BLASTX nr result

ID: Akebia22_contig00010433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00010433
         (430 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A...    59   7e-07
gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus nota...    58   1e-06
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   4e-06
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]    56   4e-06

>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
           gi|548843569|gb|ERN03223.1| hypothetical protein
           AMTR_s00003p00168720 [Amborella trichopoda]
          Length = 768

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 44/102 (43%), Positives = 48/102 (47%), Gaps = 22/102 (21%)
 Frame = -3

Query: 329 MASIVGVSSLYQMPSIEXXXXXXXXXXXXXS-------EKPQFVGFGF------------ 207
           MASI+GVSSLYQ  S+E             S       EKPQF                 
Sbjct: 1   MASIIGVSSLYQTLSLELSRRASSQLPSLSSAPSYSSSEKPQFRSLSSPKPLNKSFEASC 60

Query: 206 ---GVSSCPLRSYRSSPSAAIATPNSVLSEEAFKGLGGFSKG 90
              G SS     ++     AIATPNSVLSEEAFKGLGG SKG
Sbjct: 61  SLNGDSSAKRHGFKGLIPCAIATPNSVLSEEAFKGLGGLSKG 102


>gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
          Length = 810

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
 Frame = -3

Query: 329 MASIVGVSSLYQMPSIEXXXXXXXXXXXXXS----EKPQFVGFGFGVSSCPLRSYRSSPS 162
           MASI+GVSS+YQ PS+E             S    +K  F        +C   S     +
Sbjct: 1   MASIIGVSSIYQTPSLEPYRRVAAATSSPSSLPFPDKSHFNSV-LRAYNCKSGSSSRLVA 59

Query: 161 AAIATPNSVLSEEAFKGLGGFSKGS 87
           +AIATPNSVLSEEAFKGLG FSK S
Sbjct: 60  SAIATPNSVLSEEAFKGLGDFSKDS 84


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
           protein product [Vitis vinifera]
          Length = 764

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
 Frame = -3

Query: 326 ASIVGVSSLYQMPSIEXXXXXXXXXXXXXSEKPQFVGFGFGVSSCPL------RSYRSSP 165
           +SI+GVSS+YQ  ++E                   +G     ++  L      RS++   
Sbjct: 3   SSIIGVSSVYQTTALELSRRTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRSFKQGI 62

Query: 164 S---AAIATPNSVLSEEAFKGLGGFSKGSLDI 78
           S   +AIATPNSVLSEEAFKGLGGFSK  LD+
Sbjct: 63  SFVPSAIATPNSVLSEEAFKGLGGFSKDPLDV 94


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
 Frame = -3

Query: 326 ASIVGVSSLYQMPSIEXXXXXXXXXXXXXSEKPQFVGFGFGVSSCPL------RSYRSSP 165
           +SI+GVSS+YQ  ++E                   +G     ++  L      RS++   
Sbjct: 3   SSIIGVSSVYQTTALELSRRTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRSFKQGI 62

Query: 164 S---AAIATPNSVLSEEAFKGLGGFSKGSLDI 78
           S   +AIATPNSVLSEEAFKGLGGFSK  LD+
Sbjct: 63  SFVPSAIATPNSVLSEEAFKGLGGFSKDPLDV 94


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