BLASTX nr result
ID: Akebia22_contig00021974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00021974
(1344 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 253 1e-64
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 253 1e-64
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 235 3e-59
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 233 2e-58
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 230 9e-58
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 228 4e-57
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 223 1e-55
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 218 6e-54
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 216 1e-53
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 216 2e-53
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 214 7e-53
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 214 7e-53
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 213 2e-52
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 210 1e-51
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 209 2e-51
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus... 209 3e-51
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 206 1e-50
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 202 2e-49
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 201 6e-49
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 190 1e-45
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 253 bits (646), Expect = 1e-64
Identities = 183/544 (33%), Positives = 256/544 (47%), Gaps = 102/544 (18%)
Frame = -1
Query: 1344 LSISPEQDTGYGRPIFDESLEQDKTRDNENT-SESNWEIN-----SSLVAKSGRSREWKV 1183
L +SPE + + +P+F++S E T +N S +W +N ++ K W
Sbjct: 1346 LGMSPEHSSNFEKPVFEDSAEFQNTWENHVPGSGGDWAVNQNKETTASTLKPSAWSSWGT 1405
Query: 1182 DQHSDLENTATRSG--------------WGTDNFQTQASPST-KPSPRSGGWNTQKRSSQ 1048
D+ + + +TR WGTD Q A T + SPRS G + R +
Sbjct: 1406 DKVTMKDTFSTREPDESSRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGR 1465
Query: 1047 TE-PCGPWGK---QADANIWEKSQNPI-------CQSGPCDAWGQSSEQV------DTTG 919
+ WGK +AD W K+ C + + Q TTG
Sbjct: 1466 PQFASSAWGKKIDEADKTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTG 1525
Query: 918 -WNKNDGKVQLGQWRESHVSHST-------KPLEESPSSRGWNIKESQ-----KLPSSQA 778
W KN+ ++++ Q ES V+ + PL ++ +S GW+ + KL S
Sbjct: 1526 DWKKNELQMEVVQHDESPVNEHSWDANLPEDPLAQATTSVGWDSSTGKDWTKRKLQSPSE 1585
Query: 777 ELSDVWGKRAEEADTTDWNKQKQLQIQP-----------NDWSENEGQNQWDQQ-----K 646
+ D A ++ ++ N K+ QP W++ E Q+QW+Q+
Sbjct: 1586 QQRDP----AIKSWSSSHNVMKEQSNQPASTHGWDSPGAKGWNDVEEQSQWNQRGSAVKN 1641
Query: 645 EFHVRSHAWDTNVTREQV------------------------------KKPTGSLAWDSS 556
+ SH W + + Q+ +P GS W S+
Sbjct: 1642 DQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRPEGSRGWGSN 1701
Query: 555 NAGDWXXXXXXXXXXXXXXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSI 376
N +W D D++ GIFTAT+QR+D FTSEEQ IL DVEPIM SI
Sbjct: 1702 NT-EWKNKKNRPNKPQGPLND---DYSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSI 1757
Query: 375 KRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFY 196
+RIM Q+ YND DPLS DDQ Y+LD VF HPDKAVKMGTG+DYVM S+HSSF +SRCFY
Sbjct: 1758 RRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFY 1817
Query: 195 IVSMDGRREDFSYRKCMENFVKETYPGMVQSFNAKYLRKPPHSGGGKRF-----SENREQ 31
+VS DG +EDFSYRKC+ENF+KE YP ++F KY R+P G +R NREQ
Sbjct: 1818 VVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVIPEDGGNREQ 1877
Query: 30 QM*P 19
+ P
Sbjct: 1878 SVVP 1881
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 253 bits (646), Expect = 1e-64
Identities = 183/544 (33%), Positives = 256/544 (47%), Gaps = 102/544 (18%)
Frame = -1
Query: 1344 LSISPEQDTGYGRPIFDESLEQDKTRDNENT-SESNWEIN-----SSLVAKSGRSREWKV 1183
L +SPE + + +P+F++S E T +N S +W +N ++ K W
Sbjct: 1286 LGMSPEHSSNFEKPVFEDSAEFQNTWENHVPGSGGDWAVNQNKETTASTLKPSAWSSWGT 1345
Query: 1182 DQHSDLENTATRSG--------------WGTDNFQTQASPST-KPSPRSGGWNTQKRSSQ 1048
D+ + + +TR WGTD Q A T + SPRS G + R +
Sbjct: 1346 DKVTMKDTFSTREPDESSRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGR 1405
Query: 1047 TE-PCGPWGK---QADANIWEKSQNPI-------CQSGPCDAWGQSSEQV------DTTG 919
+ WGK +AD W K+ C + + Q TTG
Sbjct: 1406 PQFASSAWGKKIDEADKTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTG 1465
Query: 918 -WNKNDGKVQLGQWRESHVSHST-------KPLEESPSSRGWNIKESQ-----KLPSSQA 778
W KN+ ++++ Q ES V+ + PL ++ +S GW+ + KL S
Sbjct: 1466 DWKKNELQMEVVQHDESPVNEHSWDANLPEDPLAQATTSVGWDSSTGKDWTKRKLQSPSE 1525
Query: 777 ELSDVWGKRAEEADTTDWNKQKQLQIQP-----------NDWSENEGQNQWDQQ-----K 646
+ D A ++ ++ N K+ QP W++ E Q+QW+Q+
Sbjct: 1526 QQRDP----AIKSWSSSHNVMKEQSNQPASTHGWDSPGAKGWNDVEEQSQWNQRGSAVKN 1581
Query: 645 EFHVRSHAWDTNVTREQV------------------------------KKPTGSLAWDSS 556
+ SH W + + Q+ +P GS W S+
Sbjct: 1582 DQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGHESETQSQWGQPSGKKSRPEGSRGWGSN 1641
Query: 555 NAGDWXXXXXXXXXXXXXXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSI 376
N +W D D++ GIFTAT+QR+D FTSEEQ IL DVEPIM SI
Sbjct: 1642 NT-EWKNKKNRPNKPQGPLND---DYSAGGIFTATRQRVDIFTSEEQDILLDVEPIMQSI 1697
Query: 375 KRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFY 196
+RIM Q+ YND DPLS DDQ Y+LD VF HPDKAVKMGTG+DYVM S+HSSF +SRCFY
Sbjct: 1698 RRIMHQAGYNDGDPLSADDQSYILDKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFY 1757
Query: 195 IVSMDGRREDFSYRKCMENFVKETYPGMVQSFNAKYLRKPPHSGGGKRF-----SENREQ 31
+VS DG +EDFSYRKC+ENF+KE YP ++F KY R+P G +R NREQ
Sbjct: 1758 VVSTDGHKEDFSYRKCLENFIKEKYPDNAETFIGKYFRRPRAGGNRERSVIPEDGGNREQ 1817
Query: 30 QM*P 19
+ P
Sbjct: 1818 SVVP 1821
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 235 bits (600), Expect = 3e-59
Identities = 158/436 (36%), Positives = 214/436 (49%), Gaps = 31/436 (7%)
Frame = -1
Query: 1293 ESLEQD-KTRDNENTSESNWEINSSLVAKS-GRSREWKVDQHSDLENTATRSGWGTDNFQ 1120
ESL D K N + W+ S+ A++ + W + S+ +TA SGWG
Sbjct: 1496 ESLGWDSKGNSNPGDAACGWKAASTWGAENTDGDKLWGKEVSSNQADTA--SGWGKPKSP 1553
Query: 1119 --TQASPSTKPSPRSG-GWNT-------------QKRSSQTEPCGPWGKQADANIWEKSQ 988
+ STK S +S GW Q + Q + G WG + +N
Sbjct: 1554 EISLGWGSTKESVKSDRGWGVSSSGGGRDKKTENQSLAGQGKESGGWGNKVTSN------ 1607
Query: 987 NPICQSGPCDAWGQSSEQVDTTGW--NKNDGKVQLGQW----------RESHVSHSTKPL 844
Q+ WG+ ++ GW +K GK ++ +W E++ ++ + L
Sbjct: 1608 ----QADTASGWGKPKSSENSQGWGLSKESGK-EVHEWGVPNSAGGNGSETNNNNENQSL 1662
Query: 843 EESPSSRGWNIKESQKLPSSQAELSDVWGKRAEEADTTDWNKQKQLQIQPNDWS-ENEGQ 667
E GW+ K S S+Q + WGK A + W ++ + W N G
Sbjct: 1663 VEQGKESGWDNKAS----SNQEGTASGWGKPKSPALSEGWGSPREPVKAVHGWGVPNSGG 1718
Query: 666 NQWDQQKEFHVRSHAWDTNVTREQVKKPTGSLAWDSSNAGDWXXXXXXXXXXXXXXLDHQ 487
R W + + GS W S+N GDW
Sbjct: 1719 GNGSG------RDQQWGQQSREFKKDRFEGSRGWGSNN-GDWKNKRNRPSKP-------H 1764
Query: 486 TDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYV 307
D N SGIFT T+QRLD FTS+EQ IL+D+EP+MLSI+RIM Q+ YND DPLS DDQ YV
Sbjct: 1765 EDLNASGIFTTTRQRLDVFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSADDQSYV 1824
Query: 306 LDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCMENFVKE 127
LDNVF YHPDKAVKMG G+D+V S+HS+FQ+SRCFYIVS DG ++DFSYRKC+ENF+K
Sbjct: 1825 LDNVFHYHPDKAVKMGAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKG 1884
Query: 126 TYPGMVQSFNAKYLRK 79
YP + F AKY +
Sbjct: 1885 KYPDLADEFIAKYFAR 1900
Score = 66.6 bits (161), Expect = 2e-08
Identities = 66/274 (24%), Positives = 103/274 (37%), Gaps = 8/274 (2%)
Frame = -1
Query: 1341 SISPEQDTGYGRPIFDESLEQDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLE 1162
++SPE ++ +P F++S E N+ +ESNWE SSL +S S W VD++ +
Sbjct: 1286 NLSPEHNSSSDKPTFEDSAEFQDFLGNQ-PAESNWEKISSLKDRSRSSGNWDVDKN---D 1341
Query: 1161 NTATRSGWGTDNFQTQASPSTKPSPRSGGWNTQKRSSQTEPCGPWGKQADANIWEKSQNP 982
W +A+ S GW+T + N W S+N
Sbjct: 1342 GAVKEKPWSLGMNTAEAN-----DVASSGWDTA------------AARTTNNSW-NSENN 1383
Query: 981 ICQSGPCDAWGQSSEQVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNI--- 811
+ QS W E H +TK EE +S W+
Sbjct: 1384 VAQSNSFSGWATKKP--------------------EPHNGFATKVQEEPTTSNDWDAGAA 1423
Query: 810 --KESQKLPSSQAELSDVWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFH 637
++ + ++ S W + + D + NK K +P D ++ G + WD +
Sbjct: 1424 WGRKDRDNKFAETNASKSWWGKVTDGDESGQNKSKNK--RPED--QDVGTHGWDDKMSQD 1479
Query: 636 VRSHAWDTNVTREQVKKPTGSLAWDS---SNAGD 544
W + T+E T SL WDS SN GD
Sbjct: 1480 QSISGWASKTTQEAT---TESLGWDSKGNSNPGD 1510
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 233 bits (593), Expect = 2e-58
Identities = 170/506 (33%), Positives = 238/506 (47%), Gaps = 76/506 (15%)
Frame = -1
Query: 1341 SISPEQDTGYGRPIFDESLEQDKTRDNENTSESNWEINSSL--VAKSGRSREW-KVDQHS 1171
S+SPE G +P+F+++ + + D + +ES+WE SL V+ S W K +
Sbjct: 1282 SLSPEHSNGLDKPVFEDAADFENDLDFQ-PAESSWEKGVSLDKVSSWNVSSAWNKKAEDG 1340
Query: 1170 D-----LENTATRSGW---GTDNFQTQ----ASPSTKPSPRSGGWNTQKRSSQTEPCGPW 1027
D L +T +S W GT +TQ A+ ST W T K +Q
Sbjct: 1341 DKFAAALTSTTKQSDWCDWGTSKSKTQDAAAAATSTTKKTEWCDWGTSKSKTQEVAATVT 1400
Query: 1026 GKQADANIW-----EKSQNPICQSGPCDA--------WGQS-SEQVDTTGWNKNDGKVQL 889
G A+ N W KS+ + + WG S S+ D + +
Sbjct: 1401 GT-AEQNEWCDWRTSKSKIQVVAAAVTSTTKQSEWGDWGTSKSKTQDVAAAVTGTMETEW 1459
Query: 888 GQWRESHVSHSTKPLEESPSSRG-----------WNIK---------ESQKLPSSQAELS 769
G W + +K + SP G W +K E + S+ A+
Sbjct: 1460 GDWGKG----KSKTQDVSPKVDGTCVNEQTKLSDWGLKKNDTQDVSMEEKTFKSNGADTG 1515
Query: 768 DVWG---KRAEEADTTD------WNKQKQLQIQPNDWSENEGQNQWDQQKEFHVRSHAWD 616
WG K +E+ D D W Q + + D ++ + W+QQK S W
Sbjct: 1516 TSWGTMGKESEKPDANDALPWSGWGTQDVIPTKTLD--DSSKSSGWEQQKSPEC-SQGWG 1572
Query: 615 TNVTREQVKKPTGSLAWDSSN------------------AGDWXXXXXXXXXXXXXXLDH 490
+ ++ +P S WD+ N + W
Sbjct: 1573 S---LDESNQPASSNGWDTPNGLGSTQSEKQHQWGQSRGSRRWASDASKKNHPVKSARVM 1629
Query: 489 QTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLY 310
D + + ++TAT+QRLD FTSEEQ IL+DVEP+M SI++IM QS YND DPLS DQ +
Sbjct: 1630 NDDSSMAAMYTATRQRLDMFTSEEQDILSDVEPLMQSIRKIMHQSGYNDGDPLSALDQSF 1689
Query: 309 VLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCMENFVK 130
+L+NVFT+HPDKA+KMG GVDYVM SKHS+F DSRCFY+VS DGR++DFSYRKC++NF+K
Sbjct: 1690 ILENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIK 1749
Query: 129 ETYPGMVQSFNAKYLRKPPHSGGGKR 52
YP M F AKY RKP G +R
Sbjct: 1750 GKYPDMADVFIAKYFRKPRFGGFRER 1775
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 230 bits (587), Expect = 9e-58
Identities = 152/433 (35%), Positives = 216/433 (49%), Gaps = 33/433 (7%)
Frame = -1
Query: 1275 KTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGWGT-------DNFQT 1117
K ++ SE+ W + + + S W LE+ T S WG+ D+F +
Sbjct: 1579 KNSGGDHQSEAGWNDGQASMDREKVSDRWDRKATQKLESHQT-SSWGSPTVGDSKDSFPS 1637
Query: 1116 QASPSTKPSPRSGGWNTQKRSSQTEPCG--PWGKQADANIWEKS--QNPICQSGPCDAWG 949
+A + S + W+ QK ++ G WG+Q ++ + S N SG WG
Sbjct: 1638 KAVDHSD-SVVNHSWDRQKSPEASQGFGNDAWGQQKSRDVIKPSLANNESNLSG----WG 1692
Query: 948 QSSEQVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLP---SSQA 778
E N+G H ++S +RGW+ +E P
Sbjct: 1693 SQIES--------NEGS--------DHGFDQVTNEQKSSDTRGWDSQEKTDKPWDKQKSL 1736
Query: 777 ELSDVWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQ------------WDQQKEFHV 634
E S WG + + + W + ++ + + S+++ Q W+QQK V
Sbjct: 1737 EASQSWGSQNDSLGS--WGQPQRASEECSRESQDDSSTQFSQLKPPETSLGWEQQKSPEV 1794
Query: 633 RSHAWDTNV-TREQV------KKPTGSLAWDSSNAGDWXXXXXXXXXXXXXXLDHQTDWN 475
SH W +N + EQ KK GS W NAG+W D D N
Sbjct: 1795 -SHGWGSNKESSEQTSSHGWDKKNQGSKGW-GGNAGEWKNRKNRPPKSPGMSND---DAN 1849
Query: 474 KSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVLDNV 295
++TA+ QRLD FTSEEQ ILAD+EPIM SI+++M QS YND DPLS +DQ +VL +V
Sbjct: 1850 LRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSV 1909
Query: 294 FTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCMENFVKETYPG 115
F +HPDKA KMG G+D+ M S+HSSFQ+SRCFY+V+ DG +EDFSYRKC++NF+K YP
Sbjct: 1910 FNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPD 1969
Query: 114 MVQSFNAKYLRKP 76
+ + F AKY RKP
Sbjct: 1970 LAEMFVAKYFRKP 1982
Score = 59.7 bits (143), Expect = 3e-06
Identities = 66/314 (21%), Positives = 113/314 (35%), Gaps = 47/314 (14%)
Frame = -1
Query: 1344 LSISPEQDTGYGRPIFDESLEQDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDL 1165
L++SPE + +P+F++S E + DN ES WE SL A S +W+ +++
Sbjct: 1340 LTLSPEPFSTSEKPVFEDSAEFEHCLDNY-PGESKWEKAPSLGAVSTGGGQWESNENGKA 1398
Query: 1164 ENTA-------------------------------TRSGWG----------------TDN 1126
N++ T S WG T
Sbjct: 1399 TNSSDGNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATNSSNDNDWSNCSTKE 1458
Query: 1125 FQTQASPSTKPSPRSGGWNTQKRSSQTEPCGPWGKQADANIWEKSQNPICQSGPCDAWGQ 946
+ + S + +P+SGGW++ WG + + +++ P +S +
Sbjct: 1459 VERDSFTSMEKTPKSGGWDS---------ASTWGTKTKDDSFKRETAP-KKSSQWSGLQK 1508
Query: 945 SSEQVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLPSSQAELSD 766
+ K + + G W + S T E++ W+ + K S Q ++ +
Sbjct: 1509 DKAETQDAFHKKAEMASKSGGWEDKAWSRGTSKTEDN-----WSSQVKDKAESFQVQVQE 1563
Query: 765 VWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFHVRSHAWDTNVTREQVKK 586
V K T W K Q ++ N+GQ D++K S WD T++
Sbjct: 1564 VSSKTNGWGSTGGWTKNSGGDHQ-SEAGWNDGQASMDREKV----SDRWDRKATQKLESH 1618
Query: 585 PTGSLAWDSSNAGD 544
T S W S GD
Sbjct: 1619 QTSS--WGSPTVGD 1630
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 228 bits (582), Expect = 4e-57
Identities = 151/433 (34%), Positives = 216/433 (49%), Gaps = 33/433 (7%)
Frame = -1
Query: 1275 KTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGWGT-------DNFQT 1117
K ++ SE+ W + + + S W LE+ T S WG+ D+F +
Sbjct: 1519 KNSGGDHQSEAGWNDGQASMDREKVSDRWDRKATQKLESHQT-SSWGSPTVGDSKDSFPS 1577
Query: 1116 QASPSTKPSPRSGGWNTQKRSSQTEPCG--PWGKQADANIWEKS--QNPICQSGPCDAWG 949
+A + S + W+ QK ++ G WG+Q ++ + S N SG WG
Sbjct: 1578 KAVDHSD-SVVNHSWDRQKSPEASQGFGNDAWGQQKSRDVIKPSLANNESNLSG----WG 1632
Query: 948 QSSEQVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLP---SSQA 778
E N+G H ++S +RGW+ +E P
Sbjct: 1633 SQIES--------NEGS--------DHGFDQVTNEQKSSDTRGWDSQEKTDKPWDKQKSL 1676
Query: 777 ELSDVWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQ------------WDQQKEFHV 634
E S WG + + + W + ++ + + S+++ Q W+QQK V
Sbjct: 1677 EASQSWGSQNDSLGS--WGQPQRASEECSRESQDDSSTQFSQLKPPETSLGWEQQKSPEV 1734
Query: 633 RSHAWDTNV-TREQV------KKPTGSLAWDSSNAGDWXXXXXXXXXXXXXXLDHQTDWN 475
SH W ++ + EQ KK GS W NAG+W D D N
Sbjct: 1735 -SHGWGSHKESSEQTSSHGWDKKNQGSKGW-GGNAGEWKNRKNRPPKSPGMSND---DAN 1789
Query: 474 KSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVLDNV 295
++TA+ QRLD FTSEEQ ILAD+EPIM SI+++M QS YND DPLS +DQ +VL +V
Sbjct: 1790 LRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSV 1849
Query: 294 FTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCMENFVKETYPG 115
F +HPDKA KMG G+D+ M S+HSSFQ+SRCFY+V+ DG +EDFSYRKC++NF+K YP
Sbjct: 1850 FNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPD 1909
Query: 114 MVQSFNAKYLRKP 76
+ + F AKY RKP
Sbjct: 1910 LAEMFVAKYFRKP 1922
Score = 59.7 bits (143), Expect = 3e-06
Identities = 66/314 (21%), Positives = 113/314 (35%), Gaps = 47/314 (14%)
Frame = -1
Query: 1344 LSISPEQDTGYGRPIFDESLEQDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDL 1165
L++SPE + +P+F++S E + DN ES WE SL A S +W+ +++
Sbjct: 1280 LTLSPEPFSTSEKPVFEDSAEFEHCLDNY-PGESKWEKAPSLGAVSTGGGQWESNENGKA 1338
Query: 1164 ENTA-------------------------------TRSGWG----------------TDN 1126
N++ T S WG T
Sbjct: 1339 TNSSDGNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATNSSNDNDWSNCSTKE 1398
Query: 1125 FQTQASPSTKPSPRSGGWNTQKRSSQTEPCGPWGKQADANIWEKSQNPICQSGPCDAWGQ 946
+ + S + +P+SGGW++ WG + + +++ P +S +
Sbjct: 1399 VERDSFTSMEKTPKSGGWDS---------ASTWGTKTKDDSFKRETAP-KKSSQWSGLQK 1448
Query: 945 SSEQVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLPSSQAELSD 766
+ K + + G W + S T E++ W+ + K S Q ++ +
Sbjct: 1449 DKAETQDAFHKKAEMASKSGGWEDKAWSRGTSKTEDN-----WSSQVKDKAESFQVQVQE 1503
Query: 765 VWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFHVRSHAWDTNVTREQVKK 586
V K T W K Q ++ N+GQ D++K S WD T++
Sbjct: 1504 VSSKTNGWGSTGGWTKNSGGDHQ-SEAGWNDGQASMDREKV----SDRWDRKATQKLESH 1558
Query: 585 PTGSLAWDSSNAGD 544
T S W S GD
Sbjct: 1559 QTSS--WGSPTVGD 1570
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 223 bits (569), Expect = 1e-55
Identities = 155/453 (34%), Positives = 220/453 (48%), Gaps = 47/453 (10%)
Frame = -1
Query: 1293 ESLEQDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGW---GTDNF 1123
E LE K R++ + S W ++ A+S W+ +T + +GW G
Sbjct: 1554 EVLEDSKARED---ATSGWGTENAENAQS----TWRT-------STESENGWSGRGGSKV 1599
Query: 1122 QTQASPSTKPSPRSGGWNTQK---RSSQTEPCGP-WG----------------------- 1024
++ S K GWN R QTE G WG
Sbjct: 1600 ESTDVQSQKAVENPKGWNDFSAGVRKPQTENAGSGWGMKGSEKKGDIELEQDESTRHSWK 1659
Query: 1023 -KQADAN---IWEKSQNPICQSGPCDAWGQ-SSEQVDTTGWNKNDGKVQLGQWRESHVSH 859
K ADA+ WE+ ++P G W Q S ++ W GQ + VS
Sbjct: 1660 QKSADASSQGAWERQKSPDTSKG---TWEQPKSAEMSHGAW---------GQQKSPDVSQ 1707
Query: 858 STKPLEE--SPSSRG-WNIKESQKLPSS---QAELSDV----WGK-RAEEADTTDWNKQK 712
LE+ S +S+G W ++S ++P Q D+ WG+ ++ E W +QK
Sbjct: 1708 GVWGLEKPASTNSQGSWGQQKSPEIPQGNWGQQTSPDISQGTWGQQKSPEMSQGSWGQQK 1767
Query: 711 QLQIQPNDWSENEGQNQWDQQKEFHVRSHA-WDTNVTREQVKKPTGSLAWDSSNAGDWXX 535
P+D S+ NQWD Q E V H W N + K+ G +W NAG+W
Sbjct: 1768 -----PSDTSQPATVNQWDSQSEAAVERHQQWGHNGDSNKRKRFEGGRSW-GPNAGEWKG 1821
Query: 534 XXXXXXXXXXXXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQS 355
D D + + I+TAT+QRLD FTSEEQ +L+ +EP MLSI+RIM QS
Sbjct: 1822 KNSRPAKSPGMVND---DSSVAAIYTATRQRLDIFTSEEQDVLSHIEPTMLSIRRIMHQS 1878
Query: 354 RYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGR 175
YND D LS +D ++LD VF +HP+K KMG+G+DY +H SFQ+SRC +++S DGR
Sbjct: 1879 GYNDGDQLSAEDHSFILDKVFNFHPEKEAKMGSGIDYFTVDRHGSFQESRCLFVISTDGR 1938
Query: 174 REDFSYRKCMENFVKETYPGMVQSFNAKYLRKP 76
+EDFSYRKC++N +KE YP + ++FN KY +P
Sbjct: 1939 KEDFSYRKCLQNMIKEKYPELAEAFNDKYFSRP 1971
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 218 bits (554), Expect = 6e-54
Identities = 156/446 (34%), Positives = 218/446 (48%), Gaps = 45/446 (10%)
Frame = -1
Query: 1215 AKSGRSREWKVDQHSDLENTATR--SGWGTD---------NFQTQASPSTKPSPRSGGWN 1069
A G+S E K+++ +E T + S WGT+ + A+P+ P GW
Sbjct: 1459 ASWGKSSEDKLEE---VETTVAKPSSAWGTEASWDKSSEVTLEKVAAPAENPL---SGWG 1512
Query: 1068 TQKRSSQTEPCGPWGKQADANIWEKSQNPICQSGPCDAWGQSSEQVDTTGWNKN------ 907
T+ + S GK +D + W+ N +WG++ + + +GW+
Sbjct: 1513 TEAQDS--------GKSSDWSEWKDHANATA------SWGRNGSE-ENSGWDTKASWNTK 1557
Query: 906 --DGKVQLGQWRESHVS-------HSTKPLEES--PSSR---------GWNIKESQKLPS 787
D +G E+ S STK E+S PS+ GWN+ +++
Sbjct: 1558 ALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNVPDAKGTDD 1617
Query: 786 SQAELSDVWGKR-----AEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEF---HVR 631
S WGK+ A+ D + W KQK + N+ S+ N WD
Sbjct: 1618 SS------WGKQKLTENAKGTDDSSWGKQKHTE---NESSQPASSNAWDLPDATGGSETE 1668
Query: 630 SHAWDTNVTREQVKKPTGSLAWDSSNAGDWXXXXXXXXXXXXXXLDHQTDWNKSGIFTAT 451
W + +E KK G W SS+ G+W D T + ++T T
Sbjct: 1669 MQVWGQS-RKEPFKKNRG---WASSS-GEWKGKKNRPPRSPGVVNDDST---VNAMYTVT 1720
Query: 450 KQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKA 271
+QRLD FTSEEQ IL+DVEPIM SI+RIM QS YND D LS DD+ ++ DNVF YHPDKA
Sbjct: 1721 RQRLDMFTSEEQDILSDVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKA 1780
Query: 270 VKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCMENFVKETYPGMVQSFNAK 91
+KMG G+D+ KH SFQDSRC ++VS DG ++DFSYRKC+E+F++ YP V F K
Sbjct: 1781 MKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPEFVDEFIGK 1840
Query: 90 YLRKPPHSGGGKRFSENREQQM*P*P 13
Y R+ P SGG NRE + P P
Sbjct: 1841 YFRR-PRSGG------NREPSLPPVP 1859
Score = 59.3 bits (142), Expect = 4e-06
Identities = 68/285 (23%), Positives = 113/285 (39%), Gaps = 18/285 (6%)
Frame = -1
Query: 1341 SISPEQDTGYGRPIFDESLEQDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLE 1162
S+SPE + +PIF++ +E +N+ +E NW+ + KS + K+ +
Sbjct: 1283 SLSPEHNLCSDKPIFEDLVEDQSWLENKQENE-NWDSEAD-CRKSSEDKWEKLGTSLEKP 1340
Query: 1161 NTA--TRSGWG---TDNFQTQASPSTKPSPRSGGWNTQKRSSQTEPCGPWGKQADANIWE 997
++ T WG D + SPS KPS GW T+ WG ++ ++ WE
Sbjct: 1341 SSGWRTEGAWGKSSDDKLEKAGSPSRKPS----GWGTE---------ASWG-ESSSDKWE 1386
Query: 996 KSQNPICQSGPCDAWGQSSEQVDTTGWNKNDG----KVQLGQWRESHVSHSTKPLEESPS 829
+P +S WG + W K+ G V+ + S S +SP
Sbjct: 1387 NVGSPAAKS--FSEWGTEA------SWGKSFGDKPENVRSPAAKTSSGWGSEASWGKSPG 1438
Query: 828 SRGWNIKESQKLPSSQAELSDVWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQ 649
R N+ S P S WG +A W K + +++ + + + + W +
Sbjct: 1439 DRQENVGRSASKPLSG------WGAKA------SWGKSSEDKLEEVETTVAKPSSAWGTE 1486
Query: 648 KEFHVRSHAWD--TNVTREQVKKPT-------GSLAWDSSNAGDW 541
+WD + VT E+V P G+ A DS + DW
Sbjct: 1487 A-------SWDKSSEVTLEKVAAPAENPLSGWGTEAQDSGKSSDW 1524
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 216 bits (551), Expect = 1e-53
Identities = 140/424 (33%), Positives = 202/424 (47%), Gaps = 22/424 (5%)
Frame = -1
Query: 1281 QDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLENTA-----TRSGWGTDNFQT 1117
+D N+N+ W NS+ KS +S EW + E A + WG+ +
Sbjct: 1629 KDDVTQNDNSGSDAWGANSTGQTKS-KSNEWSGRGKNKSEIPAGGSENVQDSWGSGTRKD 1687
Query: 1116 QASPSTKPSPRSGGWNTQKRSSQTEPCGPWGKQADANIWEKSQNPI--CQSGPCDAWGQS 943
T S GG + ++ + WG+ KS+ P C++ D+WG
Sbjct: 1688 VTQVDTSVSGSWGGSRKDQTNTTSNEWAGWGRN-------KSEIPAGGCETVQEDSWGSG 1740
Query: 942 SEQVDTT--------GWNKNDG---KVQLGQWRESHVSHS---TKPLEESPSSRGWNIKE 805
+ D T W N K ++ +W + V + ++ L+E + G N+K
Sbjct: 1741 KLKDDVTQKDNSGSGAWGANKTGLTKTEVDEWARNKVETADGGSEKLQEDSWNSG-NLKS 1799
Query: 804 SQKLPSSQAELSDVWGK-RAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFHVRS 628
K+ ++ WGK + + + D + Q W + D +K F
Sbjct: 1800 ESKVGNAS------WGKPNSSGSQSWDSHNQSNQNSSSRGWESHIASANSDSEKGFQ--- 1850
Query: 627 HAWDTNVTREQVKKPTGSLAWDSSNAGDWXXXXXXXXXXXXXXLDHQTDWNKSGIFTATK 448
W K SN+GDW N++
Sbjct: 1851 --WGKQGRESFKKNRFEGSQGRGSNSGDWK--------------------NRNRPPRTPG 1888
Query: 447 QRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAV 268
QRLD ++SEEQ +L ++EPIM SI+RIMQQ YND DPL+ DDQL+VL+NVF +HPDK
Sbjct: 1889 QRLDLYSSEEQDVLKEIEPIMQSIRRIMQQQGYNDGDPLAADDQLFVLENVFEHHPDKDT 1948
Query: 267 KMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCMENFVKETYPGMVQSFNAKY 88
KMG G+DYVM +KHSSFQDSRCFY+V DGRREDFSYRKC++N++++ YP + +SF KY
Sbjct: 1949 KMGAGIDYVMVNKHSSFQDSRCFYVVLKDGRREDFSYRKCLDNWIRKKYPELAESFFGKY 2008
Query: 87 LRKP 76
RKP
Sbjct: 2009 FRKP 2012
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 216 bits (549), Expect = 2e-53
Identities = 144/446 (32%), Positives = 208/446 (46%), Gaps = 39/446 (8%)
Frame = -1
Query: 1296 DESLEQDKTRDNENTSESNW-EINSS---LVAKSGRSREWKVD-QHSDLENTATRSGWGT 1132
D S N ++ +S W +I +SG +++WK D D N+ WG+
Sbjct: 1537 DSSKSGAPANTNHSSDQSCWGQITGGEERAQGESGGTKKWKADVSQEDSTNSGGWKAWGS 1596
Query: 1131 DNFQTQASPSTKPSPRSGGWNTQK-------RSSQTEPCGPWGKQADANIWEKSQNPICQ 973
+ STK WN+QK ++ WG + +S
Sbjct: 1597 SKPEVHEGESTKVQD---SWNSQKWKAGEDVSQKDSQKSSAWGATKPKSNDNRS------ 1647
Query: 972 SGPCDAWGQSSEQVD--------TTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGW 817
+WGQ +++ + W + V+ + V++S+ +SP +R W
Sbjct: 1648 -----SWGQKKDEIHVMPEDSSRSNAWEQKPENVKDSWVAKVPVANSSWGKAKSPENRPW 1702
Query: 816 NIKESQK----LPSSQAELSDVWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQ 649
+ K P+SQ ++ W + E + W K K + QP D S+NE + W +
Sbjct: 1703 DSKNEPNNSFGKPNSQE--NEPWDSKNES--DSSWGKPKSQESQPWD-SKNESNSSWGKP 1757
Query: 648 KEFHVRSHAWDTNVTREQVKKPTGSLAWDSSNAG---------DWXXXXXXXXXXXXXXL 496
K +H WD+ + + + GS WDS A W
Sbjct: 1758 KS--QENHPWDS---KNESNQTAGSRGWDSQVASANSESDKSFQWGKQGRDSFKKNRFEG 1812
Query: 495 DHQT-----DW-NKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDP 334
DW N+S QR + +T EEQ I+ D+EPI+ SI+RIMQ YND DP
Sbjct: 1813 SQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDP 1872
Query: 333 LSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYR 154
L+ +DQ YVL+NVF +HPDK KMG GVD+VM SKHS+FQDSRC Y+V DG++EDFSYR
Sbjct: 1873 LANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYR 1932
Query: 153 KCMENFVKETYPGMVQSFNAKYLRKP 76
KC+EN V++ YP +SF KY RKP
Sbjct: 1933 KCLENLVRKKYPETAESFCGKYFRKP 1958
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 214 bits (545), Expect = 7e-53
Identities = 154/446 (34%), Positives = 216/446 (48%), Gaps = 45/446 (10%)
Frame = -1
Query: 1215 AKSGRSREWKVDQHSDLENTATR--SGWGTD---------NFQTQASPSTKPSPRSGGWN 1069
A G+S E K+++ +E T + S WGT+ + A+P+ P GW
Sbjct: 1457 ASWGKSSEDKLEE---VETTVAKPSSAWGTEASWDKSSEVTLEKVAAPAENPL---SGWG 1510
Query: 1068 TQKRSSQTEPCGPWGKQADANIWEKSQNPICQSGPCDAWGQSSEQVDTTGWNKN------ 907
T+ + S GK +D + W+ N +WG++ + + +GW+
Sbjct: 1511 TEAQDS--------GKSSDWSEWKDHANATA------SWGRNGSE-ENSGWDTKASWKTK 1555
Query: 906 --DGKVQLGQWRESHVS-------HSTKPLEES--PSSR---------GWNIKESQKLPS 787
D +G E+ S STK E+S PS+ GWN+ P
Sbjct: 1556 ALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSANEKSIVHQIGGWNV------PD 1609
Query: 786 SQAELSDVWGKR-----AEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEF---HVR 631
++ WGK+ A+ D + W KQK + N+ + N WD
Sbjct: 1610 AKGTDDSCWGKQKLTENAKGTDDSSWGKQKHTE---NESPQPASSNAWDLPDATGGSETE 1666
Query: 630 SHAWDTNVTREQVKKPTGSLAWDSSNAGDWXXXXXXXXXXXXXXLDHQTDWNKSGIFTAT 451
W + +E KK G W SS+ G+W D T + ++T T
Sbjct: 1667 MQVWGQS-RKEPFKKNRG---WASSS-GEWKGKKNRPPRSPGVVNDDST---VNAMYTVT 1718
Query: 450 KQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKA 271
+QRLD FTSEEQ IL+ VEPIM SI+RIM QS YND D LS DD+ ++ DNVF YHPDKA
Sbjct: 1719 RQRLDMFTSEEQDILSHVEPIMRSIRRIMHQSGYNDGDRLSADDKSFIFDNVFNYHPDKA 1778
Query: 270 VKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCMENFVKETYPGMVQSFNAK 91
+KMG G+D+ KH SFQDSRC ++VS DG ++DFSYRKC+E+F++ YP +V F K
Sbjct: 1779 MKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGKYPDLVDEFIGK 1838
Query: 90 YLRKPPHSGGGKRFSENREQQM*P*P 13
Y R+ P SGG NRE + P P
Sbjct: 1839 YFRR-PRSGG------NREPSLPPVP 1857
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 214 bits (545), Expect = 7e-53
Identities = 156/472 (33%), Positives = 214/472 (45%), Gaps = 57/472 (12%)
Frame = -1
Query: 1263 NENTSESNWEINSSLVAKSGRSREWKV--DQHSDLENTATRSGWGTDNFQTQASPSTKPS 1090
N+N+ +S+W N S +W Q S W D Q +S S
Sbjct: 1790 NQNSDQSSWGRNKSGEQDGAERSQWASGSSQKSGAWEANPSQKWNADLVQEDSSRSNNDE 1849
Query: 1089 PR--SGGWNTQKRSSQTEPCGPWGKQADANIWE----KSQNPICQSGP-CDAWGQSSEQV 931
+ SGGW SS+TE K+ + W+ K+ + Q P +WG + +
Sbjct: 1850 SKTNSGGWKAWG-SSKTEVHEGESKKVQEDSWKSQKWKAGADVTQDSPKMGSWGATKDAT 1908
Query: 930 -----DTTGWNK-----NDG---KVQLGQWRESHVSHSTKPL-----EESPSSRGWNIKE 805
D + W K +DG K+Q W +K + E+S S W K
Sbjct: 1909 KPKSNDWSSWGKKKDEIHDGGSEKIQEDSWSSGKRKAESKSVADVMQEDSSKSNTWEHKS 1968
Query: 804 SQKLPSSQAELSDVWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFH--VR 631
++ D W + A+++ W K K + QP WD + E +
Sbjct: 1969 D--------DVKDSWDAKVPVANSS-WGKPKSQENQP-----------WDSKNESNPTAS 2008
Query: 630 SHAWDTNVT----------------REQVKK-----PTGSLAWDSSNAGDWXXXXXXXXX 514
S WD+ V RE KK GS W SNAGDW
Sbjct: 2009 SRGWDSQVASANSDSDKNFQWGKPGRESFKKNRFEGSQGSQGW-GSNAGDWK-------- 2059
Query: 513 XXXXXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDP 334
NK+ RLD ++SEEQ IL D+EPI+ SI+RIMQQ YND DP
Sbjct: 2060 ------------NKNRPARPPGPRLDLYSSEEQDILKDIEPIVQSIRRIMQQQGYNDGDP 2107
Query: 333 LSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYR 154
L+ +DQ YVL+NVF +HPDK KMG G+D+VM S+HS+FQ+SRCFY+V DG++EDFSYR
Sbjct: 2108 LAAEDQQYVLENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRCFYVVLKDGKKEDFSYR 2167
Query: 153 KCMENFVKETYPGMVQSFNAKYLRKP-------PHSGGGKRFSENREQQM*P 19
KC+E+FV++ Y +SF KY RKP +SGG + + EQ P
Sbjct: 2168 KCLESFVRKKYADTAESFCGKYFRKPRPKRDQIANSGGEQTANPGGEQTATP 2219
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 213 bits (542), Expect = 2e-52
Identities = 138/420 (32%), Positives = 203/420 (48%), Gaps = 13/420 (3%)
Frame = -1
Query: 1284 EQDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGWGTDNFQTQASP 1105
++D T++ +N+ W+ N++ KS +W + E+ S WG+ + + +
Sbjct: 1673 KKDVTQE-DNSRLGAWDANAADQTKSNEWSDWGKKKEVTQEDNVQDS-WGSGKRKDKVTQ 1730
Query: 1104 STKPSPRSGGWNTQKRSSQTEPCGPWGKQADANIWEKSQNPICQSGP----CDAWGQSSE 937
SGGW + W W K+++ I G D+WG
Sbjct: 1731 EDNSG--SGGWGANRTDLAKSKSSEWSS------WGKNKSEIPAGGSENVQNDSWGSGKL 1782
Query: 936 QVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLPSSQAELSDVWG 757
+ DT +N G + E+ S KP E++ +S W K K+ ++ WG
Sbjct: 1783 EDDTQ--KENSGSAWVRNKAETIDGGSEKPQEDAWNSGNW--KAESKVGNAS------WG 1832
Query: 756 K-RAEEADTTDWNKQKQLQIQPNDW--------SENEGQNQWDQQKEFHVRSHAWDTNVT 604
K ++ E+ D + Q W SE+E QW +Q + + ++ +
Sbjct: 1833 KPKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRFEGSQG 1892
Query: 603 REQVKKPTGSLAWDSSNAGDWXXXXXXXXXXXXXXLDHQTDWNKSGIFTATKQRLDQFTS 424
R SNAGDW N++ A QRLD ++S
Sbjct: 1893 R-------------GSNAGDWK--------------------NRNRPPRAPGQRLDIYSS 1919
Query: 423 EEQSILADVEPIMLSIKRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDY 244
EQ +L D+EPIM SI+RIMQQ YND DPL+ +DQL+VL+NVF +HPDK KMGTG+DY
Sbjct: 1920 GEQDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDY 1979
Query: 243 VMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCMENFVKETYPGMVQSFNAKYLRKPPHSG 64
VM +KHSSFQ+SRCFY+V DG +DFSYRKC+ N++ + YP + +SF KY RKP G
Sbjct: 1980 VMVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARG 2039
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 210 bits (534), Expect = 1e-51
Identities = 147/447 (32%), Positives = 209/447 (46%), Gaps = 40/447 (8%)
Frame = -1
Query: 1284 EQDKTRDNE------NTSESNWEINSSLVAKSGRSREWKVD--------------QHSDL 1165
+Q KT+ NE N SE + ++ S S +WK D +D
Sbjct: 1585 DQTKTKSNEWSARVSNKSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQ 1644
Query: 1164 ENTATRSGWGTDNFQTQASPSTKPSPRSGGWNTQKRSSQTEPCGPWG---------KQAD 1012
+ SGWG TQ + + S SG + G WG K ++
Sbjct: 1645 TKSNEWSGWGKKKDVTQED-NVQHSWGSGKRKDKVTQEDNSGSGDWGANRTDLAITKSSE 1703
Query: 1011 ANIWEKSQNPICQSGPC----DAWGQ---SSEQVDTTG---WNKNDGKVQLGQWRESHVS 862
+ W K++ I G D+WG + Q D +G W +N G + E+
Sbjct: 1704 WSSWGKNKTEIPAGGSANVQNDSWGLGKLNDTQKDNSGCGAWGENSGSAWVRNKAETIDG 1763
Query: 861 HSTKPLEESPSSRGWNIKESQKLPSSQAELSDVWGK-RAEEADTTDWNKQKQLQIQPNDW 685
S KP E++ +S W K K+ ++ WGK ++ E+ D + Q W
Sbjct: 1764 GSEKPQEDAWNSGNW--KAESKVGNT------TWGKPKSSESHAWDSHNQSNQNSSSQGW 1815
Query: 684 SENEGQNQWDQQKEFHVRSHAWDTNVTREQVKKPTGSLAWDSSNAGDWXXXXXXXXXXXX 505
+ + +K F W + + GS SNAGDW
Sbjct: 1816 ESHIASANSENEKGFQ-----WGKGRDSFKKNRFEGSQG-RGSNAGDWK----------- 1858
Query: 504 XXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDPLSP 325
N++ A QRLD ++SEEQ +L D+EPIM SI+RIMQQ Y+D DPL+
Sbjct: 1859 ---------NRNRPPRAPGQRLDIYSSEEQDVLKDIEPIMQSIRRIMQQQGYSDGDPLAA 1909
Query: 324 DDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYRKCM 145
+DQL+VL+NVF +HPDK KMG G+DYVM +KHSSFQ+SRCFY+V DG+ +DFSYRKC+
Sbjct: 1910 EDQLFVLENVFEHHPDKETKMGAGIDYVMVNKHSSFQESRCFYVVCKDGQSKDFSYRKCL 1969
Query: 144 ENFVKETYPGMVQSFNAKYLRKPPHSG 64
N++ + YP + +SF KY RKP G
Sbjct: 1970 ANYISKKYPDLAESFLGKYFRKPRARG 1996
>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
DCL [Medicago truncatula]
Length = 481
Score = 209 bits (533), Expect = 2e-51
Identities = 141/400 (35%), Positives = 193/400 (48%), Gaps = 22/400 (5%)
Frame = -1
Query: 1209 SGRSREW---KVDQHSDLENTATRSGWGTDNFQTQASPSTKPSPRSGGWNTQKRSSQTEP 1039
SG + W K + H E+T + W + ++ S K S +S W K S
Sbjct: 37 SGGWKAWGSSKPEVHEG-ESTKVQDSWNSQKWKAAEDVSQKDSQKSSAWGATKPKSNDNR 95
Query: 1038 CGPWGKQADANIWEKSQNPICQSGPCDAWGQSSEQVDTTGWNKNDGKVQLGQWRESHVSH 859
WG++ D E P S +AW Q E V + K V++
Sbjct: 96 SS-WGQKKD----EIHVMPE-DSSRSNAWEQKPENVKDSWVAKVP------------VAN 137
Query: 858 STKPLEESPSSRGWNIKESQK----LPSSQAELSDVWGKRAEEADTTDWNKQKQLQIQPN 691
S+ +SP +R W+ K P+SQ ++ W + E + W K K + QP
Sbjct: 138 SSWGKAKSPENRPWDSKNEPNNSFGKPNSQE--NEPWDSKNES--DSSWGKPKSQESQPW 193
Query: 690 DWSENEGQNQWDQQKEFHVRSHAWDTNVTREQVKKPTGSLAWDSSNAG---------DWX 538
D S+NE + W + K +H WD+ + + + GS WDS A W
Sbjct: 194 D-SKNESNSSWGKPKS--QENHPWDS---KNESNQTAGSRGWDSQVASANSESDKSFQWG 247
Query: 537 XXXXXXXXXXXXXLDHQT-----DW-NKSGIFTATKQRLDQFTSEEQSILADVEPIMLSI 376
DW N+S QR + +T EEQ I+ D+EPI+ SI
Sbjct: 248 KQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSI 307
Query: 375 KRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFY 196
+RIMQ YND DPL+ +DQ YVL+NVF +HPDK KMG GVD+VM SKHS+FQDSRC Y
Sbjct: 308 RRIMQLQGYNDGDPLANEDQKYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLY 367
Query: 195 IVSMDGRREDFSYRKCMENFVKETYPGMVQSFNAKYLRKP 76
+V DG++EDFSYRKC+EN V++ YP +SF KY RKP
Sbjct: 368 VVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKP 407
>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
Length = 2113
Score = 209 bits (531), Expect = 3e-51
Identities = 136/399 (34%), Positives = 188/399 (47%), Gaps = 6/399 (1%)
Frame = -1
Query: 1215 AKSGRSREWKVDQHSDLENTATRSGWGTDNFQTQASPSTKPSPRSGGWNTQKRSSQTEPC 1036
A+ G W H T +S WG D + PS K S G W++ ++Q E
Sbjct: 1721 AQKGEQSTWG---HVKTSQTQNKSTWGGDTAPIENVPSPK-SQEDGLWSSAS-AAQKEQD 1775
Query: 1035 GPWGKQADANIWEKSQNPICQSGPCDAWGQSSEQVDTTGWNKNDGKVQLGQ--WRESHVS 862
G D N W+ S P WG SS+ W K D + G ES S
Sbjct: 1776 G----SKDNNPWQTKVAEQANSEPLSTWGSSSD------WVKPDSQTPTGDNTKNESPWS 1825
Query: 861 HSTKPLEESPSSRGWNIKESQKLPSSQAELSDVWGKRAEEADTTDWNKQKQLQIQPNDWS 682
S K L +S S+GW + + DT + N + QP W
Sbjct: 1826 SSQKLLNDSTDSQGWG---------------------SSKVDTANDNDE-----QPQ-WG 1858
Query: 681 ENEGQNQWDQQKEFHVRSHAWDTNVTR----EQVKKPTGSLAWDSSNAGDWXXXXXXXXX 514
G+ R W V R Q + PT W + +G
Sbjct: 1859 RGRGRG----------RGRGWGRGVGRGREGSQGRGPTNDRDWKNKRSGG---------- 1898
Query: 513 XXXXXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYNDDDP 334
D N GIFTA++QRLD FT+EEQ +L + E IM +I+R+M Q+ YND DP
Sbjct: 1899 -------PVDDPNAPGIFTASRQRLDSFTAEEQEVLLETETIMKNIRRVMHQTGYNDGDP 1951
Query: 333 LSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDFSYR 154
LS DDQ Y++DNV +HP+K++K+G G+D++M +KHS FQ SRC Y V++DG + DFSYR
Sbjct: 1952 LSADDQKYIVDNVLNHHPEKSLKIGAGLDHIMVNKHSEFQMSRCLYAVTIDGSKADFSYR 2011
Query: 153 KCMENFVKETYPGMVQSFNAKYLRKPPHSGGGKRFSENR 37
KC++NF++ YP + +SF AKY +KP G S++R
Sbjct: 2012 KCLDNFIRGKYPDVAESFIAKYFKKPQPRTGWNNNSKDR 2050
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 206 bits (525), Expect = 1e-50
Identities = 141/459 (30%), Positives = 211/459 (45%), Gaps = 53/459 (11%)
Frame = -1
Query: 1263 NENTSESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGWGTDNFQTQASPSTKPSPR 1084
++N+S + + ++ + +G S+E + H+ GW ++N + A S S
Sbjct: 1597 SDNSSHAKGWNSENISSGAGWSKEDSDNSHA--------KGWNSENISSGAGWSKAGSDN 1648
Query: 1083 SG--GWNTQKRSSQTEPCGPWGKQADANIWEKSQNPICQSGPCDAWGQSSEQVDTTGWNK 910
S GWN++ SS W K N KS + W +S++ T K
Sbjct: 1649 SHAKGWNSENISSGAR----WSKADSDNTHAKSTD----------WNTTSDRTKTM--TK 1692
Query: 909 NDGKVQLGQWRESHVSHSTKPLEESPSSRGWN---------------IKESQKLPSSQAE 775
N G+ E STK ++ P + W + + Q LP +E
Sbjct: 1693 NTWSGWHGEKSEKEDILSTKSQQDLPRNSDWGAVSNRENNAERAYEFVSKDQPLPDQVSE 1752
Query: 774 LSDVWGKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFHVRSHAWDTNVTRE- 598
D K + + W L W+++ ++ + + V ++W+ + E
Sbjct: 1753 PCDWDNKLTPQKAVSGW-----LSSNDEGWTKDANSSERKEPTDSPVVYNSWEKRTSSEI 1807
Query: 597 --------------------QVKKP------TGSL---------AWDSSNAGDWXXXXXX 523
+V+KP +GS W S++GDW
Sbjct: 1808 SQNVESASFNSWLPRAGDGGEVEKPNEWVKKSGSFKKNHGETSGGW-GSDSGDWKIKKNH 1866
Query: 522 XXXXXXXXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRYND 343
D+ + +FT T+QRLD FTSEEQ L+ +EP M SI+RIM +S YND
Sbjct: 1867 PGKFPRMNNDNTS----VRLFTETRQRLDLFTSEEQDALSLIEPTMKSIRRIMHKSGYND 1922
Query: 342 DDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRREDF 163
DP+ P+DQ +++DNVF YHPDKA KMG+G+D++M S+HSSFQDSRC Y+VS DGR+EDF
Sbjct: 1923 GDPIRPEDQSFIIDNVFNYHPDKAAKMGSGIDHLMISRHSSFQDSRCLYVVSTDGRKEDF 1982
Query: 162 SYRKCMENFVKETYPGMVQSFNAKYLRKPPHSGGGKRFS 46
SYRKC+ N +K +P + F KY RKP G R S
Sbjct: 1983 SYRKCLGNLIKSRFPDVADEFLDKYFRKPKPGGNQDRIS 2021
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 202 bits (515), Expect = 2e-49
Identities = 127/396 (32%), Positives = 195/396 (49%), Gaps = 38/396 (9%)
Frame = -1
Query: 1152 TRSGWGTDNFQTQASPSTKPSPR----SGGWNTQKRSSQTEPCGPWGKQADANIWEKSQN 985
T S W T+ + A+ + +P + W T R+++ + CG Q D+ ++
Sbjct: 1438 TSSAWATNTAREDAASAWGTNPAKENSTSTWGTT-RANENDWCGREVGQDDSASLSVKKS 1496
Query: 984 PICQSGPCDAWGQSSEQVDT-TGWNKNDGKVQL-----------GQWRESHVSHSTKPLE 841
+ + AW ++ + D + W K+ K W V H
Sbjct: 1497 SVLDTS--SAWATNTAREDAASAWGKHPAKENTTSTWGTTTASENDWCGRGVGHDDSASL 1554
Query: 840 ESPSSRGWNIKESQKLPSSQAELSDVWGKRAEEADTT-----------DWNKQKQLQIQP 694
S N +++ + + WGK + +TT DW ++ +++P
Sbjct: 1555 SGKKSSVLNTSSVWATNTAREDATSAWGKNPAKENTTSTWGTTTASENDWCGREAGKVEP 1614
Query: 693 NDWSENEGQNQ------WDQQK---EFHVRSHAWDTNVTREQVKKPT--GSLAWDSSNAG 547
D + Q+ WD R+H W + +Q KK G+ W SS G
Sbjct: 1615 VDLQPTKPQDDSASLSGWDSPTGDGNSGERNHQWGQH-RGDQTKKNRFEGARNWVSS-PG 1672
Query: 546 DWXXXXXXXXXXXXXXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIMLSIKRI 367
+W D+ T ++T T+QRLD FTSEEQ +L+++EP+M S++RI
Sbjct: 1673 EWKNKNRPPKSPGMVN-DNST---MGALYTVTRQRLDMFTSEEQDVLSNIEPVMRSLRRI 1728
Query: 366 MQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVS 187
M QS YND DPLS DDQ +VLDNVF YHPDKA KMG G+D++ ++H SFQDSRCF++VS
Sbjct: 1729 MHQSGYNDGDPLSGDDQSFVLDNVFNYHPDKAAKMGCGIDHLTVNRHGSFQDSRCFFVVS 1788
Query: 186 MDGRREDFSYRKCMENFVKETYPGMVQSFNAKYLRK 79
DGR EDFSYRKC++N+++E +P + ++F KY +
Sbjct: 1789 TDGRTEDFSYRKCLDNYIREKFPDLAETFIGKYFSR 1824
Score = 67.4 bits (163), Expect = 1e-08
Identities = 69/277 (24%), Positives = 104/277 (37%), Gaps = 10/277 (3%)
Frame = -1
Query: 1341 SISPEQDTGYGRPIFDESLEQDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQH-SDL 1165
S SPE ++ + RP+F++ +E D + + +SNWE +SS S ++W VD++ +
Sbjct: 1294 SFSPELNSSFDRPVFEDLVEFDD-KLGDLPEKSNWEKDSSFHTDSNGGKDWSVDKNVGTV 1352
Query: 1164 ENTATRSGWGTDNFQTQASPSTKPSPRSGGWNTQKRSSQTEPCGPWGKQADANIWEKSQN 985
S WGT+ +TQ S S + S K+SS + WGK N
Sbjct: 1353 AVPDVWSSWGTEKGKTQDSNSAEAQLDS------KKSSVLDTSSAWGK-----------N 1395
Query: 984 PICQSGPCDAWGQSSEQVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKE 805
P + WG TT ++ND W V S N
Sbjct: 1396 P-AKENTTSTWG-------TTTASEND-------WCGRGVGEDDSATLSGKKSGVLNTSS 1440
Query: 804 SQKLPSSQAELSDVWGKR-AEEADTTDWNKQKQLQIQPNDWSENE-GQNQWDQQKEFHVR 631
+ +++ + + WG A+E T+ W + NDW E GQ D V+
Sbjct: 1441 AWATNTAREDAASAWGTNPAKENSTSTWGTTR---ANENDWCGREVGQ---DDSASLSVK 1494
Query: 630 -------SHAWDTNVTREQVKKPTGSLAWDSSNAGDW 541
S AW TN RE G + W
Sbjct: 1495 KSSVLDTSSAWATNTAREDAASAWGKHPAKENTTSTW 1531
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 201 bits (511), Expect = 6e-49
Identities = 136/450 (30%), Positives = 208/450 (46%), Gaps = 30/450 (6%)
Frame = -1
Query: 1338 ISPEQDT--GYGRPIFDESLEQDKTRDNENTSESNWEINSSLVAKSGRSREW-KVDQHSD 1168
+S +Q T +G+P + + +NEN SN+ + G + W + S+
Sbjct: 1467 VSEKQGTLSSWGQP-----RDSSQKNNNENGVSSNFN-------RQGAGKSWDSKKKESN 1514
Query: 1167 LENTATRSGWGT--DNFQTQASPSTKPSPRSGGWNTQKRSSQTEPCGPWGKQADANIWEK 994
++++ + G T D+ + ++S S SGGW+T K + WG Q + K
Sbjct: 1515 VQSSWAQQGDSTWKDSKEARSSVKANNSTNSGGWSTGK-ALVDGVSSSWGSQKEDRPQPK 1573
Query: 993 SQNPICQSGPCD----------------------AWGQSSEQVDTTGWNKNDGKVQLGQW 880
S + G D +WGQ SE +KN + W
Sbjct: 1574 SNDRSVGDGNFDKDAKEEGLSSWDAKKVERKTQSSWGQPSE-------SKNSAQSSADHW 1626
Query: 879 RESHVSHSTKPLEESPSSRGWNIKESQKLPSSQAELSDVWGKRAEEADTTDWNKQKQLQI 700
+ K S GW +++ +E D WGK ++ + W K+ ++
Sbjct: 1627 GSDKSNQPGK-------SSGWGSEDTNA--GKDSEKQDSWGK----SNVSTWKKESGEKL 1673
Query: 699 QPNDWSENEGQNQWDQQKEFHVRSHAWDTNVTREQVKKPTGSLAWDSSNAGDWXXXXXXX 520
+D + Q+ W Q W+ K+P G W SSN G+W
Sbjct: 1674 HGSD----DSQSPWGQPG-----GSGWNK-------KQPEGGRGWGSSNTGEWKSRKNQN 1717
Query: 519 XXXXXXXLDHQTDWNKSG---IFTATKQRLDQFTSEEQSILADVEPIMLSIKRIMQQSRY 349
N TAT++R+D+F +EE+ +L++VE +M SI+RIM QS
Sbjct: 1718 QNQNQNQNRPPRGPNDDSPRVALTATRKRMDEFPTEEKDVLSEVESLMQSIRRIMHQSGC 1777
Query: 348 NDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSRCFYIVSMDGRRE 169
D +PL PDDQ Y++DN+ YHPDKA K+G GVD++ KHS+FQ+SRCFY+VS DG+
Sbjct: 1778 VDGEPLLPDDQTYLIDNILNYHPDKAAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDT 1837
Query: 168 DFSYRKCMENFVKETYPGMVQSFNAKYLRK 79
DFSY KC+E FVK YP + +SF +KY R+
Sbjct: 1838 DFSYIKCIETFVKGKYPSVAESFTSKYFRR 1867
Score = 75.5 bits (184), Expect = 5e-11
Identities = 84/330 (25%), Positives = 125/330 (37%), Gaps = 68/330 (20%)
Frame = -1
Query: 1341 SISPEQDTGYGRPIFDESLEQDKTRDNENTSESNWE-------------INSSLVAKSGR 1201
++SPEQ+ + +F+E+LE D ES+W+ I++ + G
Sbjct: 1082 ALSPEQEN---KAVFEETLEIGVDSDITGADESSWDAFPSSGTGWNANKIDTGSGSAEGG 1138
Query: 1200 SREW--KVDQHSDLENTATRSGWGTDNFQTQASPSTKPSPRSGGWNTQKR---SSQTEPC 1036
W K DQ ++ E+++ GW + ++ P + S +SGGW+ K S+Q +P
Sbjct: 1139 WSSWGSKKDQ-ANPEDSSKTGGWSSGG--SKQKPQPEDSSKSGGWDASKSWGGSNQGDPS 1195
Query: 1035 GPWGK-----------------QADANIW---------EKSQNPICQSG----------- 967
WG+ A+ W K +N G
Sbjct: 1196 PVWGQPVKATNDISIENDHGSGSAEGGGWANSGMKKDLSKQENSSTAGGWDASKSWSGSK 1255
Query: 966 ---PCDAWGQSSEQVDTTGWNKNDGKVQL--GQWRESHVS--HSTKPL---EESPSSRGW 817
P AWG + D GW K+D K L G + S K L E+S GW
Sbjct: 1256 PKDPSSAWGAGKKTDDNNGWKKSDSKKDLASGSVEDGGCSGWGPKKDLLQPEDSAGENGW 1315
Query: 816 NIKESQKLPSSQAELSDVWGKRAEEADTTDWNKQKQLQIQPNDWSEN-EGQNQWDQ--QK 646
+S+ E S WGK A+E D W K P SEN EG + W+ QK
Sbjct: 1316 GASKSK-----SKEPSSAWGKPAQETDNIGWKKN-----NPQRDSENLEGTSGWNDKLQK 1365
Query: 645 EFHVRSHAWDTNVTREQVKKPTGSLAWDSS 556
E N + + +P S WDS+
Sbjct: 1366 E----------NKSFSKQSQPASSKDWDST 1385
>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
NRPD1b [Arabidopsis lyrata subsp. lyrata]
Length = 1947
Score = 190 bits (482), Expect = 1e-45
Identities = 123/415 (29%), Positives = 195/415 (46%), Gaps = 2/415 (0%)
Frame = -1
Query: 1278 DKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGWGTDNFQTQASPST 1099
+K + + W SS KSG + W ++E + + WG+ Q++ P T
Sbjct: 1485 NKKSSKTESDGATW--GSSDKTKSGAAA-WSSWDKKNMETDSEPAAWGS---QSKNKPET 1538
Query: 1098 KPSPRS-GGWNTQKRSSQTEPCGPWGKQADANIWEKSQNPICQSGPCDAWGQSSEQVDTT 922
+ P + G W+T+K +++ P G WG I +K +N +SGP ++ +T
Sbjct: 1539 ESGPSTWGAWDTKKSETESGPAG-WG------IVDK-KNSETESGPAAMGNWDKKKSNTE 1590
Query: 921 GWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLPSSQAELSDVWGKRAEE 742
G W S ++S E + W ++ K S + WG +
Sbjct: 1591 SGPAAWGSTDAAVWGFSDKNNS----ETESDAAAWGSRD--KKTSETESGAAAWGSWGQP 1644
Query: 741 ADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFHVRSHAWDTNVT-REQVKKPTGSLAW 565
T N+ + + +N W KE R + KK S W
Sbjct: 1645 TPTA-----------ANEDANEDDENPWVSLKETKSRDKDDKERIQWGNPAKKFPSSGGW 1693
Query: 564 DSSNAGDWXXXXXXXXXXXXXXLDHQTDWNKSGIFTATKQRLDQFTSEEQSILADVEPIM 385
+ DW +++ N + +FTAT+QRLD FTSEEQ +L+DVEP+M
Sbjct: 1694 SNGGGADWKGKRNHTPRPP------RSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVM 1747
Query: 384 LSIKRIMQQSRYNDDDPLSPDDQLYVLDNVFTYHPDKAVKMGTGVDYVMFSKHSSFQDSR 205
++++IM S Y D DP+S DD+ +VL+ + +HP K K+G+GVD++ KH+ F DSR
Sbjct: 1748 RTLRKIMHPSAYPDGDPISDDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSR 1807
Query: 204 CFYIVSMDGRREDFSYRKCMENFVKETYPGMVQSFNAKYLRKPPHSGGGKRFSEN 40
CF++VS DG ++DFSYRK + N++ YP + F KY KP SG R +++
Sbjct: 1808 CFFVVSTDGAKQDFSYRKSLNNYLMMKYPDRAEEFIDKYFTKPRPSGNRDRNNQD 1862
Score = 62.8 bits (151), Expect = 3e-07
Identities = 71/289 (24%), Positives = 109/289 (37%), Gaps = 27/289 (9%)
Frame = -1
Query: 1335 SPEQDTGYGRPIFDESLEQDKTRDNENTSESNWEINSSLVAKSGRSREWKVDQHSDLENT 1156
SPE+D+ G P F++S E D SESNWE +SS EW V +++ E
Sbjct: 1281 SPERDSALGEPKFEDSAEFQNLHDEGKPSESNWEKSSSWDNGCSGGSEWGVSKNTGGEAN 1340
Query: 1155 ATRSGWGTDNFQTQASPSTKPSPRSGGWNTQK---RSSQTEPCGPWG---KQADANI--- 1003
+ T N + + + S+ WNT+K SS+++ WG K DA+
Sbjct: 1341 PESNWEKTTNVEKEDAWSS--------WNTKKDAQESSKSDSGVAWGLKTKDDDADTTPN 1392
Query: 1002 WE------KSQNPICQSGPCDAWGQSSEQVDTTGWNKNDGKVQL--GQWRESHV----SH 859
WE S P D WG S W+K +G + W + S
Sbjct: 1393 WETRPAQTDSIVPENNEPTSDVWGHKSG--SDKSWDKKNGGTESAPAAWGSTDAAVWGSS 1450
Query: 858 STKPLEESPSSRGWNIKESQKLP-SSQAELSDVWGKRAE--EADTTDWNKQKQLQIQPND 688
K E + W ++ + S A + W K++ E+D W + +
Sbjct: 1451 DKKNSETESDAAAWGSRDKKNSEVGSGAGVLGPWNKKSSKTESDGATWGSSDKTKSGAAA 1510
Query: 687 WSENEGQNQWDQQK-EFHVRSHAWDTNVTR--EQVKKPTGSLAWDSSNA 550
WS WD++ E AW + E P+ AWD+ +
Sbjct: 1511 WS------SWDKKNMETDSEPAAWGSQSKNKPETESGPSTWGAWDTKKS 1553