QGEYD
Sbjct: 578 GGNQVVAVFYPENKFAQGEYD 598
>ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Populus trichocarpa]
gi|550338812|gb|ERP61027.1| hypothetical protein
POPTR_0005s12700g [Populus trichocarpa]
Length = 588
Score = 557 bits (1435), Expect = e-156
Identities = 287/381 (75%), Positives = 309/381 (81%), Gaps = 15/381 (3%)
Frame = -2
Query: 1308 QMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQTV 1129
Q+ GT P IPGMFPNMF L QFG LP+MP QAMTQQATRHARRVYVGGL PTANEQ+V
Sbjct: 207 QIAGTTPPIPGMFPNMFPLGTSQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSV 266
Query: 1128 ATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAPV 949
ATFFSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAPV
Sbjct: 267 ATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPV 326
Query: 948 KVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQI 769
KVRRPSDYNPSLAA LGPSQP+PNLNL+AVGL PGSAG LEGPDRIFVGGLPYYFTE+QI
Sbjct: 327 KVRRPSDYNPSLAATLGPSQPNPNLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTESQI 386
Query: 768 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRRA 589
RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRRA
Sbjct: 387 RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRA 446
Query: 588 NQGTAQPKPEQES----XXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXX 421
NQGT QPKPEQE+ +PTKVVCLTQVV+ DEL+
Sbjct: 447 NQGTNQPKPEQENVLLHAQQQIALQRLMLQPQPQQQPVPTKVVCLTQVVTGDELKDDDEY 506
Query: 420 XXXXXXMRGEGRKYG-----------TXXXPSPGVGKVFMEYSDTDGATKARAGLNGRKF 274
MR E K+G +PGVGKVF+EY+DT+G++KARAG+NGRKF
Sbjct: 507 EDILEDMRTEAGKFGQLVNVVIPRPRPNGENAPGVGKVFLEYADTEGSSKARAGMNGRKF 566
Query: 273 GGNQVVAVYYPENKFSQGEYD 211
GNQVVAV+YPENKFSQGEYD
Sbjct: 567 DGNQVVAVFYPENKFSQGEYD 587
>sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor,
large subunit [Nicotiana plumbaginifolia]
Length = 555
Score = 556 bits (1433), Expect = e-156
Identities = 282/379 (74%), Positives = 306/379 (80%), Gaps = 11/379 (2%)
Frame = -2
Query: 1314 AVQMTGTPPAIPGMFPNMFSLPPGQFGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQ 1135
A Q+ GT PAIPG+F NMF L QFG LPMMP QAMTQQATRHARRVYVGGL PTANEQ
Sbjct: 176 AGQVPGTNPAIPGLFSNMFPLASSQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQ 235
Query: 1134 TVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGA 955
+VATFFS VM AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDG++FEG
Sbjct: 236 SVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGG 295
Query: 954 PVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEA 775
PVKVRRPSDYNPSLAA LGPSQPSPNLNLAAVG TPGS+G LEGPDRIFVGGLPYYFTE+
Sbjct: 296 PVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTES 355
Query: 774 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVR 595
QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTDIACAALNGIKMGDKTL VR
Sbjct: 356 QIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 415
Query: 594 RANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXX 415
RANQGT QP PEQES GAL TKV+CLT+VV++DEL
Sbjct: 416 RANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQD 475
Query: 414 XXXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGG 268
MR E K+G P+PG+GKVF+EY+D DG++KAR GLNGRKFGG
Sbjct: 476 ILEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGG 535
Query: 267 NQVVAVYYPENKFSQGEYD 211
NQVVAV+YPENKFS+G+Y+
Sbjct: 536 NQVVAVFYPENKFSEGDYE 554
>ref|XP_007009943.1| Splicing factor U2af large subunit A isoform 1 [Theobroma cacao]
gi|508726856|gb|EOY18753.1| Splicing factor U2af large
subunit A isoform 1 [Theobroma cacao]
Length = 591
Score = 555 bits (1431), Expect = e-155
Identities = 282/383 (73%), Positives = 308/383 (80%), Gaps = 12/383 (3%)
Frame = -2
Query: 1320 SFAVQMTGTPPAIPGMFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTA 1144
SF Q+ GT P +PG+FPNMF L GQ FG LP+MP QAMTQQATRHARRVYVGGL PTA
Sbjct: 209 SFDGQIPGTSPTLPGVFPNMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTA 268
Query: 1143 NEQTVATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVF 964
NEQ+VATFFS VM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMA+DGI+F
Sbjct: 269 NEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMAVDGIIF 328
Query: 963 EGAPVKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYF 784
EGAPVKVRRPSDYNPSLAA LGPSQP+P+LNLAAVGLTPGSAG LEGPDRIFVGGLPYYF
Sbjct: 329 EGAPVKVRRPSDYNPSLAATLGPSQPNPSLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYF 388
Query: 783 TEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL 604
TEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL
Sbjct: 389 TEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL 448
Query: 603 IVRRANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXX 424
VRRANQG QPKPEQES +PT VVCLTQ +++D+L+
Sbjct: 449 TVRRANQGATQPKPEQESILQHAQQQIALQRLILQPQGVPTNVVCLTQALNVDDLRDDEE 508
Query: 423 XXXXXXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRK 277
MR EG KYG +PGVGKVF+EY D +G+ KA+ +NGRK
Sbjct: 509 YEDIVEDMRQEGGKYGALVNVVIPRPNPSGEAAPGVGKVFLEYLDDEGSKKAQGAMNGRK 568
Query: 276 FGGNQVVAVYYPENKFSQGEYDG 208
FGGNQV+AV+YPENKF+QGEYDG
Sbjct: 569 FGGNQVIAVFYPENKFAQGEYDG 591
>ref|XP_007046990.1| Splicing factor U2af large subunit A isoform 2 [Theobroma cacao]
gi|508699251|gb|EOX91147.1| Splicing factor U2af large
subunit A isoform 2 [Theobroma cacao]
Length = 585
Score = 555 bits (1431), Expect = e-155
Identities = 285/378 (75%), Positives = 307/378 (81%), Gaps = 12/378 (3%)
Frame = -2
Query: 1308 QMTGTPPAIPGMFPNMFSLPPGQ-FGTLPMMPFQAMTQQATRHARRVYVGGLSPTANEQT 1132
Q+ GT PA+PG+FPNMF L GQ FG LP+MP QAMTQQATRHARRVYVGGL PTANEQ+
Sbjct: 207 QIPGTNPALPGVFPNMFPLATGQQFGALPVMPIQAMTQQATRHARRVYVGGLPPTANEQS 266
Query: 1131 VATFFSQVMSAIGGNTVGPGDAVVNVYINHDKKFAFVEMRSVEEASNAMALDGIVFEGAP 952
VAT+FSQVM+AIGGNT GPGDAVVNVYINH+KKFAFVEMRSVEEASNAMALDGI+FEGAP
Sbjct: 267 VATYFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 326
Query: 951 VKVRRPSDYNPSLAAALGPSQPSPNLNLAAVGLTPGSAGSLEGPDRIFVGGLPYYFTEAQ 772
VKVRRPSDYNPSLAA LGPSQP+PNLNLAAVGL+PGSAG LEGPDRIFVGGLPYYFTEAQ
Sbjct: 327 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQ 386
Query: 771 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLIVRR 592
IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTL VRR
Sbjct: 387 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 446
Query: 591 ANQGTAQPKPEQESXXXXXXXXXXXXXXXXXVGALPTKVVCLTQVVSIDELQXXXXXXXX 412
ANQGT QPKPEQES LPTKVVCLTQ +S D+L+
Sbjct: 447 ANQGTTQPKPEQESILQHAQQQIALQRLMLQPQGLPTKVVCLTQALSEDDLRDDEEYDDI 506
Query: 411 XXXMRGEGRKYGT-----------XXXPSPGVGKVFMEYSDTDGATKARAGLNGRKFGGN 265
MR EG K+G PS GVGKVF+EYSD +G+ KA+A +NGRKFG N
Sbjct: 507 VEDMRQEGGKHGVLVNVVIPRPNLNGEPSAGVGKVFLEYSDVEGSRKAQAAMNGRKFGDN 566
Query: 264 QVVAVYYPENKFSQGEYD 211
QV+AV+YPENKF Q EYD
Sbjct: 567 QVIAVFYPENKFVQEEYD 584