BLASTX nr result
ID: Akebia22_contig00023066
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00023066
(621 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu... 293 3e-77
ref|XP_007011706.1| Pentatricopeptide repeat-containing protein,... 288 9e-76
ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi... 288 9e-76
ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containi... 283 3e-74
ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [A... 283 4e-74
ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containi... 281 8e-74
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 273 3e-71
ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containi... 273 3e-71
ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containi... 273 4e-71
ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi... 271 9e-71
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,... 270 3e-70
gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis] 268 7e-70
ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containi... 266 4e-69
ref|XP_007136936.1| hypothetical protein PHAVU_009G086500g [Phas... 263 3e-68
ref|XP_004501390.1| PREDICTED: pentatricopeptide repeat-containi... 250 3e-64
ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arab... 249 5e-64
ref|XP_006412544.1| hypothetical protein EUTSA_v10024264mg [Eutr... 246 5e-63
ref|XP_006282792.1| hypothetical protein CARUB_v10006400mg [Caps... 245 7e-63
ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thali... 245 7e-63
ref|XP_003603286.1| Pentatricopeptide repeat-containing protein ... 243 3e-62
>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
gi|550337245|gb|EEE92232.2| hypothetical protein
POPTR_0006s28060g [Populus trichocarpa]
Length = 1115
Score = 293 bits (750), Expect = 3e-77
Identities = 148/208 (71%), Positives = 176/208 (84%), Gaps = 1/208 (0%)
Frame = +1
Query: 1 GFVMKSSFER-VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCN 177
GF +KS E VV GK + G SSDEV+ L SI+DPI AL +F+SV PN+VHTTE+CN
Sbjct: 69 GFALKSQNEELVVNGKPRKGSSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCN 128
Query: 178 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 357
+MLE+LR RRVE+MA VFDLMQ+ II+RN++TYLIIFK L + GG+RQAP ALE MR A
Sbjct: 129 HMLEILRVHRRVEDMAFVFDLMQRHIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREA 188
Query: 358 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETV 537
GFVLNA+SYNGLIH LLQSGF +A+EVYRRMVSEG+KPSLKT+SALMVASGK R+ +TV
Sbjct: 189 GFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTV 248
Query: 538 MGLLEEMQSLGLRPNVYTFTICIRVLGR 621
MGLLEEM+S+GLRPN+YT+TICIRVLGR
Sbjct: 249 MGLLEEMESMGLRPNIYTYTICIRVLGR 276
Score = 67.4 bits (163), Expect = 3e-09
Identities = 40/133 (30%), Positives = 74/133 (55%)
Frame = +1
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
V+ F M K+ I+ ++++Y I+ L + G + A E +++AG + +YN
Sbjct: 946 VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
+I+ L +S +A+ ++ M + GI P L TY++L++ G + E + EE+Q +G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065
Query: 571 LRPNVYTFTICIR 609
L+PNV+T+ IR
Sbjct: 1066 LKPNVFTYNALIR 1078
Score = 57.8 bits (138), Expect = 3e-06
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Frame = +1
Query: 22 FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 198
F+R+VK + L S ++ + I ++ AL +F+ + +Q + + N M+ L
Sbjct: 953 FKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL-KQAGLDPDLVAYNLMINGLG 1011
Query: 199 GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 378
+R EE +F MQ + I ++ TY + L + G I +A E ++ G N F
Sbjct: 1012 RSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVF 1071
Query: 379 SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 498
+YN LI SG A +Y++M+ G P+ T++ L
Sbjct: 1072 TYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 57.4 bits (137), Expect = 3e-06
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Frame = +1
Query: 103 PIEALSFFQSVARQ---PNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNME 273
P +AL F+ + + PNIV +CN L L R+ E +F+ ++ + +
Sbjct: 455 PGKALETFEKMKARGIAPNIV----ACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510
Query: 274 TYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRM 453
TY ++ K G + +A L M + + N LI L ++G +A +++ RM
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM 570
Query: 454 VSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVL 615
+ P++ TY+ L+ GK + + L E M G PN TF + L
Sbjct: 571 EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL 624
Score = 55.8 bits (133), Expect = 1e-05
Identities = 44/198 (22%), Positives = 88/198 (44%)
Frame = +1
Query: 25 ERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQ 204
E + +G N ++ + VI L +A+ + ++ + T + +++ L
Sbjct: 850 EMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLV-SGDFSPTPCTFGPLIDGLLKS 908
Query: 205 RRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSY 384
R+++ +FD M + N Y I+ G G + A + M + G + SY
Sbjct: 909 GRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSY 968
Query: 385 NGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQS 564
L+ +L +G A+ + ++ G+ P L Y+ ++ G+ + E + L EMQ+
Sbjct: 969 TILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQN 1028
Query: 565 LGLRPNVYTFTICIRVLG 618
G+ P++YT+ I LG
Sbjct: 1029 RGIVPDLYTYNSLILNLG 1046
>ref|XP_007011706.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508782069|gb|EOY29325.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 1112
Score = 288 bits (737), Expect = 9e-76
Identities = 146/207 (70%), Positives = 172/207 (83%), Gaps = 1/207 (0%)
Frame = +1
Query: 4 FVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNY 180
+VMK+S + VV GK KN LSS+EV+ LKS TD ALS+F+SVA PN+VHTTE+CN+
Sbjct: 67 YVMKNSCQMVVANGKCKNSLSSEEVLRVLKSFTDTKSALSYFKSVAELPNVVHTTETCNH 126
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
MLE+LR R V M+ VF+ MQKQIIKR++ TYL +FKGL + GG+RQAP LE MR AG
Sbjct: 127 MLEVLRAHRMVGAMSFVFEFMQKQIIKRDLNTYLTVFKGLDIRGGLRQAPFGLERMRNAG 186
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
FVLNA+SYNGLIHLLLQSGF +A+EVYRRMVSEG+KPSLKTYSALMVASGK RD TVM
Sbjct: 187 FVLNAYSYNGLIHLLLQSGFSREALEVYRRMVSEGLKPSLKTYSALMVASGKRRDIGTVM 246
Query: 541 GLLEEMQSLGLRPNVYTFTICIRVLGR 621
LLEEM++LGL+PN+YTFTICIRVLGR
Sbjct: 247 DLLEEMETLGLKPNIYTFTICIRVLGR 273
Score = 70.9 bits (172), Expect = 3e-10
Identities = 43/133 (32%), Positives = 72/133 (54%)
Frame = +1
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
V+ +F M K+ I+ ++++Y I+ L + G + A E ++ G + SYN
Sbjct: 943 VDAACELFKRMVKEGIRPDLKSYTILVDCLCLVGRVDDAMHYFEELKLTGLDPDLVSYNL 1002
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
+I+ L +SG +A+ ++ M S GI P L TY++L++ G + E EE+Q +G
Sbjct: 1003 MINGLGRSGRVEEALSLFDEMWSRGISPDLYTYNSLILNLGTVGMVEQAGKFYEELQLMG 1062
Query: 571 LRPNVYTFTICIR 609
L PNVYT+ IR
Sbjct: 1063 LEPNVYTYNALIR 1075
Score = 59.7 bits (143), Expect = 7e-07
Identities = 37/116 (31%), Positives = 60/116 (51%)
Frame = +1
Query: 274 TYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRM 453
TY + GL G + +A E M G N YN L++ ++G A E+++RM
Sbjct: 894 TYGPLIDGLLKLGRLEEAKQLFEEMVDYGCKANCAIYNILMNGYGKTGDVDAACELFKRM 953
Query: 454 VSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
V EGI+P LK+Y+ L+ + + M EE++ GL P++ ++ + I LGR
Sbjct: 954 VKEGIRPDLKSYTILVDCLCLVGRVDDAMHYFEELKLTGLDPDLVSYNLMINGLGR 1009
Score = 56.6 bits (135), Expect = 6e-06
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Frame = +1
Query: 172 CNY--MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALEN 345
C Y +++ L R+EE +F+ M K N Y I+ G G + A +
Sbjct: 893 CTYGPLIDGLLKLGRLEEAKQLFEEMVDYGCKANCAIYNILMNGYGKTGDVDAACELFKR 952
Query: 346 MRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRD 525
M + G + SY L+ L G AM + + G+ P L +Y+ ++ G+
Sbjct: 953 MVKEGIRPDLKSYTILVDCLCLVGRVDDAMHYFEELKLTGLDPDLVSYNLMINGLGRSGR 1012
Query: 526 AETVMGLLEEMQSLGLRPNVYTFTICIRVLG 618
E + L +EM S G+ P++YT+ I LG
Sbjct: 1013 VEEALSLFDEMWSRGISPDLYTYNSLILNLG 1043
>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product
[Vitis vinifera]
Length = 1113
Score = 288 bits (737), Expect = 9e-76
Identities = 145/208 (69%), Positives = 177/208 (85%), Gaps = 1/208 (0%)
Frame = +1
Query: 1 GFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCN 177
GFV++SSF+ VV K K ++ +SS+EV LKSI+DP +A SFF SVA P ++HTTE+CN
Sbjct: 67 GFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCN 126
Query: 178 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 357
Y+LE+LR RRVE+M VVF+LMQKQIIKR++ TYL IFK L + GG+R+AP+ALE MR+
Sbjct: 127 YVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKV 186
Query: 358 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETV 537
GFVLN +SY GLIHLLL+SGF +A++VYRRMVSEGIKPSLKTYSALMVA GK RD ETV
Sbjct: 187 GFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETV 246
Query: 538 MGLLEEMQSLGLRPNVYTFTICIRVLGR 621
MGLL+EM+SLGLRPN+YTFTICIR+LGR
Sbjct: 247 MGLLQEMESLGLRPNIYTFTICIRILGR 274
Score = 61.6 bits (148), Expect = 2e-07
Identities = 43/145 (29%), Positives = 74/145 (51%)
Frame = +1
Query: 175 NYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRR 354
N ++ Q VE +F M K+ I+ ++++Y I+ L + G + A E ++
Sbjct: 932 NILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991
Query: 355 AGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAET 534
+G + YN +I+ L +S +A+ ++ M + GI P L TY+AL++ G E
Sbjct: 992 SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051
Query: 535 VMGLLEEMQSLGLRPNVYTFTICIR 609
+ EE+Q GL PNV+T+ IR
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALIR 1076
Score = 60.5 bits (145), Expect = 4e-07
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Frame = +1
Query: 22 FERVVKGKTKNGLSSDEV-IETLKSITDPIEALSFFQSV---ARQPNIVHTTESCNYMLE 189
F R+VK + L S + ++ L + +AL +F+ + P++V N M+
Sbjct: 951 FRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLV----CYNLMIN 1006
Query: 190 LLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVL 369
L +RVEE +FD M+ + I ++ TY + L + G + +A E ++ G
Sbjct: 1007 GLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEP 1066
Query: 370 NAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 498
N F+YN LI SG +A VY++M+ G +P+ T++ L
Sbjct: 1067 NVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 58.9 bits (141), Expect = 1e-06
Identities = 37/116 (31%), Positives = 59/116 (50%)
Frame = +1
Query: 274 TYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRM 453
TY + GL G + +A E M G + N YN L++ + G A E++RRM
Sbjct: 895 TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
Query: 454 VSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
V EGI+P LK+YS ++ + + + EE++ GL P++ + + I LGR
Sbjct: 955 VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGR 1010
Score = 56.6 bits (135), Expect = 6e-06
Identities = 38/172 (22%), Positives = 77/172 (44%)
Frame = +1
Query: 106 IEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLI 285
++A+ F S + + +++ L +V+E D+M+KQ + N+ TY
Sbjct: 348 LDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNT 407
Query: 286 IFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEG 465
+ GL + +A +M G A++Y I +SG G+A++ + +M + G
Sbjct: 408 LICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNG 467
Query: 466 IKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
I P++ +A + + + E ++ GL P+ T+ I +R G+
Sbjct: 468 IVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGK 519
>ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Solanum tuberosum]
Length = 1080
Score = 283 bits (724), Expect = 3e-74
Identities = 141/207 (68%), Positives = 174/207 (84%), Gaps = 1/207 (0%)
Frame = +1
Query: 4 FVMKSSFERV-VKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNY 180
FVMK S + V V GK +NG+S++ ++ L+SI++P EAL+ F+SVA P +VHTTE+CNY
Sbjct: 36 FVMKCSNDVVLVNGKPRNGISAEGLLRNLRSISEPTEALALFKSVAEMPRVVHTTETCNY 95
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
MLE LR R+ +MAVVFDLMQKQII R+++TYLIIFKGL + GGIR+AP ALE M++AG
Sbjct: 96 MLEYLRVLERINDMAVVFDLMQKQIIYRSLDTYLIIFKGLHIRGGIREAPFALERMKKAG 155
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
FVLNA+SYNGLIHL+LQ+GF +A++VYRRM+SE +KPSLKTYSALMVA GK RD ETVM
Sbjct: 156 FVLNAYSYNGLIHLILQAGFWQEALKVYRRMISEKLKPSLKTYSALMVACGKRRDTETVM 215
Query: 541 GLLEEMQSLGLRPNVYTFTICIRVLGR 621
LL EM+ LGLRPN+YTFTICIRVLGR
Sbjct: 216 RLLSEMEGLGLRPNIYTFTICIRVLGR 242
Score = 67.4 bits (163), Expect = 3e-09
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Frame = +1
Query: 22 FERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVAR---QPNIVHTTESCNYMLEL 192
++ V G T + +I+ L + + +A FF+ +A +PN S Y + L
Sbjct: 851 YDLVSLGFTPTPCTYGPLIDGLLKVKNFDKAKDFFEEMAEYGCRPN------SAIYNI-L 903
Query: 193 LRGQRRVEEMAVVFDL---MQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGF 363
+ G + ++ DL M K+ ++ +++TY I+ L + A E ++ AG
Sbjct: 904 INGFGKAGDLKAACDLFNRMNKEGVRPDLKTYTILVDCLCSARKVDDALHYFEELKSAGL 963
Query: 364 VLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMG 543
+ SYN +I+ L +SG +A+ + M S GI P+L TY+ L+ G + E
Sbjct: 964 DPDLISYNLMINGLGKSGKMKEALHLLDEMKSRGITPNLYTYNTLIFNLGIVGMLEEAGR 1023
Query: 544 LLEEMQSLGLRPNVYTFTICIR 609
+ EE+Q GL P+V+T+ IR
Sbjct: 1024 MYEELQQFGLEPDVFTYNALIR 1045
Score = 58.5 bits (140), Expect = 2e-06
Identities = 36/138 (26%), Positives = 69/138 (50%)
Frame = +1
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
+++ L R+V++ F+ ++ + ++ +Y ++ GL G +++A L+ M+ G
Sbjct: 938 LVDCLCSARKVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRG 997
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
N ++YN LI L G +A +Y + G++P + TY+AL+ K D +
Sbjct: 998 ITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQFGLEPDVFTYNALIRGYSKSGDPDGAY 1057
Query: 541 GLLEEMQSLGLRPNVYTF 594
+ E+M G PN TF
Sbjct: 1058 AIYEKMMVGGCSPNSGTF 1075
>ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [Amborella trichopoda]
gi|548847948|gb|ERN07051.1| hypothetical protein
AMTR_s00019p00039970 [Amborella trichopoda]
Length = 1123
Score = 283 bits (723), Expect = 4e-74
Identities = 140/207 (67%), Positives = 173/207 (83%)
Frame = +1
Query: 1 GFVMKSSFERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNY 180
G + S E +K + + GL+SD VIE L+S +DPIEAL+FF+S+A+QP I+HTTE+CNY
Sbjct: 79 GIDLSSYNEAKIKRRIRKGLNSDGVIEVLRSYSDPIEALAFFKSIAQQPKIIHTTETCNY 138
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
ML++LR +V EM++VFDLMQKQIIKR+ ETY+ IF GL ++GGI++AP+ALE + AG
Sbjct: 139 MLDILRINGKVTEMSMVFDLMQKQIIKRSQETYVTIFNGLDIFGGIKRAPVALERLSHAG 198
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
FVLNAFSYNGLIHLLLQSGF+ +AMEVYRRMVSE IKPSLKTYSALMVA GK +D TVM
Sbjct: 199 FVLNAFSYNGLIHLLLQSGFQREAMEVYRRMVSENIKPSLKTYSALMVAFGKRKDINTVM 258
Query: 541 GLLEEMQSLGLRPNVYTFTICIRVLGR 621
LL EM++LGLRPNVYT+TICIR+ GR
Sbjct: 259 YLLHEMEALGLRPNVYTYTICIRIFGR 285
Score = 67.8 bits (164), Expect = 3e-09
Identities = 46/157 (29%), Positives = 74/157 (47%)
Frame = +1
Query: 151 IVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAP 330
I+ +T + N +++ L E +F+ M+K NM+TY ++ L G I +A
Sbjct: 794 ILPSTHAYNILIDGLLKASCFEMAWGLFEKMKKVSSTPNMQTYNLLLDALGKSGKIEEAR 853
Query: 331 LALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVAS 510
LE M G N +YN ++ L++S QA+E Y ++S PS +TY L+
Sbjct: 854 KLLEEMHIKGIKGNTITYNIMLLGLVRSNKLDQAIEFYYELLSREFSPSPRTYGPLIDGL 913
Query: 511 GKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
K + L EEM+ G +PN + I I G+
Sbjct: 914 SKAGRVDEAKELFEEMREYGCKPNRAVYNILINGFGK 950
Score = 67.4 bits (163), Expect = 3e-09
Identities = 40/133 (30%), Positives = 73/133 (54%)
Frame = +1
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
+E F M K+ I+ +++TY I+ L + G + A E ++ +G + YN
Sbjct: 954 LENACEFFKRMLKEGIQPDLKTYTILVDCLCMVGRVDDALQYFEALKISGHEPDLVFYNL 1013
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
+I+ L + G +A+ +++ M S+G+ P L +Y+AL++ G++ E + EE+Q G
Sbjct: 1014 VINGLGKDGRLEEALSLFKEMQSKGLLPDLYSYNALILHLGRLGRVEEAGAMYEELQRKG 1073
Query: 571 LRPNVYTFTICIR 609
L PNV+T+ IR
Sbjct: 1074 LEPNVFTYNALIR 1086
Score = 60.8 bits (146), Expect = 3e-07
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 35/182 (19%)
Frame = +1
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
+L L+R + + + ++L+ ++ + TY + GL G + +A E MR G
Sbjct: 875 LLGLVRSNKLDQAIEFYYELLSREF-SPSPRTYGPLIDGLSKAGRVDEAKELFEEMREYG 933
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL---MVASGKIRDA- 528
N YN LI+ + G A E ++RM+ EGI+P LKTY+ L + G++ DA
Sbjct: 934 CKPNRAVYNILINGFGKVGDLENACEFFKRMLKEGIQPDLKTYTILVDCLCMVGRVDDAL 993
Query: 529 -------------------------------ETVMGLLEEMQSLGLRPNVYTFTICIRVL 615
E + L +EMQS GL P++Y++ I L
Sbjct: 994 QYFEALKISGHEPDLVFYNLVINGLGKDGRLEEALSLFKEMQSKGLLPDLYSYNALILHL 1053
Query: 616 GR 621
GR
Sbjct: 1054 GR 1055
>ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Solanum lycopersicum]
Length = 1131
Score = 281 bits (720), Expect = 8e-74
Identities = 140/207 (67%), Positives = 173/207 (83%), Gaps = 1/207 (0%)
Frame = +1
Query: 4 FVMKSSFERV-VKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNY 180
F MK S + V V GK +NG+S++ V+ L+SI++P EAL+ F+SVA P +VHTT++CNY
Sbjct: 87 FFMKCSSDVVLVNGKPRNGISAEGVLRNLRSISEPTEALALFKSVAEMPRVVHTTKTCNY 146
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
MLE LR R+ +MAVVFDLMQKQII R+++TYLIIFKGL + GGIR+AP ALE M++AG
Sbjct: 147 MLEFLRVLERINDMAVVFDLMQKQIIYRSLDTYLIIFKGLHIRGGIREAPFALERMKKAG 206
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
FVLNA+SYNGLIHL+LQ+GF +A++VYRRM+SE +KPSLKTYSALMVA GK RD ETVM
Sbjct: 207 FVLNAYSYNGLIHLILQAGFWQEALKVYRRMISEKLKPSLKTYSALMVACGKRRDTETVM 266
Query: 541 GLLEEMQSLGLRPNVYTFTICIRVLGR 621
LL EM+ LGLRPN+YTFTICIRVLGR
Sbjct: 267 RLLSEMEGLGLRPNIYTFTICIRVLGR 293
Score = 67.0 bits (162), Expect = 4e-09
Identities = 42/127 (33%), Positives = 69/127 (54%)
Frame = +1
Query: 229 VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 408
+F+ M K+ I+ +++TY I+ L + A E ++ AG + SYN +I+ L
Sbjct: 970 LFNRMNKEGIRPDLKTYTILVDCLCSARKVDDALHYFEELKSAGLDPDLISYNLMINGLG 1029
Query: 409 QSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVY 588
+SG +A+ + M S GI P+L TY+ L+ G + E + EE+Q LGL P+V+
Sbjct: 1030 KSGKMKEALHLLDEMKSRGITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQLGLEPDVF 1089
Query: 589 TFTICIR 609
T+ IR
Sbjct: 1090 TYNALIR 1096
Score = 58.5 bits (140), Expect = 2e-06
Identities = 36/138 (26%), Positives = 69/138 (50%)
Frame = +1
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
+++ L R+V++ F+ ++ + ++ +Y ++ GL G +++A L+ M+ G
Sbjct: 989 LVDCLCSARKVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRG 1048
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
N ++YN LI L G +A +Y + G++P + TY+AL+ K D +
Sbjct: 1049 ITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQLGLEPDVFTYNALIRGYSKSGDPDGAY 1108
Query: 541 GLLEEMQSLGLRPNVYTF 594
+ E+M G PN TF
Sbjct: 1109 AIYEKMMVGGCSPNSGTF 1126
>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 273 bits (698), Expect = 3e-71
Identities = 135/197 (68%), Positives = 165/197 (83%)
Frame = +1
Query: 31 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRR 210
VVKGKT+ +S DEV+ LKS+TDPI ALS+F S++ P ++HTTE+CN+MLE LR +
Sbjct: 78 VVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDK 137
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
VE+MA VF+ MQK+II+R+++TYL IFK L + GG+RQ L MR+AGFVLNA+SYNG
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
LIHLL+QSGF G+A+EVYRRMVSEG+KPSLKTYSALMVA GK RD+E VM LL+EM+ LG
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257
Query: 571 LRPNVYTFTICIRVLGR 621
LRPNVYTFTICIRVLGR
Sbjct: 258 LRPNVYTFTICIRVLGR 274
Score = 66.2 bits (160), Expect = 7e-09
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Frame = +1
Query: 10 MKSSFERVVKGKTKNGLSSDEVI--ETLKSITD--PIEALSFFQSVARQPNIVHTTESCN 177
++++ E VK K NG D+VI L D ++ F S + +
Sbjct: 313 LENAKELFVKMKA-NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371
Query: 178 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 357
++++L R +E FD+M+KQ I N+ TY + GL G I A L+ M
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431
Query: 358 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVA---SGKIRDA 528
G A++Y I +SG G+A+E + +M ++GI P++ +A + + G++R+A
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 529 ETVMGLLEEMQSLGLRPNVYTFTICIR 609
+T+ L E GL P+ T+ + ++
Sbjct: 492 KTMFNGLREN---GLAPDSVTYNMMMK 515
Score = 62.4 bits (150), Expect = 1e-07
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Frame = +1
Query: 169 SCNYMLELLRGQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLAL 339
+C L+ G ++ + L ++ + I+ ++++Y I+ L + G + +A
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986
Query: 340 ENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKI 519
++ G + +YN +I+ L +S +A+ +Y M + GI P L TY++LM+ G
Sbjct: 987 NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046
Query: 520 RDAETVMGLLEEMQSLGLRPNVYTFTICIR 609
E + EE+Q GL P+V+T+ IR
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
>ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 273 bits (698), Expect = 3e-71
Identities = 135/197 (68%), Positives = 165/197 (83%)
Frame = +1
Query: 31 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRR 210
VVKGKT+ +S DEV+ LKS+TDPI ALS+F S++ P ++HTTE+CN+MLE LR +
Sbjct: 78 VVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDK 137
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
VE+MA VF+ MQK+II+R+++TYL IFK L + GG+RQ L MR+AGFVLNA+SYNG
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
LIHLL+QSGF G+A+EVYRRMVSEG+KPSLKTYSALMVA GK RD+E VM LL+EM+ LG
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257
Query: 571 LRPNVYTFTICIRVLGR 621
LRPNVYTFTICIRVLGR
Sbjct: 258 LRPNVYTFTICIRVLGR 274
Score = 67.4 bits (163), Expect = 3e-09
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Frame = +1
Query: 10 MKSSFERVVKGKTKNGLSSDEVI--ETLKSITD--PIEALSFFQSVARQPNIVHTTESCN 177
++++ E VK K NG D+VI L D ++ F S + +
Sbjct: 313 LENAKELFVKMKA-NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371
Query: 178 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 357
++++L R +E FD+M+KQ I N+ TY + GL G I A L M
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV 431
Query: 358 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVA---SGKIRDA 528
G A++YN I +SG G+A+E + +M ++GI P++ +A + + G++R+A
Sbjct: 432 GVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 529 ETVMGLLEEMQSLGLRPNVYTFTICIR 609
+T+ L E GL P+ T+ + ++
Sbjct: 492 KTMFNGLREN---GLAPDSVTYNMMMK 515
Score = 62.4 bits (150), Expect = 1e-07
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Frame = +1
Query: 169 SCNYMLELLRGQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLAL 339
+C L+ G ++ + L ++ + I+ ++++Y I+ L + G + +A
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986
Query: 340 ENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKI 519
++ G + +YN +I+ L +S +A+ +Y M + GI P L TY++LM+ G
Sbjct: 987 NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046
Query: 520 RDAETVMGLLEEMQSLGLRPNVYTFTICIR 609
E + EE+Q GL P+V+T+ IR
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
>ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Citrus sinensis]
Length = 1107
Score = 273 bits (697), Expect = 4e-71
Identities = 141/208 (67%), Positives = 169/208 (81%), Gaps = 1/208 (0%)
Frame = +1
Query: 1 GFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCN 177
G+VMKSS E VV KGK +NGL+S+EVI L+S +D S+F+SVA P +VHTTE+CN
Sbjct: 61 GYVMKSSNEVVVVKGKPRNGLTSEEVIRVLRSFSDLDSTYSYFKSVAELPYVVHTTETCN 120
Query: 178 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 357
YMLE+LR RV +M VVFDLMQKQII R++ TYL IFK L + GG+R+A ALE MR A
Sbjct: 121 YMLEVLRVYGRVTDMVVVFDLMQKQIINRDLSTYLTIFKALSLKGGLRRASFALEKMRAA 180
Query: 358 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETV 537
GFVLNA+SYNG IH +LQSGF +A+ VY+R+VSEGIKPSLKTYSALMVA+GK R+ +TV
Sbjct: 181 GFVLNAYSYNGFIHFILQSGFCREALAVYKRVVSEGIKPSLKTYSALMVAAGKRRNIKTV 240
Query: 538 MGLLEEMQSLGLRPNVYTFTICIRVLGR 621
M LLEEM+ LGLRPNVYTFTICIR+LGR
Sbjct: 241 MNLLEEMERLGLRPNVYTFTICIRILGR 268
Score = 69.7 bits (169), Expect = 7e-10
Identities = 42/136 (30%), Positives = 72/136 (52%)
Frame = +1
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
VE +F M K I+ ++++Y ++ L + G + A E ++ G + SYN
Sbjct: 938 VETACELFKQMIKGGIRPDLKSYSVLVDCLCMVGRVDDALHYFEELKLNGLDADTISYNF 997
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
+I+ L +SG +A+ ++ M GI P L TY++L++ G+ E L E++Q +G
Sbjct: 998 MINGLGRSGRIEEALSLFDEMKKRGISPDLYTYNSLILNLGRAGMVEEARKLYEQLQEMG 1057
Query: 571 LRPNVYTFTICIRVLG 618
L PNV+T+ IR G
Sbjct: 1058 LEPNVFTYNALIRGYG 1073
Score = 63.2 bits (152), Expect = 6e-08
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Frame = +1
Query: 175 NYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRR 354
N +L+ RVEE+ +++ M + K N ++ I+ GL I +A N+
Sbjct: 821 NLLLDGYGKSGRVEELLKLYEEMSFRGCKPNTISHNIVISGLVKSNSIDKAMDLFYNLVS 880
Query: 355 AGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAET 534
GF +Y LI L +SG +A +++ M+ G KP+ Y+ L+ GK D ET
Sbjct: 881 GGFSPTPCTYGPLIDGLSKSGRLEEAKKLFEEMLDYGCKPNCVIYNILINGFGKTGDVET 940
Query: 535 VMGLLEEMQSLGLRPNVYTFTI---CIRVLGR 621
L ++M G+RP++ ++++ C+ ++GR
Sbjct: 941 ACELFKQMIKGGIRPDLKSYSVLVDCLCMVGR 972
Score = 61.6 bits (148), Expect = 2e-07
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Frame = +1
Query: 22 FERVVKGKTKNGLSSDEV-IETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 198
F++++KG + L S V ++ L + +AL +F+ + + + T S N+M+ L
Sbjct: 945 FKQMIKGGIRPDLKSYSVLVDCLCMVGRVDDALHYFEEL-KLNGLDADTISYNFMINGLG 1003
Query: 199 GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 378
R+EE +FD M+K+ I ++ TY + L G + +A E ++ G N F
Sbjct: 1004 RSGRIEEALSLFDEMKKRGISPDLYTYNSLILNLGRAGMVEEARKLYEQLQEMGLEPNVF 1063
Query: 379 SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 498
+YN LI SG A VY +M+ G P+ T++ L
Sbjct: 1064 TYNALIRGYGTSGNPDSAYAVYEKMMVGGCSPNPGTFAQL 1103
Score = 60.5 bits (145), Expect = 4e-07
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 5/195 (2%)
Frame = +1
Query: 52 NGLSSDE--VIETLKSITDPIEALS---FFQSVARQPNIVHTTESCNYMLELLRGQRRVE 216
NG+ D+ V+ +K +AL+ F + T E NY++ L E
Sbjct: 740 NGICRDDSVVVPIIKLFCRQKKALAAKDLFVKFTENLGVTSTLEMYNYLIHGLLEVHATE 799
Query: 217 EMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLI 396
+F M+ ++ TY ++ G G + + E M G N S+N +I
Sbjct: 800 MGLDLFTTMKNAGCAPDISTYNLLLDGYGKSGRVEELLKLYEEMSFRGCKPNTISHNIVI 859
Query: 397 HLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLR 576
L++S +AM+++ +VS G P+ TY L+ K E L EEM G +
Sbjct: 860 SGLVKSNSIDKAMDLFYNLVSGGFSPTPCTYGPLIDGLSKSGRLEEAKKLFEEMLDYGCK 919
Query: 577 PNVYTFTICIRVLGR 621
PN + I I G+
Sbjct: 920 PNCVIYNILINGFGK 934
Score = 57.8 bits (138), Expect = 3e-06
Identities = 46/172 (26%), Positives = 74/172 (43%)
Frame = +1
Query: 100 DPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETY 279
DP +AL F+ + + IV SCN L L R+ E +F+ ++ + TY
Sbjct: 446 DPGKALETFEKMKIR-GIVPNVVSCNASLYSLAETGRIGEAKTIFNGLKNSGFAPDSVTY 504
Query: 280 LIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVS 459
++ K G + +A L M G + N LI L ++ +A E++ RM
Sbjct: 505 NMMMKCYSKVGQVDEAVTLLSEMVENGCEPDVIVMNTLIDTLYKADRVDEAWEMFCRMKD 564
Query: 460 EGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVL 615
+ P++ TY+ L+ GK + + L E M G PN TF + L
Sbjct: 565 MKLAPTVVTYNTLLSGLGKEGQVQKAIELFEGMTDHGCFPNTVTFNTLLHCL 616
Score = 56.2 bits (134), Expect = 8e-06
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
Frame = +1
Query: 7 VMKSSFERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNY-- 180
++K E +G N +S + VI L +A+ F ++ + C Y
Sbjct: 836 LLKLYEEMSFRGCKPNTISHNIVISGLVKSNSIDKAMDLFYNLVSGG---FSPTPCTYGP 892
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
+++ L R+EE +F+ M K N Y I+ G G + A + M + G
Sbjct: 893 LIDGLSKSGRLEEAKKLFEEMLDYGCKPNCVIYNILINGFGKTGDVETACELFKQMIKGG 952
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
+ SY+ L+ L G A+ + + G+ +Y+ ++ G+ E +
Sbjct: 953 IRPDLKSYSVLVDCLCMVGRVDDALHYFEELKLNGLDADTISYNFMINGLGRSGRIEEAL 1012
Query: 541 GLLEEMQSLGLRPNVYTFTICIRVLGR 621
L +EM+ G+ P++YT+ I LGR
Sbjct: 1013 SLFDEMKKRGISPDLYTYNSLILNLGR 1039
>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 271 bits (694), Expect = 9e-71
Identities = 135/197 (68%), Positives = 164/197 (83%)
Frame = +1
Query: 31 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRR 210
VV GK+K+ +SS+EVI LKSI+DP ALS+F+ V++ PNIVHT E+CNYMLE LR R
Sbjct: 78 VVNGKSKSSVSSEEVIGALKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGR 137
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
VE+MA VFDLMQKQ+I RN TYL IFK L + GGIRQAP AL MR+AGFVLNA+SYNG
Sbjct: 138 VEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNG 197
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
LI+ LLQ GF +A++VY+RM+SEG+KPS+KTYSALMVA G+ RD T+M LLEEM++LG
Sbjct: 198 LIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLG 257
Query: 571 LRPNVYTFTICIRVLGR 621
LRPN+YT+TICIRVLGR
Sbjct: 258 LRPNIYTYTICIRVLGR 274
Score = 67.0 bits (162), Expect = 4e-09
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Frame = +1
Query: 190 LLRGQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
L+ G + + + DL ++ I I+ ++++Y I+ + L + G + A E ++ G
Sbjct: 934 LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
+ SYN +I+ L +S +A+ ++ M + GI P L TY+AL++ G +
Sbjct: 994 LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053
Query: 541 GLLEEMQSLGLRPNVYTFTICIR 609
+ EE+Q +GL PNV+T+ IR
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALIR 1076
Score = 63.5 bits (153), Expect = 5e-08
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = +1
Query: 199 GQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVL 369
G+RR + + DL+++ ++ N+ TY I + L G I A L+ M G
Sbjct: 238 GRRR--DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGP 295
Query: 370 NAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLL 549
+ +Y LI L +G +A E+Y +M + KP L TY LM G D ETV
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355
Query: 550 EEMQSLGLRPNVYTFTICIRVL 615
EM++ G P+V T+TI + L
Sbjct: 356 SEMEADGYAPDVVTYTILVEAL 377
Score = 57.0 bits (136), Expect = 4e-06
Identities = 39/176 (22%), Positives = 77/176 (43%)
Frame = +1
Query: 94 ITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNME 273
I D L + P++V T +++ L ++++ ++ M+ K ++
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYT----VLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333
Query: 274 TYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRM 453
TY+ + +G + M G+ + +Y L+ L +SG QA ++ M
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393
Query: 454 VSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
GI P+L TY+ L+ +R + + L M+SLG+ P Y++ + I G+
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGK 449
Score = 56.6 bits (135), Expect = 6e-06
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Frame = +1
Query: 22 FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 198
F+R++K + L S ++ +T ++ A+ +F+ + + + T S N M+ L
Sbjct: 951 FKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL-KLTGLDPDTVSYNLMINGLG 1009
Query: 199 GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 378
RR+EE +F M+ + I + TY + G + QA E ++ G N F
Sbjct: 1010 KSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVF 1069
Query: 379 SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 498
+YN LI +SG + +A V+++M+ G P+ T++ L
Sbjct: 1070 TYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1113
Score = 270 bits (689), Expect = 3e-70
Identities = 140/208 (67%), Positives = 165/208 (79%), Gaps = 1/208 (0%)
Frame = +1
Query: 1 GFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCN 177
G +KSS VV K K KN LSS EV+ L SI DP +A S+F SVA P +VHTTE+CN
Sbjct: 69 GVAVKSSHGLVVAKRKPKNALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCN 128
Query: 178 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 357
+MLE+LR RRV +M VVF+LMQ QIIKR++ TYLIIFKGL + GG+RQ P A MR A
Sbjct: 129 HMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREA 188
Query: 358 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETV 537
GF LNA+SYNGLIHLLLQSG +A+E+YRRMV EG+KPSLKT+SALMVA+GK RD ETV
Sbjct: 189 GFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETV 248
Query: 538 MGLLEEMQSLGLRPNVYTFTICIRVLGR 621
LLEEM+SLGL+PN+YT+TICIRVLGR
Sbjct: 249 KSLLEEMESLGLKPNIYTYTICIRVLGR 276
Score = 64.7 bits (156), Expect = 2e-08
Identities = 40/127 (31%), Positives = 69/127 (54%)
Frame = +1
Query: 229 VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 408
+F M ++ I+ ++++Y + L G + A E +++ G L++ +YN +I L
Sbjct: 952 LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLG 1011
Query: 409 QSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVY 588
+S +A+ +Y M S GI P L TY++L++ G E L EE+Q +GL PNV+
Sbjct: 1012 RSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVF 1071
Query: 589 TFTICIR 609
T+ IR
Sbjct: 1072 TYNALIR 1078
Score = 62.8 bits (151), Expect = 8e-08
Identities = 40/130 (30%), Positives = 66/130 (50%)
Frame = +1
Query: 109 EALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLII 288
+AL +F+ + +Q + + + N M++ L R+EE ++D MQ + I ++ TY +
Sbjct: 983 DALHYFEKL-KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041
Query: 289 FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGI 468
L V G + QA E ++ G N F+YN LI SG A VY+RM+ G
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101
Query: 469 KPSLKTYSAL 498
P+ T++ L
Sbjct: 1102 SPNTGTFAQL 1111
>gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]
Length = 1098
Score = 268 bits (686), Expect = 7e-70
Identities = 143/209 (68%), Positives = 165/209 (78%), Gaps = 2/209 (0%)
Frame = +1
Query: 1 GFVMK--SSFERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESC 174
GFVMK ER V + S++EV LKSI DP A S+F SVAR P +VHTT++C
Sbjct: 56 GFVMKIPDEGERTVLVR-----SAEEVARVLKSILDPNCAFSYFMSVARLPKVVHTTDTC 110
Query: 175 NYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRR 354
NYMLELLR RVE+MAVVFD MQKQ+I RN+ TYL IFKGL + GIRQAP+ALE M R
Sbjct: 111 NYMLELLRTNGRVEDMAVVFDFMQKQLINRNLNTYLTIFKGLYIRVGIRQAPIALEKMSR 170
Query: 355 AGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAET 534
AGFVLNA+SYNGLI+L+LQ+G +A+ VY+RMVSEG KPSLKTYSALMVA GK RD ET
Sbjct: 171 AGFVLNAYSYNGLIYLILQTGSFREALVVYKRMVSEGFKPSLKTYSALMVAFGKRRDTET 230
Query: 535 VMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
VMGLL+EM+ LGLRPN+YTFTICIRVLGR
Sbjct: 231 VMGLLQEMEDLGLRPNIYTFTICIRVLGR 259
Score = 64.7 bits (156), Expect = 2e-08
Identities = 42/133 (31%), Positives = 72/133 (54%)
Frame = +1
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
VE ++F M K+ I+ ++++Y I+ L + G I A E ++ +G ++ SYN
Sbjct: 929 VETACMLFKRMVKEGIRPDLKSYTILVDCLCLAGRIDDALHYFEELKLSGLNPDSVSYNL 988
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
+I+ L +S +A+ +Y M S I P L TY++L++ G E + EE+Q G
Sbjct: 989 MINALGRSRRVEEALSLYDEMRSRRITPDLYTYNSLILNLGIAGMVEQAGSMYEELQLRG 1048
Query: 571 LRPNVYTFTICIR 609
L P+V+T+ IR
Sbjct: 1049 LEPDVFTYNALIR 1061
Score = 64.3 bits (155), Expect = 3e-08
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Frame = +1
Query: 22 FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 198
F+R+VK + L S ++ + I+ AL +F+ + + + + S N M+ L
Sbjct: 936 FKRMVKEGIRPDLKSYTILVDCLCLAGRIDDALHYFEEL-KLSGLNPDSVSYNLMINALG 994
Query: 199 GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 378
RRVEE ++D M+ + I ++ TY + L + G + QA E ++ G + F
Sbjct: 995 RSRRVEEALSLYDEMRSRRITPDLYTYNSLILNLGIAGMVEQAGSMYEELQLRGLEPDVF 1054
Query: 379 SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 498
+YN LI SG A VY++M+ G P++ T++ L
Sbjct: 1055 TYNALIRAYSASGNPDHAYAVYKKMMIGGCSPNVSTFAQL 1094
Score = 63.2 bits (152), Expect = 6e-08
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 2/200 (1%)
Frame = +1
Query: 25 ERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNY--MLELLR 198
E + +G N ++ + VI +L + +A+ F+ + + C Y +++ L
Sbjct: 833 EMISRGCKPNTITYNIVISSLVKSDNVDKAIDFYYDLVSGD---FSPSPCTYGPLIDGLL 889
Query: 199 GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 378
RR EE F+ M K N + I+ G G + A + + M + G +
Sbjct: 890 KSRRQEEAMRFFEEMGDYGCKPNCAIFNILINGFGKAGDVETACMLFKRMVKEGIRPDLK 949
Query: 379 SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEM 558
SY L+ L +G A+ + + G+ P +Y+ ++ A G+ R E + L +EM
Sbjct: 950 SYTILVDCLCLAGRIDDALHYFEELKLSGLNPDSVSYNLMINALGRSRRVEEALSLYDEM 1009
Query: 559 QSLGLRPNVYTFTICIRVLG 618
+S + P++YT+ I LG
Sbjct: 1010 RSRRITPDLYTYNSLILNLG 1029
Score = 55.8 bits (133), Expect = 1e-05
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 10/217 (4%)
Frame = +1
Query: 1 GFVMKSSFERVVKGKTKNGLSSDEV----------IETLKSITDPIEALSFFQSVARQPN 150
G ++K+ +R + K L SD++ I L ++A F R
Sbjct: 711 GILVKAEADRAISFAEK--LVSDKICLDDSILLPLIRALCKGKKTVDANHLFAKFTRTFG 768
Query: 151 IVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAP 330
I T E+ N ++E L E+ +F+ M++ + TY ++ +G I +
Sbjct: 769 IKPTLETYNCLIEGLLRVHANEKAWDLFNEMKRVGCAPDDFTYNLLLAAHCKFGEITELF 828
Query: 331 LALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVAS 510
E M G N +YN +I L++S +A++ Y +VS PS TY L+
Sbjct: 829 GLYEEMISRGCKPNTITYNIVISSLVKSDNVDKAIDFYYDLVSGDFSPSPCTYGPLIDGL 888
Query: 511 GKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
K R E M EEM G +PN F I I G+
Sbjct: 889 LKSRRQEEAMRFFEEMGDYGCKPNCAIFNILINGFGK 925
>ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1089
Score = 266 bits (680), Expect = 4e-69
Identities = 133/208 (63%), Positives = 169/208 (81%), Gaps = 2/208 (0%)
Frame = +1
Query: 4 FVMKSSFERVVKG--KTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCN 177
FV+K ++VV K +N +SS+EV+ LKSI+DP A SFF+S+A P ++HTTE+CN
Sbjct: 43 FVIKRPHQQVVVNTKKPRNSVSSEEVVRVLKSISDPTSAFSFFKSIADLPTVLHTTETCN 102
Query: 178 YMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 357
YML+LL RRV +MA VFDLMQ+ II R+++TYL IFKGL + GGIR AP AL +R+
Sbjct: 103 YMLQLLGVHRRVGDMAFVFDLMQRHIINRSLDTYLTIFKGLNIRGGIRAAPYALPRLRKH 162
Query: 358 GFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETV 537
GFVLNAFSYNGLI++L+QSG+ +A++VY+ MVS+GI+PSLKTYSALMVA GK RD + V
Sbjct: 163 GFVLNAFSYNGLIYMLIQSGYCREALQVYQTMVSQGIRPSLKTYSALMVALGKRRDVQAV 222
Query: 538 MGLLEEMQSLGLRPNVYTFTICIRVLGR 621
MGLL+EM++LGLRPNVYTFTICIRVLGR
Sbjct: 223 MGLLKEMETLGLRPNVYTFTICIRVLGR 250
Score = 64.7 bits (156), Expect = 2e-08
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Frame = +1
Query: 22 FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 198
F+R++K + L S ++ ++ AL +F+ + RQ + + S N M+ L
Sbjct: 927 FKRMIKEGIRPDLKSFTILVDCYCQAGRVDDALHYFEEL-RQSGLDPDSVSYNLMINGLG 985
Query: 199 GQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 378
RR+EE V++D M+K+ I ++ TY + L + G + +A + + G + F
Sbjct: 986 RSRRMEEALVLYDEMRKRRITPDIFTYNSLILNLGLVGMVEEAGRIYKELLLTGLEPDVF 1045
Query: 379 SYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 498
+YN LI L SG A VY+ M+ G P++ TY+ L
Sbjct: 1046 TYNALIRLYSTSGNTDDAYAVYKNMMVGGCSPNVGTYAQL 1085
Score = 63.2 bits (152), Expect = 6e-08
Identities = 47/170 (27%), Positives = 76/170 (44%)
Frame = +1
Query: 106 IEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLI 285
IEA ++ PNIV +CN L L + R+ E ++D + + + TY +
Sbjct: 433 IEAYERMKTRGIVPNIV----ACNASLYGLAEEGRLHEAKHIYDELIYSGLSPDSVTYNM 488
Query: 286 IFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEG 465
+ K G I +A L M R G + N LI +L ++G +A +++ RM
Sbjct: 489 MMKCYSRVGQIDEAIKLLSEMERNGCEADVIIVNSLIDMLYKAGRVDEAWQMFYRMKEMK 548
Query: 466 IKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVL 615
+ P++ TY+ L+ A GK + + E M G PN TF + L
Sbjct: 549 LTPTVVTYNTLLAALGKEGQVGKAIAMFENMTEQGCPPNAITFNTLLNCL 598
Score = 58.2 bits (139), Expect = 2e-06
Identities = 44/166 (26%), Positives = 79/166 (47%)
Frame = +1
Query: 109 EALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLII 288
EAL +Q++ Q I + ++ + ++ L +R V+ + + M+ ++ N+ T+ I
Sbjct: 186 EALQVYQTMVSQ-GIRPSLKTYSALMVALGKRRDVQAVMGLLKEMETLGLRPNVYTFTIC 244
Query: 289 FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGI 468
+ L G I +A + M G + +Y LI L +G A +++ M + G
Sbjct: 245 IRVLGRAGKIDEAYQIFKRMDNEGCGPDVITYTVLIDALCNAGKLDNAKKLFANMKARGH 304
Query: 469 KPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 606
KP TY L+ +D +TV EM++ G P+V TFTI +
Sbjct: 305 KPDQVTYITLLDKFSDCKDLDTVREFWSEMKADGYAPDVVTFTILV 350
Score = 57.4 bits (137), Expect = 3e-06
Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 6/174 (3%)
Frame = +1
Query: 109 EALSFFQSVAR---QPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQI---IKRNM 270
EA+ FF+ +A +PN C L+ G +V ++ +L ++ I I+ ++
Sbjct: 887 EAMHFFEEMAEYGCKPN-------CAIFNILINGFSKVGDVETACELFKRMIKEGIRPDL 939
Query: 271 ETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRR 450
+++ I+ G + A E +R++G ++ SYN +I+ L +S +A+ +Y
Sbjct: 940 KSFTILVDCYCQAGRVDDALHYFEELRQSGLDPDSVSYNLMINGLGRSRRMEEALVLYDE 999
Query: 451 MVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRV 612
M I P + TY++L++ G + E + +E+ GL P+V+T+ IR+
Sbjct: 1000 MRKRRITPDIFTYNSLILNLGLVGMVEEAGRIYKELLLTGLEPDVFTYNALIRL 1053
>ref|XP_007136936.1| hypothetical protein PHAVU_009G086500g [Phaseolus vulgaris]
gi|561010023|gb|ESW08930.1| hypothetical protein
PHAVU_009G086500g [Phaseolus vulgaris]
Length = 1106
Score = 263 bits (672), Expect = 3e-68
Identities = 130/196 (66%), Positives = 159/196 (81%)
Frame = +1
Query: 34 VKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRV 213
V GK+K +SS+EVI LKSI DP AL +F+ V++ PN+VHT E+CNYMLELLR RV
Sbjct: 72 VNGKSKTRVSSEEVIGVLKSILDPNSALLYFKMVSQLPNLVHTPETCNYMLELLRAHGRV 131
Query: 214 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 393
E+M VFD MQ+Q+I RN TYL IFK L + GGIRQAP AL MR+AGFVLNA+SYNGL
Sbjct: 132 EDMVFVFDFMQEQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGL 191
Query: 394 IHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGL 573
IH LLQ GF +A++VY+RM+SEG+KPS+KTYSALMVA GK R+ T+M LLEEM++LGL
Sbjct: 192 IHFLLQPGFCKEALKVYKRMISEGMKPSMKTYSALMVALGKRRETGTIMDLLEEMKTLGL 251
Query: 574 RPNVYTFTICIRVLGR 621
+PN+YT+TICIRVLGR
Sbjct: 252 KPNIYTYTICIRVLGR 267
Score = 65.1 bits (157), Expect = 2e-08
Identities = 43/170 (25%), Positives = 86/170 (50%), Gaps = 3/170 (1%)
Frame = +1
Query: 109 EALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQI---IKRNMETY 279
EA++ F+ ++ H +C L+ G + + + DL ++ + I+ ++++Y
Sbjct: 904 EAMNIFEEMSDY----HCKPNCAIYNILINGFGKAGNVDIACDLFKRMVKEGIRPDLKSY 959
Query: 280 LIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVS 459
I+ + L + + A E ++ G + SYN +I+ L +S +A+ ++ M +
Sbjct: 960 TILVECLCMSDRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSHRFEEALSLFSEMKN 1019
Query: 460 EGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIR 609
GI P L TY++L++ G + + EE+Q +GL PNV+T+ IR
Sbjct: 1020 RGITPDLYTYNSLILHFGNAGMVDRAGKMFEELQLMGLEPNVFTYNALIR 1069
Score = 61.2 bits (147), Expect = 2e-07
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = +1
Query: 199 GQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVL 369
G+RR E + DL+++ +K N+ TY I + L G I A L+ M G
Sbjct: 231 GKRR--ETGTIMDLLEEMKTLGLKPNIYTYTICIRVLGRAGRIDDAYGILKTMDNEGCGP 288
Query: 370 NAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLL 549
+ +Y LI L +G +AME+Y +M + G KP TY LM G + E V
Sbjct: 289 DVVTYTVLIDALCVAGKLDKAMELYTKMRASGHKPDQVTYITLMGNFGNYGNLEMVKRFW 348
Query: 550 EEMQSLGLRPNVYTFTICIRVL 615
EM++ G P+V ++TI + L
Sbjct: 349 SEMEADGYAPDVVSYTIIVEAL 370
Score = 55.8 bits (133), Expect = 1e-05
Identities = 31/138 (22%), Positives = 64/138 (46%)
Frame = +1
Query: 208 RVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 387
++++ ++ M+ K + TY+ + +G + M G+ + SY
Sbjct: 305 KLDKAMELYTKMRASGHKPDQVTYITLMGNFGNYGNLEMVKRFWSEMEADGYAPDVVSYT 364
Query: 388 GLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSL 567
++ L +SG QA ++ M +GI P+L TY+ L+ +R + + L ++SL
Sbjct: 365 IIVEALCKSGKVDQAFDILDVMKVKGIFPNLHTYNTLISGLLNLRKLDEALELFNNLESL 424
Query: 568 GLRPNVYTFTICIRVLGR 621
G+ P Y++ + I G+
Sbjct: 425 GVEPTAYSYVLFIDYYGK 442
>ref|XP_004501390.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cicer arietinum]
Length = 1120
Score = 250 bits (638), Expect = 3e-64
Identities = 123/197 (62%), Positives = 155/197 (78%)
Frame = +1
Query: 31 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRR 210
VV GK K +SS+EV+ LKSI +P S+F+ V++ PN VH T++CNYMLE LR Q R
Sbjct: 86 VVNGKNKTRVSSEEVMSVLKSILEPSSVFSYFKLVSQLPNFVHNTDACNYMLEFLRDQGR 145
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
+E+M VF+LMQKQ+I RN+ TY+ IFK L + GGI AP AL MR+AGFVLNA+SYNG
Sbjct: 146 IEDMVYVFNLMQKQVIYRNLNTYMTIFKALSIKGGIGNAPSALGKMRQAGFVLNAYSYNG 205
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
LIHLLL GF +A++VY+RM+SEG+KPS+KTYSALMVA G+ RD +M LLEEM++LG
Sbjct: 206 LIHLLL-PGFYKEALKVYKRMISEGMKPSMKTYSALMVALGRRRDTRNIMNLLEEMKNLG 264
Query: 571 LRPNVYTFTICIRVLGR 621
LRPN+YT+TICIR LGR
Sbjct: 265 LRPNIYTYTICIRALGR 281
Score = 68.9 bits (167), Expect = 1e-09
Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Frame = +1
Query: 190 LLRGQRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
L+ G + E+ + DL +K + I+ ++++Y I+ + L + G + +A E ++ G
Sbjct: 941 LINGFGKAGEIDIALDLFKKMVKEGIRPDLKSYTILVECLCITGRVDEAFQYFEELKLTG 1000
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
+ SYN +I+ L +S +A+ ++ M + GI P L TY++L+ G + +
Sbjct: 1001 LDPDTVSYNFIINGLGKSRRLEEALSLFSEMKNRGISPDLYTYNSLIFHLGVTGKVDLAV 1060
Query: 541 GLLEEMQSLGLRPNVYTFTICIR 609
+ EE+Q +GL P+V+T+ IR
Sbjct: 1061 KMYEELQLVGLEPSVFTYNALIR 1083
Score = 57.0 bits (136), Expect = 4e-06
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Frame = +1
Query: 199 GQRR-VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNA 375
G+RR + + + M+ ++ N+ TY I + L G I A + M G +
Sbjct: 245 GRRRDTRNIMNLLEEMKNLGLRPNIYTYTICIRALGRAGRIDDAWGIFKQMGDEGCGPDV 304
Query: 376 FSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEE 555
+Y LI L +G +A E+Y +M + G P TY LM I D ETV +E
Sbjct: 305 VTYTVLIDALCAAGKLDKAGELYVKMRATGHSPDRVTYITLMDKYSNIGDLETVKRFWDE 364
Query: 556 MQSLGLRPNVYTFTICIRVL 615
M++ G P+V T+TI I L
Sbjct: 365 MEADGYAPDVVTYTILIEAL 384
Score = 57.0 bits (136), Expect = 4e-06
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 3/181 (1%)
Frame = +1
Query: 76 IETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQI 255
+ET+K D +EA + P++V T ++E L + + D+M +
Sbjct: 355 LETVKRFWDEMEADGY------APDVVTYT----ILIEALCKSGDFDRAFSMLDVMTMKE 404
Query: 256 IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAM 435
+ N+ TY + GL + +A ENM G AFSY I +SG G+A
Sbjct: 405 VFPNLHTYNTLICGLLKARRLDEALELFENMESLGVKPAAFSYVLFIDYYGKSGDPGKAF 464
Query: 436 EVYRRMVSEGIKPSLKTYSA---LMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICI 606
+ + M GI PS+ +A + +G+IR+AE V ++ + GL P+ T+ + I
Sbjct: 465 DTFETMKKRGIMPSIAACNASLYTLADTGRIREAEDV---FNDLHNCGLSPDSITYNMMI 521
Query: 607 R 609
+
Sbjct: 522 K 522
>ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata] gi|297315145|gb|EFH45568.1| hypothetical protein
ARALYDRAFT_491552 [Arabidopsis lyrata subsp. lyrata]
Length = 1114
Score = 249 bits (636), Expect = 5e-64
Identities = 127/197 (64%), Positives = 154/197 (78%)
Frame = +1
Query: 31 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRR 210
+++ +K LSS EV L S D + S+F+SVA N+VHTTE+CNYMLE LR +
Sbjct: 76 MIRKSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGK 135
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
+EEMA VFDLMQK+IIKR+ TYL IFK L V GG+RQAP AL MR GFVLNA+SYNG
Sbjct: 136 IEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNG 195
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
LIHLLL+S F +AMEVYRRM+ +G +PSL+TYS+LMV GK RD E+VMGLL+EM++LG
Sbjct: 196 LIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLG 255
Query: 571 LRPNVYTFTICIRVLGR 621
L+PNVYTFTICIRVLGR
Sbjct: 256 LKPNVYTFTICIRVLGR 272
Score = 61.2 bits (147), Expect = 2e-07
Identities = 39/136 (28%), Positives = 65/136 (47%)
Frame = +1
Query: 214 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 393
+ + + +DLM + TY + GL G + +A E M G N YN L
Sbjct: 875 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNIL 934
Query: 394 IHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGL 573
I+ ++G A +++RMV EG++P LKTYS L+ + + + E++ GL
Sbjct: 935 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 994
Query: 574 RPNVYTFTICIRVLGR 621
P+V + + I LG+
Sbjct: 995 NPDVVCYNLIINGLGK 1010
Score = 56.2 bits (134), Expect = 8e-06
Identities = 37/135 (27%), Positives = 67/135 (49%)
Frame = +1
Query: 181 MLELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 360
+L+ R ++ + + M+K ++ T+ I+ L G +A L+ MR G
Sbjct: 336 LLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQG 395
Query: 361 FVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVM 540
+ N +YN LI LL+ A+E++ M S G+KP+ TY + GK D+ + +
Sbjct: 396 ILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 455
Query: 541 GLLEEMQSLGLRPNV 585
E+M++ G+ PN+
Sbjct: 456 ETFEKMKTKGIAPNI 470
>ref|XP_006412544.1| hypothetical protein EUTSA_v10024264mg [Eutrema salsugineum]
gi|557113714|gb|ESQ53997.1| hypothetical protein
EUTSA_v10024264mg [Eutrema salsugineum]
Length = 1118
Score = 246 bits (627), Expect = 5e-63
Identities = 124/197 (62%), Positives = 154/197 (78%)
Frame = +1
Query: 31 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRR 210
++ +K+ SS EV + L S+ D A S+F+SVA N+VHTTE+CNYMLE LR +
Sbjct: 79 MINKTSKSNPSSGEVTKVLMSLPDTDSAFSYFKSVAANSNLVHTTETCNYMLEALRVDGK 138
Query: 211 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 390
+EEMA VFDLMQK+IIKR++ T+L +FK L V GG+RQAP AL MR +GF LNA+SYNG
Sbjct: 139 IEEMAYVFDLMQKRIIKRDINTFLTVFKCLSVKGGLRQAPYALRKMRESGFALNAYSYNG 198
Query: 391 LIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLG 570
LIHLLL+S F +AMEVYRRM+ EG +PSL+TYS+LMV GK RD E VM LL+EM++LG
Sbjct: 199 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIEAVMALLKEMETLG 258
Query: 571 LRPNVYTFTICIRVLGR 621
L+PNVYTFTICIRVLGR
Sbjct: 259 LKPNVYTFTICIRVLGR 275
Score = 59.7 bits (143), Expect = 7e-07
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +1
Query: 229 VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 408
+F M K+ ++ +++TY ++ L + G + + ++ +G + YN +I+ L
Sbjct: 954 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLDPDVVCYNLIINGLG 1013
Query: 409 QSGFRGQAMEVYRRMV-SEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNV 585
+S +A+E+Y M S GI P L TY++L++ G E + +E+Q GL PNV
Sbjct: 1014 KSQRLEEALELYNEMKNSRGITPDLYTYNSLILNMGIAGMVEGAGKIYDEIQRAGLEPNV 1073
Query: 586 YTFTICIR 609
+TF IR
Sbjct: 1074 FTFNALIR 1081
Score = 58.2 bits (139), Expect = 2e-06
Identities = 39/136 (28%), Positives = 64/136 (47%)
Frame = +1
Query: 214 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 393
E + + +DL+ TY + GL G + +A E M N YN L
Sbjct: 879 EALDLYYDLISDGDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYDCRPNCAIYNIL 938
Query: 394 IHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGL 573
I+ ++G A E+++RMV EG++P LKTYS L+ + + + E++ GL
Sbjct: 939 INGFGKAGEADAACELFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 998
Query: 574 RPNVYTFTICIRVLGR 621
P+V + + I LG+
Sbjct: 999 DPDVVCYNLIINGLGK 1014
>ref|XP_006282792.1| hypothetical protein CARUB_v10006400mg [Capsella rubella]
gi|482551497|gb|EOA15690.1| hypothetical protein
CARUB_v10006400mg [Capsella rubella]
Length = 1114
Score = 245 bits (626), Expect = 7e-63
Identities = 132/206 (64%), Positives = 157/206 (76%), Gaps = 2/206 (0%)
Frame = +1
Query: 10 MKSS-FERVVKGKT-KNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYM 183
MKSS F + GK+ K+ LSS EV LKS D S+F+SVA N+VH+TE+CNYM
Sbjct: 67 MKSSDFSASMIGKSLKSNLSSIEVTRVLKSFPDIDSKFSYFKSVADNSNLVHSTETCNYM 126
Query: 184 LELLRGQRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGF 363
LE LR +VEEM VFD MQK+IIKR+ TYL IFK L V GG+RQ+P AL MR GF
Sbjct: 127 LEALRVNGKVEEMVYVFDFMQKRIIKRDANTYLTIFKSLSVKGGLRQSPYALRKMREFGF 186
Query: 364 VLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMG 543
VLNA+SYNGLIHLLL+S F +AMEVY RM+ EG +PSL+TYS+LMV GK RD E+VMG
Sbjct: 187 VLNAYSYNGLIHLLLKSRFCTEAMEVYSRMILEGFRPSLQTYSSLMVGLGKRRDIESVMG 246
Query: 544 LLEEMQSLGLRPNVYTFTICIRVLGR 621
LL+EM++LGL+PNVYTFTICIRVLGR
Sbjct: 247 LLKEMETLGLKPNVYTFTICIRVLGR 272
Score = 61.2 bits (147), Expect = 2e-07
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Frame = +1
Query: 142 QPNIVHTTESCNYMLELLRGQRRVEE-MAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGI 318
+PNI+ + N +L L V+E + + +DL+ + TY + GL G +
Sbjct: 854 EPNII----THNIVLSGLVKAGNVDEALDLYYDLISDRDFSPTACTYGPLIDGLSKSGRL 909
Query: 319 RQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSAL 498
+A E M G N YN LI+ ++G A +++RMV EG++P LKTYS L
Sbjct: 910 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 969
Query: 499 MVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
+ + + + E++ GL P+V + + I LG+
Sbjct: 970 VDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGK 1010
>ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis
thaliana] gi|7270088|emb|CAB79903.1| putative protein
[Arabidopsis thaliana] gi|332660567|gb|AEE85967.1|
proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 245 bits (626), Expect = 7e-63
Identities = 125/187 (66%), Positives = 150/187 (80%)
Frame = +1
Query: 61 SSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDL 240
SS+EV LKS D + S+F+SVA N+VHTTE+CNYMLE LR ++EEMA VFDL
Sbjct: 84 SSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDL 143
Query: 241 MQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGF 420
MQK+IIKR+ TYL IFK L V GG++QAP AL MR GFVLNA+SYNGLIHLLL+S F
Sbjct: 144 MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF 203
Query: 421 RGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTI 600
+AMEVYRRM+ EG +PSL+TYS+LMV GK RD ++VMGLL+EM++LGL+PNVYTFTI
Sbjct: 204 CTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263
Query: 601 CIRVLGR 621
CIRVLGR
Sbjct: 264 CIRVLGR 270
Score = 61.2 bits (147), Expect = 2e-07
Identities = 39/136 (28%), Positives = 66/136 (48%)
Frame = +1
Query: 214 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 393
+ + + +DLM + TY + GL G + +A E M G N YN L
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 394 IHLLLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGL 573
I+ ++G A +++RMV EG++P LKTYS L+ + + + +E++ GL
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 574 RPNVYTFTICIRVLGR 621
P+V + + I LG+
Sbjct: 993 NPDVVCYNLIINGLGK 1008
Score = 55.8 bits (133), Expect = 1e-05
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Frame = +1
Query: 229 VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 408
+F M K+ ++ +++TY ++ L + G + + + ++ +G + YN +I+ L
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 409 QSGFRGQAMEVYRRM-VSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNV 585
+S +A+ ++ M S GI P L TY++L++ G E + E+Q GL PNV
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 586 YTFTICIR 609
+TF IR
Sbjct: 1068 FTFNALIR 1075
>ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 243 bits (621), Expect = 3e-62
Identities = 118/193 (61%), Positives = 152/193 (78%)
Frame = +1
Query: 43 KTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEM 222
K K +S +EV+ LKSI+DP A S+F+ V++ N VHTT++CNYMLE+LR QRR+E+M
Sbjct: 91 KNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDM 150
Query: 223 AVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHL 402
VFDLMQK++I RN+ TY+ IFK L + GGI +AP AL M GF+LNA+SYNGLIHL
Sbjct: 151 VFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHL 210
Query: 403 LLQSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPN 582
LL GF +A++VY+RM+SEG+KPS+KTYSALMVA G+ D +M LLEEM+S+GLRPN
Sbjct: 211 LL-PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPN 269
Query: 583 VYTFTICIRVLGR 621
+YT+TICIR LGR
Sbjct: 270 IYTYTICIRALGR 282
Score = 68.9 bits (167), Expect = 1e-09
Identities = 39/127 (30%), Positives = 72/127 (56%)
Frame = +1
Query: 229 VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 408
+F M K+ I+ ++++Y I+ + L + G I +A E ++ G + SYN +I+ L
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017
Query: 409 QSGFRGQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVY 588
+S +A+ ++ M + GI P L TY+AL++ G + + + EE+Q +GL P+V+
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVF 1077
Query: 589 TFTICIR 609
T+ IR
Sbjct: 1078 TYNALIR 1084
Score = 57.8 bits (138), Expect = 3e-06
Identities = 43/174 (24%), Positives = 79/174 (45%)
Frame = +1
Query: 100 DPIEALSFFQSVARQPNIVHTTESCNYMLELLRGQRRVEEMAVVFDLMQKQIIKRNMETY 279
DP +A+ F+++ ++ I+ + +CN L L R+ E +F+ + K + + TY
Sbjct: 460 DPAKAIDTFETMKKR-GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTY 518
Query: 280 LIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRGQAMEVYRRMVS 459
++ K G I +A L M G + N LI+ L ++G A +++ R+ +
Sbjct: 519 NMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKN 578
Query: 460 EGIKPSLKTYSALMVASGKIRDAETVMGLLEEMQSLGLRPNVYTFTICIRVLGR 621
+ P++ TY+ L+ GK + L M G PN TF + L +
Sbjct: 579 LKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSK 632