BLASTX nr result

ID: Aconitum23_contig00042975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00042975
         (370 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008350747.1| PREDICTED: uncharacterized protein LOC103414...    54   4e-07
ref|XP_008360144.1| PREDICTED: putative ribonuclease H protein A...    54   2e-06

>ref|XP_008350747.1| PREDICTED: uncharacterized protein LOC103414113 [Malus domestica]
          Length = 2297

 Score = 54.3 bits (129), Expect(2) = 4e-07
 Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -3

Query: 365  RWRRWIQTCISIVQFSVNIMGIQRDTSKASGGPVSG*FL--FLFTLIVEVLGHVKHKPDE 192
            RWR+W+Q C+S   FSV I G  R   +AS G   G  L  FLFTL+V+VL  +  K  E
Sbjct: 1154 RWRKWMQGCLSSANFSVLINGRPRGKFQASRGLRQGDPLSPFLFTLVVDVLSRLMEKAQE 1213

Query: 191  SKLVRG 174
            + L++G
Sbjct: 1214 NHLIKG 1219



 Score = 26.2 bits (56), Expect(2) = 4e-07
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 130  IIHLQIAGATLFLLEDDSGCLNFLWE 53
            I HLQ A  T+F L +D G  N L E
Sbjct: 1229 IXHLQFADDTIFFLAEDEGGWNNLLE 1254


>ref|XP_008360144.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 746

 Score = 54.3 bits (129), Expect(2) = 2e-06
 Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -3

Query: 365 RWRRWIQTCISIVQFSVNIMGIQRDTSKASGGPVSG*FL--FLFTLIVEVLGHVKHKPDE 192
           RWR+W+Q C+S   FSV I G  R   +AS G   G  L  FLFTL+V+VL  +  K  E
Sbjct: 131 RWRKWMQGCLSSANFSVLINGRPRGKFQASRGLRQGDPLSPFLFTLVVDVLSRLMEKAQE 190

Query: 191 SKLVRG 174
           + L++G
Sbjct: 191 NHLIKG 196



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 130 IIHLQIAGATLFLLEDDSGCLNFLWE 53
           I HLQ A  T+F L  + G  N L E
Sbjct: 206 ISHLQFADDTIFFLAXBEGGWNNLLE 231


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