BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00023116
         (553 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   244   8e-63
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   244   8e-63
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   241   7e-62
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   240   2e-61
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              238   6e-61
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   238   6e-61
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   235   6e-60
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   234   8e-60
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   234   8e-60
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   233   2e-59
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   233   3e-59
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   233   3e-59
ref|XP_004968861.1| PREDICTED: probable RNA-dependent RNA polyme...   232   5e-59
ref|XP_006645957.1| PREDICTED: probable RNA-dependent RNA polyme...   231   9e-59
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   231   9e-59
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     231   9e-59
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    231   1e-58
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]         230   2e-58
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...   230   2e-58
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     230   2e-58

>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  244 bits (624), Expect = 8e-63
 Identities = 114/185 (61%), Positives = 145/185 (78%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDA-SDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKC 178
            +YKS KILGK+YR+I+DA  D D+++S E++  P DV YD DLE+ G+EDFI  AW+ KC
Sbjct: 985  SYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKC 1044

Query: 179  SYEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFM 358
            SY+GQL+ LLGQY V+ EEEIVTGH+WS+P Y SRK G++KEK+K +Y  LKK+F+ +F 
Sbjct: 1045 SYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFE 1104

Query: 359  NIGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPV 538
            N+G + +QLT DE NALYE+KASAWYQV+YHP W+KKSLELR P   +A  MLSF WI  
Sbjct: 1105 NLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAA 1164

Query: 539  DYLVR 553
            DYL R
Sbjct: 1165 DYLAR 1169


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  244 bits (624), Expect = 8e-63
 Identities = 114/185 (61%), Positives = 145/185 (78%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDA-SDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKC 178
            +YKS KILGK+YR+I+DA  D D+++S E++  P DV YD DLE+ G+EDFI  AW+ KC
Sbjct: 985  SYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKC 1044

Query: 179  SYEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFM 358
            SY+GQL+ LLGQY V+ EEEIVTGH+WS+P Y SRK G++KEK+K +Y  LKK+F+ +F 
Sbjct: 1045 SYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFE 1104

Query: 359  NIGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPV 538
            N+G + +QLT DE NALYE+KASAWYQV+YHP W+KKSLELR P   +A  MLSF WI  
Sbjct: 1105 NLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAA 1164

Query: 539  DYLVR 553
            DYL R
Sbjct: 1165 DYLAR 1169


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  241 bits (616), Expect = 7e-62
 Identities = 111/184 (60%), Positives = 143/184 (77%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKSNKILG+LYR+ KDA D DI  SSE+   P D+ YDTDLE+P S DFI +AWN KCS
Sbjct: 986  SYKSNKILGRLYRQSKDAYDEDISVSSEVDINPVDIHYDTDLEVPESVDFIADAWNQKCS 1045

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQLN LL QY V+ EEE+VTGH+WS+P YNSRK G++KE++K +Y  L+KEF+ +F  
Sbjct: 1046 YDGQLNGLLEQYKVNREEELVTGHIWSMPKYNSRKQGELKERLKHSYSALRKEFRQVFEK 1105

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            +  D + L+EDE NAL+E+KASAWYQV+YHP+WVKKSL+L+     ++  +LSFAWI  D
Sbjct: 1106 MDSDCELLSEDEKNALFERKASAWYQVTYHPEWVKKSLDLQEQDSARSVVLLSFAWIAND 1165

Query: 542  YLVR 553
            YL R
Sbjct: 1166 YLAR 1169


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  240 bits (612), Expect = 2e-61
 Identities = 109/184 (59%), Positives = 141/184 (76%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILG+LYR+IKDA D D+ +SSE++  P D+PYD+DLE+ G+ D+I +AW+ KCS
Sbjct: 989  SYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSDLEVVGASDYISDAWDQKCS 1048

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQLN LL QY V  EEE+VTGH+WS+P Y+SRK G++K+++K +Y+ LKKEF+ IF  
Sbjct: 1049 YDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEK 1108

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            +  + +QL + E N LYEQKASAWYQV YHP WVKKSLEL+ P       MLSFAWI  D
Sbjct: 1109 MDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAGTSVMLSFAWIAAD 1168

Query: 542  YLVR 553
            YL R
Sbjct: 1169 YLAR 1172


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  238 bits (608), Expect = 6e-61
 Identities = 116/185 (62%), Positives = 138/185 (74%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            TY+SNKILGK+YR+IKDA + D+  SSE     + VP+D DL +PGS DFI++AW  KCS
Sbjct: 823  TYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCS 882

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQLN LLGQY V  EEE+VTGHVWS+P Y SRK G++ E++K AY  LKKEF+ IF  
Sbjct: 883  YDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEK 942

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAP-AMLSFAWIPV 538
            +  D  QLT+DE N LYEQKASAWYQV+YHP WVKKSLEL+ P E      MLSFAWI  
Sbjct: 943  MNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITA 1002

Query: 539  DYLVR 553
            DYL R
Sbjct: 1003 DYLAR 1007


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  238 bits (608), Expect = 6e-61
 Identities = 116/185 (62%), Positives = 138/185 (74%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            TY+SNKILGK+YR+IKDA + D+  SSE     + VP+D DL +PGS DFI++AW  KCS
Sbjct: 985  TYRSNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCS 1044

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQLN LLGQY V  EEE+VTGHVWS+P Y SRK G++ E++K AY  LKKEF+ IF  
Sbjct: 1045 YDGQLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEK 1104

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAP-AMLSFAWIPV 538
            +  D  QLT+DE N LYEQKASAWYQV+YHP WVKKSLEL+ P E      MLSFAWI  
Sbjct: 1105 MNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITA 1164

Query: 539  DYLVR 553
            DYL R
Sbjct: 1165 DYLAR 1169


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  235 bits (599), Expect = 6e-60
 Identities = 109/190 (57%), Positives = 139/190 (73%), Gaps = 6/190 (3%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDA------SDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNA 163
            +Y SNKILG+LYR++KD        D D  +SSE++    D+PYD DLE+ GS D+I +A
Sbjct: 986  SYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSGSSDYILDA 1045

Query: 164  WNLKCSYEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEF 343
            W+ KCSY+GQL  LL QY V  EEE+VTGH+WS+P  NSRK G++KE++K +YH LKKEF
Sbjct: 1046 WDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEF 1105

Query: 344  KNIFMNIGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSF 523
            + +F  +  D +QLTEDE N LYEQKASAWYQV+YHP+WV KS+EL+ P      +MLSF
Sbjct: 1106 RQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNKSMELQEPDAAGCASMLSF 1165

Query: 524  AWIPVDYLVR 553
            AWI  DYL R
Sbjct: 1166 AWIAADYLAR 1175


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  234 bits (598), Expect = 8e-60
 Identities = 110/184 (59%), Positives = 135/184 (73%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            TYKSNKILG+LYR +K+  D D  +SSE S  P  +PYD  LE+PG ED I  AW  KCS
Sbjct: 985  TYKSNKILGRLYRPVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCS 1044

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQL  LLGQY V  EEEIVTGH+WS+P Y S+K G++KE++K +Y+ LKKEF+ +F  
Sbjct: 1045 YDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEE 1104

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
               D + L+E+E N LYE+KASAWY V+YHP+WVKKSLEL+ P E    AMLSFAWI  D
Sbjct: 1105 TIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAAD 1164

Query: 542  YLVR 553
            YL R
Sbjct: 1165 YLAR 1168


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  234 bits (598), Expect = 8e-60
 Identities = 105/184 (57%), Positives = 139/184 (75%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILGKLYR++KD  D +   S+ +   P+D+PYDT LE+ GS  FID+AWN KCS
Sbjct: 986  SYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCS 1045

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQLN LLGQY V+ EEE+VTGH+WS+P Y+++K G++KE++K AY+ L+KEF+N+F  
Sbjct: 1046 YDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFER 1105

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            +  D   L +DE N +YE+KASAWYQV+YHP WV +SLEL+ P    +  MLSFAWI  D
Sbjct: 1106 MEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQIPDAVSSTVMLSFAWIAAD 1165

Query: 542  YLVR 553
            YL R
Sbjct: 1166 YLAR 1169


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
            gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
            Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
            AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
            Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
            Full=RNA-directed RNA polymerase 6
            gi|12324444|gb|AAG52184.1|AC012329_11 putative
            RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
            thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
            polymerase-like protein [Arabidopsis thaliana]
            gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
            gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
            6 [Arabidopsis thaliana]
          Length = 1196

 Score =  233 bits (595), Expect = 2e-59
 Identities = 109/184 (59%), Positives = 135/184 (73%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            TYKSNKILG+LYR++K+  D D  +SSE S  P  +PYD  LE+PG ED I  AW  KC 
Sbjct: 985  TYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCL 1044

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQL  LLGQY V  EEEIVTGH+WS+P Y S+K G++KE++K +Y+ LKKEF+ +F  
Sbjct: 1045 YDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEE 1104

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
               D + L+E+E N LYE+KASAWY V+YHP+WVKKSLEL+ P E    AMLSFAWI  D
Sbjct: 1105 TIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAAD 1164

Query: 542  YLVR 553
            YL R
Sbjct: 1165 YLAR 1168


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
            arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
            arietinum]
          Length = 1201

 Score =  233 bits (593), Expect = 3e-59
 Identities = 110/191 (57%), Positives = 141/191 (73%), Gaps = 7/191 (3%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILG+LYR+IKDA D DI  + +++CA  D+ YDTDLE+PGS DFI +AW  KCS
Sbjct: 984  SYKSKKILGRLYRQIKDAYDKDI-DAPDLNCASSDIHYDTDLEVPGSADFISDAWYQKCS 1042

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQL+ LLGQY V TEEE+VTG +WS+P YNSRK G++KE++K +Y  LKKEF+  F  
Sbjct: 1043 YDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRQTFEK 1102

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPA-------MLS 520
            +  D  +L+++E N LYEQKASAWYQV+YHP+WVK+S +L+    D   A       MLS
Sbjct: 1103 LNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDLKVKSSDNQEADSLGNMVMLS 1162

Query: 521  FAWIPVDYLVR 553
            F WI VDYL R
Sbjct: 1163 FPWIAVDYLAR 1173


>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
            arietinum]
          Length = 1247

 Score =  233 bits (593), Expect = 3e-59
 Identities = 110/191 (57%), Positives = 141/191 (73%), Gaps = 7/191 (3%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILG+LYR+IKDA D DI  + +++CA  D+ YDTDLE+PGS DFI +AW  KCS
Sbjct: 1030 SYKSKKILGRLYRQIKDAYDKDI-DAPDLNCASSDIHYDTDLEVPGSADFISDAWYQKCS 1088

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQL+ LLGQY V TEEE+VTG +WS+P YNSRK G++KE++K +Y  LKKEF+  F  
Sbjct: 1089 YDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRQTFEK 1148

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPA-------MLS 520
            +  D  +L+++E N LYEQKASAWYQV+YHP+WVK+S +L+    D   A       MLS
Sbjct: 1149 LNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDLKVKSSDNQEADSLGNMVMLS 1208

Query: 521  FAWIPVDYLVR 553
            F WI VDYL R
Sbjct: 1209 FPWIAVDYLAR 1219


>ref|XP_004968861.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria
            italica]
          Length = 1211

 Score =  232 bits (591), Expect = 5e-59
 Identities = 107/184 (58%), Positives = 141/184 (76%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            TYKS+KILG+LYR I++AS  D++   E +C   D+PYDTD+E+PG+ DF+ +AW  KCS
Sbjct: 1002 TYKSDKILGRLYRSIQEASSSDLVP--EETCTLNDLPYDTDMEVPGATDFLSSAWLCKCS 1059

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            YE QLNALL QY V TE E+VT H+WSLP Y+SRK GDIKE++K++Y  L+KE ++ F +
Sbjct: 1060 YEAQLNALLNQYGVRTEAELVTEHIWSLPKYSSRKQGDIKERLKNSYSALRKELRSTFES 1119

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            I  D  +++EDE N +YE KASAWYQV+YHP+WV+KS E+  P  ++ PA LSFAWI VD
Sbjct: 1120 IETDETEISEDEKNRVYEMKASAWYQVTYHPKWVQKSREMLGPDCEEMPARLSFAWIAVD 1179

Query: 542  YLVR 553
            YL R
Sbjct: 1180 YLAR 1183


>ref|XP_006645957.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Oryza
            brachyantha]
          Length = 1105

 Score =  231 bits (589), Expect = 9e-59
 Identities = 109/184 (59%), Positives = 140/184 (76%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILG+LYR I++AS+GD++S  E  C P D+PYD DLE+PG+ DF+ +AW  KCS
Sbjct: 896  SYKSEKILGRLYRSIQEASNGDVVS--EEVCTPNDLPYDIDLEVPGASDFLASAWQCKCS 953

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            YE QL+ALL QY V TE E+VTG++ S+  YNS+K G+IKE++K AY  L+KEF++ F +
Sbjct: 954  YEAQLSALLNQYKVHTEAELVTGNITSVTKYNSKKQGEIKERLKQAYSALRKEFRSTFES 1013

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            I  D  +L EDE N LYE KASAWYQV+YHP+WV+KS  +  P  +  PA LSFAWIPVD
Sbjct: 1014 IASDQCELGEDEKNLLYEMKASAWYQVTYHPKWVEKSRGMLDPDGEGMPARLSFAWIPVD 1073

Query: 542  YLVR 553
            YLVR
Sbjct: 1074 YLVR 1077


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1188

 Score =  231 bits (589), Expect = 9e-59
 Identities = 110/189 (58%), Positives = 139/189 (73%), Gaps = 7/189 (3%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILG+LYR+IKDA D DI  + E +C   D+ YDTDLE+PGS +FI +AW  +CS
Sbjct: 971  SYKSKKILGRLYRRIKDAYDKDI-DAPEFNCVSSDILYDTDLEVPGSSEFIADAWEQRCS 1029

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQL+ LLGQY V TEEE+VTG +WS+P YNSRK G++KE++K +Y  LKKEF+ IF  
Sbjct: 1030 YDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRQIFEK 1089

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPA-------MLS 520
            +  D  +L++ E N LYEQKASAWYQV+YHP+WVKKSL+L+    D   A       MLS
Sbjct: 1090 LKSDVGELSDKEKNLLYEQKASAWYQVTYHPKWVKKSLDLQLKSSDNQSADSLGNMVMLS 1149

Query: 521  FAWIPVDYL 547
            F WI VDYL
Sbjct: 1150 FPWIAVDYL 1158


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  231 bits (589), Expect = 9e-59
 Identities = 103/184 (55%), Positives = 139/184 (75%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILGKLYR++KD  D +   S+ +   P D+PYD+ LE+PGS  FID+AWN KCS
Sbjct: 986  SYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAWNSKCS 1045

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQL+ LLGQY V+ EEE+VTGH+WS+P Y+++K G++KE++K AY+ L+KEF+N+F  
Sbjct: 1046 YDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFER 1105

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            +  D   L +DE N +YE+KASAWYQV+Y+P WV +SLEL+ P    +  MLSFAWI  D
Sbjct: 1106 MEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAAD 1165

Query: 542  YLVR 553
            YL R
Sbjct: 1166 YLAR 1169


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  231 bits (588), Expect = 1e-58
 Identities = 103/184 (55%), Positives = 139/184 (75%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILGKLYR++KD  D +   S+ +   P+D+PYDT L +PGS  FID+AWN KCS
Sbjct: 986  SYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLVIPGSTVFIDDAWNSKCS 1045

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQL+ LLGQY V+ EEE+VTGH+WS+P Y+++K G++KE++K AY+ L+KEF+N+F  
Sbjct: 1046 YDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFER 1105

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            +  D   L +DE N +YE+KASAWYQV+Y+P WV +SLEL+ P    +  MLSFAWI  D
Sbjct: 1106 MDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAISSTVMLSFAWIAAD 1165

Query: 542  YLVR 553
            YL R
Sbjct: 1166 YLAR 1169


>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
          Length = 1195

 Score =  230 bits (586), Expect = 2e-58
 Identities = 112/184 (60%), Positives = 136/184 (73%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKSNKILG+LYR+IKD  + D   +S       D+PYDTDL+ PGS  F+ +AW  KC 
Sbjct: 987  SYKSNKILGRLYRRIKDVYNDD---TSNADFVTGDIPYDTDLDKPGSAGFLLDAWAQKCL 1043

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+ QL +LLGQY V  EEEIVTGHVWS+P Y SRK G++KE++K +Y VLKKEF+ IF N
Sbjct: 1044 YDWQLTSLLGQYKVKREEEIVTGHVWSMPRYTSRKEGELKERLKHSYSVLKKEFRQIFEN 1103

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            +  + +QLTEDE N LYEQKASAWYQV YHP+WV KS EL+ P   + P MLSFAWI VD
Sbjct: 1104 MHPEFEQLTEDEKNILYEQKASAWYQVCYHPKWVDKSRELQEPVCAENPLMLSFAWIAVD 1163

Query: 542  YLVR 553
            YL R
Sbjct: 1164 YLAR 1167


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
            gi|462422376|gb|EMJ26639.1| hypothetical protein
            PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  230 bits (586), Expect = 2e-58
 Identities = 106/185 (57%), Positives = 138/185 (74%), Gaps = 1/185 (0%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILG+LYRK++DA D D  +SSE+   P D+PYD DLE+PG+ DF+ +AW  KCS
Sbjct: 984  SYKSTKILGRLYRKVRDAYDEDAATSSELHYFPSDIPYDMDLEVPGAADFVFDAWEKKCS 1043

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQL  L+GQY V  EEEIVTGHVWS+P  NS+K G++KE++  +Y+ LKKEF+ +F N
Sbjct: 1044 YDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQGELKERLSHSYNALKKEFRQMFEN 1103

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAP-GEDKAPAMLSFAWIPV 538
            +  + + LT+DE N L E+KASAWYQV+YHP+WVK+S  L+ P G      MLSFAWI  
Sbjct: 1104 LDSNLEALTDDEKNLLCEKKASAWYQVTYHPKWVKQSPPLQEPDGPGDVVVMLSFAWIAA 1163

Query: 539  DYLVR 553
            DYL R
Sbjct: 1164 DYLAR 1168


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  230 bits (586), Expect = 2e-58
 Identities = 104/184 (56%), Positives = 137/184 (74%)
 Frame = +2

Query: 2    TYKSNKILGKLYRKIKDASDGDILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCS 181
            +YKS KILGKLYR++KD  D +   S+ +   P+D+PYDT LE+ GS  FID+AWN KCS
Sbjct: 986  SYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCS 1045

Query: 182  YEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMN 361
            Y+GQLN LLGQY V+ EEE+VTG++WS+P YN++K G++KE++K AY+ L+KEF+N+F  
Sbjct: 1046 YDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAKKQGELKERLKHAYNTLRKEFRNVFER 1105

Query: 362  IGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSFAWIPVD 541
            +  D   L +DE N +YE+KASAWYQV+YHP WV +SLEL+         MLSFAWI  D
Sbjct: 1106 MEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLADAVSNTVMLSFAWIAAD 1165

Query: 542  YLVR 553
            YL R
Sbjct: 1166 YLAR 1169