BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00042603
         (500 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008344150.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   262   6e-68
gb|KHF97527.1| hypothetical protein F383_12018 [Gossypium arboreum]   254   1e-65
ref|XP_010252151.1| PREDICTED: pentatricopeptide repeat-containi...   252   7e-65
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              251   1e-64
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   251   1e-64
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   251   1e-64
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam...   249   6e-64
ref|XP_010103831.1| hypothetical protein L484_024133 [Morus nota...   247   3e-63
ref|XP_008232397.1| PREDICTED: pentatricopeptide repeat-containi...   247   3e-63
ref|XP_010052040.1| PREDICTED: pentatricopeptide repeat-containi...   245   1e-62
ref|XP_011470532.1| PREDICTED: pentatricopeptide repeat-containi...   244   2e-62
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   244   2e-62
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   243   3e-62
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   243   3e-62
ref|XP_011042452.1| PREDICTED: pentatricopeptide repeat-containi...   243   4e-62
ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, part...   243   4e-62
ref|XP_012475332.1| PREDICTED: pentatricopeptide repeat-containi...   242   9e-62
gb|KJB24854.1| hypothetical protein B456_004G164900 [Gossypium r...   242   9e-62
ref|XP_008444214.1| PREDICTED: pentatricopeptide repeat-containi...   241   2e-61
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   227   3e-57

>ref|XP_008344150.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic [Malus domestica]
          Length = 1210

 Score =  262 bits (670), Expect = 6e-68
 Identities = 121/166 (72%), Positives = 148/166 (89%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+KD+L+G + GGEF PDTCTFNTLM++HCNA  LD+AL+VF +M+EL V PDSA+YS+
Sbjct: 360 DKIKDILEGTMSGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSV 419

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIRSL Q+G+  RAEELFD+LS+KEILL D+GC P+VA+YNPIFEYLC+KGK KKAE VF
Sbjct: 420 LIRSLCQRGDYSRAEELFDELSKKEILLSDDGCKPLVASYNPIFEYLCSKGKIKKAEAVF 479

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPDV 2
           RQL++RGTQDP ++KTLIMGHCKEGTFE G++LLV MLRR+FVPDV
Sbjct: 480 RQLMRRGTQDPVSYKTLIMGHCKEGTFETGYELLVWMLRRDFVPDV 525



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
 Frame = -2

Query: 490 KDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIR 311
           K+V   MV      PDTCTFNTL+   C    +D+  + F  M+     PD  +Y+ L+ 
Sbjct: 220 KNVYDEMVSMYGATPDTCTFNTLIRGFCMNSMVDEGFRFFKEMSRFKCDPDVITYNTLVD 279

Query: 310 SLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQL 131
            L + G++  A  +   +S++   L      P +  Y  +    C K +  +A  V  ++
Sbjct: 280 GLCRAGKVGIAHNVVKGMSKRSADL-----NPNIVTYTTLIRGYCMKQEIDEALCVLEEM 334

Query: 130 LKRGTQ-DPPAFKTLIMGHCKEGTFEAGFDLLV-LMLRRNFVPD 5
             +G + +     TLI G C+    +   D+L   M    F PD
Sbjct: 335 TSQGLKPNGITCNTLIKGLCEAHKLDKIKDILEGTMSGGEFTPD 378


>gb|KHF97527.1| hypothetical protein F383_12018 [Gossypium arboreum]
          Length = 741

 Score =  254 bits (650), Expect = 1e-65
 Identities = 117/164 (71%), Positives = 144/164 (87%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L+GM + G F PDTCTFNTL+NAHCNA  +D+AL VF RM+E+ VQ DSA+YS+
Sbjct: 355 DKIKEILEGMRKDGRFTPDTCTFNTLINAHCNAGNMDEALNVFKRMSEMKVQSDSATYSV 414

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           +IRSL Q  + ++AEE FD+L++KEILLG  GCTP+VAAYNP+FEYLCA GKTKKAE+VF
Sbjct: 415 IIRSLCQIADFEKAEEFFDELAKKEILLGHVGCTPVVAAYNPMFEYLCANGKTKKAERVF 474

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVP 8
           RQLLKRG QDPPA+KTLI+GHCKEGTFEAG++LLVLMLRR+F P
Sbjct: 475 RQLLKRGRQDPPAYKTLILGHCKEGTFEAGYELLVLMLRRDFEP 518


>ref|XP_010252151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Nelumbo nucifera]
          Length = 680

 Score =  252 bits (644), Expect = 7e-65
 Identities = 114/166 (68%), Positives = 146/166 (87%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK++++L+G+  GGEF PDTCTFNTLM+AHCNA +L++AL VF +M+ L VQPDSA+YS+
Sbjct: 305 DKIREILEGVTEGGEFVPDTCTFNTLMSAHCNAGKLEEALHVFEKMSNLRVQPDSATYSV 364

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIRSL Q+G+  +AEELFDDL + EIL+ + GC P+VAAYNP+FE+LC  G+T+KA+KVF
Sbjct: 365 LIRSLCQRGDFMKAEELFDDLWKNEILVKEVGCVPLVAAYNPMFEFLCGNGRTEKADKVF 424

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPDV 2
           RQ+LKRGTQDPPAFK LI+GHCKEGT +AG+DLLVLMLRR+FVPD+
Sbjct: 425 RQMLKRGTQDPPAFKILILGHCKEGTVQAGYDLLVLMLRRDFVPDM 470



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PD  TFN L+   C    +DD  + F  M+  G  PD  +Y+ L+  L + G+++ A  L
Sbjct: 179 PDVYTFNILIRGFCLNSMVDDGFRFFKEMSRFGCNPDVVTYNTLVDGLCRTGKVRIAHNL 238

Query: 268 FDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQ-DPPAFKT 92
            + +  K          P V  Y  +    C K    +A  VF+++L RG + +   + T
Sbjct: 239 LNGMCTK-----SSDLNPNVVTYTTLIRGYCEKQDIAQALDVFKEMLGRGMKPNGITYNT 293

Query: 91  LIMGHCKEGTFEAGFDLLVLMLR-RNFVPD 5
           LI G C+ G  +   ++L  +     FVPD
Sbjct: 294 LIQGLCEAGKLDKIREILEGVTEGGEFVPD 323



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 32/175 (18%)
 Frame = -2

Query: 433 FNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEELFDDLS 254
           FN+L+ ++  A  + ++L+V+M M  LGV P   +++ L   L ++G    A++L+D++ 
Sbjct: 113 FNSLIRSYGQAGLIQESLKVYMTMKSLGVSPSVVTFNSLFSILLRRGRKTMAKKLYDEMI 172

Query: 253 EKEILLGDE-----------------------------GCTPIVAAYNPIFEYLCAKGKT 161
               +  D                              GC P V  YN + + LC  GK 
Sbjct: 173 TTVGVCPDVYTFNILIRGFCLNSMVDDGFRFFKEMSRFGCNPDVVTYNTLVDGLCRTGKV 232

Query: 160 KKAEKVFRQLLKRGTQDPP---AFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           + A  +   +  + +   P    + TLI G+C++       D+   ML R   P+
Sbjct: 233 RIAHNLLNGMCTKSSDLNPNVVTYTTLIRGYCEKQDIAQALDVFKEMLGRGMKPN 287


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  251 bits (642), Expect = 1e-64
 Identities = 116/165 (70%), Positives = 144/165 (87%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L+GMV  G F PDTCT NTL+ AHC   +L++A  VF +M+EL VQPDSA+YS+
Sbjct: 360 DKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSV 419

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           L+RSL Q+G+ +RAEE FD+L+EKEILL D GC P+VAAYNP+FEYLC+ GKTKKAE+VF
Sbjct: 420 LVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 479

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL+KRGTQDPP++KTLI+GHC+EGT EAGFDLLVLMLRR+FVPD
Sbjct: 480 RQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 524



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 32/175 (18%)
 Frame = -2

Query: 433 FNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEELFDDLS 254
           FN+L+ ++  A    ++++VF  M E+GV P   +++ L+  + ++G    A++LFD++ 
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 253 EK----------EILLG--------DEG-----------CTPIVAAYNPIFEYLCAKGKT 161
           +            IL+         DEG           C P V  YN + + LC  GK 
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 160 KKAEKVFRQLLKRGTQDPP---AFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           K A  V + ++K+     P    + TLI G+C +        LL  M+ R   P+
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPN 342



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 32/180 (17%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PDT TFN L+   C    +D+    F  M+     PD  +Y+ L+  L + G+++ A  +
Sbjct: 234 PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNV 293

Query: 268 F---------------------------DDLSEKEILLGD---EGCTPIVAAYNPIFEYL 179
                                        D++E   LL +    G  P    YN + + L
Sbjct: 294 VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGL 353

Query: 178 CAKGKTKKAEKVFRQLLKRG--TQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           C   K  K +++   ++  G    D     TLI  HC  G  E  F +   M      PD
Sbjct: 354 CEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 413


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Vitis vinifera]
           gi|731390607|ref|XP_010650422.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Vitis vinifera]
          Length = 746

 Score =  251 bits (642), Expect = 1e-64
 Identities = 116/165 (70%), Positives = 144/165 (87%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L+GMV  G F PDTCT NTL+ AHC   +L++A  VF +M+EL VQPDSA+YS+
Sbjct: 360 DKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSV 419

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           L+RSL Q+G+ +RAEE FD+L+EKEILL D GC P+VAAYNP+FEYLC+ GKTKKAE+VF
Sbjct: 420 LVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 479

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL+KRGTQDPP++KTLI+GHC+EGT EAGFDLLVLMLRR+FVPD
Sbjct: 480 RQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 524



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 32/175 (18%)
 Frame = -2

Query: 433 FNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEELFDDLS 254
           FN+L+ ++  A    ++++VF  M E+GV P   +++ L+  + ++G    A++LFD++ 
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 253 EK----------EILLG--------DEG-----------CTPIVAAYNPIFEYLCAKGKT 161
           +            IL+         DEG           C P V  YN + + LC  GK 
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 160 KKAEKVFRQLLKRGTQDPP---AFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           K A  V + ++K+     P    + TLI G+C +        LL  M+ R   P+
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPN 342



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 32/180 (17%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PDT TFN L+   C    +D+    F  M+     PD  +Y+ L+  L + G+++ A  +
Sbjct: 234 PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNV 293

Query: 268 F---------------------------DDLSEKEILLGD---EGCTPIVAAYNPIFEYL 179
                                        D++E   LL +    G  P    YN + + L
Sbjct: 294 VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGL 353

Query: 178 CAKGKTKKAEKVFRQLLKRG--TQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           C   K  K +++   ++  G    D     TLI  HC  G  E  F +   M      PD
Sbjct: 354 CEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 413


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  251 bits (642), Expect = 1e-64
 Identities = 116/165 (70%), Positives = 144/165 (87%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L+GMV  G F PDTCT NTL+ AHC   +L++A  VF +M+EL VQPDSA+YS+
Sbjct: 431 DKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSV 490

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           L+RSL Q+G+ +RAEE FD+L+EKEILL D GC P+VAAYNP+FEYLC+ GKTKKAE+VF
Sbjct: 491 LVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 550

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL+KRGTQDPP++KTLI+GHC+EGT EAGFDLLVLMLRR+FVPD
Sbjct: 551 RQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 595



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRM-NELGVQPDSASYSILIRSLYQKGEIQRAEE 272
           P   TFN+L++      R   A Q+F  M +  GV PD+ +++ILIR       +     
Sbjct: 269 PSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFW 328

Query: 271 LFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQDPP---A 101
            F ++S  +       C P V  YN + + LC  GK K A  V + ++K+     P    
Sbjct: 329 FFKEMSRFK-------CDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 381

Query: 100 FKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           + TLI G+C +        LL  M+ R   P+
Sbjct: 382 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPN 413



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 32/180 (17%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PDT TFN L+   C    +D+    F  M+     PD  +Y+ L+  L + G+++ A  +
Sbjct: 305 PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNV 364

Query: 268 F---------------------------DDLSEKEILLGD---EGCTPIVAAYNPIFEYL 179
                                        D++E   LL +    G  P    YN + + L
Sbjct: 365 VKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGL 424

Query: 178 CAKGKTKKAEKVFRQLLKRG--TQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           C   K  K +++   ++  G    D     TLI  HC  G  E  F +   M      PD
Sbjct: 425 CEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 484


>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508704486|gb|EOX96382.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 724

 Score =  249 bits (636), Expect = 6e-64
 Identities = 113/164 (68%), Positives = 142/164 (86%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           +K+K++L+GM   G F PDTCT NTL+NAHCNA+ +D+AL VF RM+EL V PDSA+YS+
Sbjct: 355 EKIKEILEGMGEDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRMSELNVLPDSATYSV 414

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           +IRSL Q+G+ ++AEE FD+L+EKEILL D GCTP+VAAYNP+FEYLC  GKTKKAE VF
Sbjct: 415 IIRSLCQRGDFEKAEEFFDELAEKEILLSDVGCTPLVAAYNPMFEYLCGNGKTKKAEIVF 474

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVP 8
           RQL+KRG QDPPA+KTLI+GHC+EGTF+ G++LLVLMLRR+F P
Sbjct: 475 RQLMKRGRQDPPAYKTLILGHCREGTFKDGYELLVLMLRRDFEP 518


>ref|XP_010103831.1| hypothetical protein L484_024133 [Morus notabilis]
           gi|587909359|gb|EXB97272.1| hypothetical protein
           L484_024133 [Morus notabilis]
          Length = 786

 Score =  247 bits (630), Expect = 3e-63
 Identities = 118/165 (71%), Positives = 142/165 (86%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           D V+ +L G +R GEF P+TCTFNTL++ HC A RLD+AL+VF +M EL V  DSA+YS 
Sbjct: 403 DDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSA 462

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIRSL Q+G+  RAEELFD LS+KEILL D+GC PIVAAYNP+FE+LC  GKTKKAE+VF
Sbjct: 463 LIRSLCQRGDYIRAEELFDKLSDKEILLSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVF 522

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL+KRGTQDPP++KTLIMGHC+EGTFEAG++LLVLMLRR+FVPD
Sbjct: 523 RQLMKRGTQDPPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPD 567



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PDT TFN L+   C    +D+    F  M+    +PD  +Y+ L+  L + G++  A  +
Sbjct: 277 PDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNV 336

Query: 268 FDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQ-DPPAFKT 92
              +S+K + L      P +  Y  + +  C K +  +A  V +++ +RG + +   + T
Sbjct: 337 VKGMSKKSVDL-----NPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERGLKPNGITYNT 391

Query: 91  LIMGHCKEGTFEAGFDLLVLMLRR-NFVPD 5
           LI G C+    +    +L   +RR  FVP+
Sbjct: 392 LIKGLCEAQKLDDVRKILDGTMRRGEFVPN 421



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRM-NELGVQPDSASYSILIRSLYQKGEIQRAEE 272
           P   TFN+L+       R + A  VF  M    GV+PD+ ++++LIR       +     
Sbjct: 241 PSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLIRGFCMNSMVDEGFH 300

Query: 271 LFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQDPP---A 101
            F ++S  +       C P V  YN + + LC  GK   A  V + + K+     P    
Sbjct: 301 FFKEMSRFK-------CEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVT 353

Query: 100 FKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           + TLI G+C +   +    +L  M  R   P+
Sbjct: 354 YTTLIKGYCGKQEIDEALLVLKEMTERGLKPN 385


>ref|XP_008232397.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Prunus mume]
          Length = 1150

 Score =  247 bits (630), Expect = 3e-63
 Identities = 115/165 (69%), Positives = 147/165 (89%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L+G + GGEF PDTCTFNTLM++HCNA  LD+AL+VF +M+EL V PDSA+YS+
Sbjct: 362 DKIKEILEGTMIGGEFIPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSV 421

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIRSL Q+G+  RAEELFD+LS+KEILL D+GC P+VA+YNPIF YL + GKT+KAE+VF
Sbjct: 422 LIRSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVF 481

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL++RGTQDP ++KTLIMG+CKEGT+EAG++LLV MLRR+FVPD
Sbjct: 482 RQLMRRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVPD 526



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
 Frame = -2

Query: 490 KDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIR 311
           K+V   M+      PDT TFN L+   C    +D+  + F  M+     PD  +Y+ L+ 
Sbjct: 222 KNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVD 281

Query: 310 SLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQL 131
            L + G+++ A  +   +S++    GD   TP V  Y  +    C K +  KA  +  ++
Sbjct: 282 GLCRAGKVEIAHNVVKGMSKRS---GD--LTPNVVTYTTLIRGYCVKQEIDKALCILEEI 336

Query: 130 LKRGTQ-DPPAFKTLIMGHCKEGTFEAGFDLLV-LMLRRNFVPD 5
             RG + +   + TLI G C+    +   ++L   M+   F+PD
Sbjct: 337 TTRGLKPNGFTYNTLIKGLCEAQKLDKIKEILEGTMIGGEFIPD 380


>ref|XP_010052040.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Eucalyptus grandis]
           gi|629110935|gb|KCW75895.1| hypothetical protein
           EUGRSUZ_D00277 [Eucalyptus grandis]
          Length = 761

 Score =  245 bits (625), Expect = 1e-62
 Identities = 116/167 (69%), Positives = 144/167 (86%), Gaps = 2/167 (1%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGE--FPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASY 326
           DK+K++L+G V  G+  F PD+CT NTLM++HCN+  LD+AL VF +M+EL V PDSASY
Sbjct: 355 DKIKEILEGTVGKGDRVFIPDSCTLNTLMHSHCNSGNLDEALNVFEKMSELQVSPDSASY 414

Query: 325 SILIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEK 146
           S+LIRSL QKGE +RAE LF++LSEK+ILL D GC P+VAAY+P+F YLC  GKTKKAE+
Sbjct: 415 SVLIRSLCQKGEFERAEVLFNELSEKQILLSDAGCVPLVAAYHPMFVYLCKSGKTKKAEE 474

Query: 145 VFRQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           VFRQL+KRG QDPP++KTLI+GHC+EGTFEAG+DLLVLMLRR+FVPD
Sbjct: 475 VFRQLMKRGMQDPPSYKTLIVGHCREGTFEAGYDLLVLMLRRDFVPD 521



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
 Frame = -2

Query: 493 VKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILI 314
           VK V   M+      PDT T+N L+   C    +D+    F  M++   +PD  +Y+ L+
Sbjct: 214 VKHVYDEMLNTYGVTPDTYTYNILIRGFCMNSMVDEGFHFFKEMSQFNCEPDVITYNTLV 273

Query: 313 RSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQ 134
             L + G++  A  +   +  K   L      P V  Y  +    C KG+   A  +  +
Sbjct: 274 DGLCRAGKVNIANNVVKGMRTKSADL-----KPNVITYTTLIRGYCMKGEIDDALAIIEE 328

Query: 133 LLKRGTQ-DPPAFKTLIMGHCKEGTFEAGFDLL---VLMLRRNFVPD 5
           ++  G + +   + TLI G C+    +   ++L   V    R F+PD
Sbjct: 329 MVNGGLKPNKITYNTLIKGLCEARKLDKIKEILEGTVGKGDRVFIPD 375


>ref|XP_011470532.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 1141

 Score =  244 bits (623), Expect = 2e-62
 Identities = 113/166 (68%), Positives = 145/166 (87%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L+G +RG  F PDTCTFNTLM++HC A  L++AL+VF  M+EL V PDSA+YS+
Sbjct: 350 DKIKEILEGAMRGEGFTPDTCTFNTLMHSHCIAGNLEEALKVFRMMSELKVPPDSATYSV 409

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIRS  ++ +  +AEELFD+LS+K+ILL D GCTPIVA+Y PIFEYLC+ G+TKKA++VF
Sbjct: 410 LIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVASYKPIFEYLCSNGRTKKADEVF 469

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPDV 2
           RQLLKRGTQDPP+FKTLIMGHC+EGT+EAG+ L+VLMLRR++VPDV
Sbjct: 470 RQLLKRGTQDPPSFKTLIMGHCREGTYEAGYKLVVLMLRRDYVPDV 515


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  244 bits (623), Expect = 2e-62
 Identities = 114/166 (68%), Positives = 141/166 (84%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K + +G + GG F PDTCT NTLMNAHCNA  L+DAL+VF +M  L V+PDSA+YS+
Sbjct: 351 DKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSV 410

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIR+L Q+G  +RAE+LFD+LSEKEILL D+GCTP+VAAY  +FE+LC  GKT KAE+VF
Sbjct: 411 LIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVF 470

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPDV 2
           RQL+KRGTQDP +FK LI GHC+EGTFEAG++LLVLMLRR+FVPD+
Sbjct: 471 RQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDL 516



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PDT TFN L+   C    +D+  + F  M+     PD  +Y+ L+  L + G++  A  +
Sbjct: 225 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNV 284

Query: 268 FDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQ-DPPAFKT 92
            + + +K   L      P V  Y  +    C K +  +A  VF +++ +G + +   + T
Sbjct: 285 VNGMVKKSTNL-----NPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNT 339

Query: 91  LIMGHCK 71
           LI G C+
Sbjct: 340 LIKGLCE 346



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
 Frame = -2

Query: 433 FNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEELFDDLS 254
           FN+L+ ++  A    +++QVF  M  +GV P   +++ L+  L ++G    A+ +FD++ 
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218

Query: 253 EK----------EILLG--------DEG-----------CTPIVAAYNPIFEYLCAKGKT 161
                        IL+         DEG           C P +  YN + + LC  GK 
Sbjct: 219 STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278

Query: 160 KKAEKVFRQLLKRGTQ---DPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
             A  V   ++K+ T    D   + TL+ G+C +   +    +   M+ +   P+
Sbjct: 279 NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPN 333


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
           gi|550323558|gb|ERP53036.1| hypothetical protein
           POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  243 bits (621), Expect = 3e-62
 Identities = 110/165 (66%), Positives = 143/165 (86%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L G V G  F PDTCT+NTLMNA C+A   D+AL++F +M EL VQPDSA+YS+
Sbjct: 356 DKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSV 415

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIR+L Q+G+ +RAE+LFD LS+++ILL D+GCTP+VAAYNPIF++LC  GKT KAE+VF
Sbjct: 416 LIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVF 475

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL+K+GTQDPP++KTLI+GHCKEGTFEAG+ LL+ MLRR++VPD
Sbjct: 476 RQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPD 520



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
 Frame = -2

Query: 487 DVLKGMVRG-GEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIR 311
           +V+KGMV+   +  PD  T+ TL+  +C    +D+AL VF  M   G++P+  +Y+ LI+
Sbjct: 288 NVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIK 347

Query: 310 SLYQKGEIQRAEELFDDLSEKEIL---LGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
            L    E+Q+ +++      KEIL   +G  G  P    YN +    C  G   +A K+F
Sbjct: 348 GLC---EVQKFDKI------KEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMF 398

Query: 139 RQLLKRGTQ-DPPAFKTLIMGHCKEGTFE 56
           +++ +   Q D   +  LI   C+ G FE
Sbjct: 399 KKMKELKVQPDSATYSVLIRNLCQRGDFE 427



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PDT TFN L+   C    +D+  + F  M+    +PD  +Y+ L+  L + G+++ A  +
Sbjct: 230 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNV 289

Query: 268 FDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQ-DPPAFKT 92
              + +K      +  +P V  Y  +    C K +  +A  VF +++ RG + +   + T
Sbjct: 290 VKGMVKKM-----KDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNT 344

Query: 91  LIMGHCKEGTFEAGFDLL-VLMLRRNFVPD 5
           LI G C+   F+   ++L   +  R FVPD
Sbjct: 345 LIKGLCEVQKFDKIKEILGGAVGGRGFVPD 374



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
 Frame = -2

Query: 481 LKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRM-NELGVQPDSASYSILIRSL 305
           L  +++     P   TFN+L+       R + A  VF  M    GV PD+ +++ILIR  
Sbjct: 183 LFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGF 242

Query: 304 YQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLK 125
            +   +      F ++S          C P V  YN + + LC  GK + A  V + ++K
Sbjct: 243 CKNSMVDEGFRFFKEMSR-------FNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVK 295

Query: 124 RG---TQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           +    + D   + TL+ G+C +   +    +   M+ R   P+
Sbjct: 296 KMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPN 338


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Cucumis sativus]
           gi|778694261|ref|XP_011653773.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Cucumis sativus]
           gi|700199375|gb|KGN54533.1| hypothetical protein
           Csa_4G358710 [Cucumis sativus]
          Length = 757

 Score =  243 bits (621), Expect = 3e-62
 Identities = 111/165 (67%), Positives = 140/165 (84%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           +K+KD+L+G    G F PDTCTFNTLM+ HC+A  LDDAL+VF RM+EL +QPDSA+YS 
Sbjct: 344 EKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSA 403

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           L+RSL Q G  ++AE+L D L E++ILL  +GC P+VAAYNPIF+YLC  GKTKKAEK F
Sbjct: 404 LVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF 463

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL++RGTQDPP++KTLIMGHCKEGTFE+G++LLVLMLR++F+PD
Sbjct: 464 RQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPD 508



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PDT TFN L+   C    +DD  ++F  ++  G +PD  +Y+ L+  L + G++  A  +
Sbjct: 218 PDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNV 277

Query: 268 FDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQ-DPPAFKT 92
              + +K + L      P V  Y  +    CAK + +KA  VF +++ +G + +   + T
Sbjct: 278 VKGMGKKSVDL-----NPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332

Query: 91  LIMGHCKEGTFEAGFDLL 38
           LI G C+   FE   D+L
Sbjct: 333 LIKGLCEARKFEKIKDIL 350



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRM-NELGVQPDSASYSILIRSLYQKGEIQRAEE 272
           P   TFN+L+       R + A +V+  M +  GV PD+ +++ILIR     G +     
Sbjct: 182 PSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFR 241

Query: 271 LFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQDPP---A 101
           +F+DLS         GC P V  YN + + LC  GK   A  V + + K+     P    
Sbjct: 242 IFNDLSR-------FGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVT 294

Query: 100 FKTLIMGHCKEGTFE 56
           + TLI G+C +   E
Sbjct: 295 YTTLIRGYCAKREIE 309



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQ--PDSASYSILIRSLYQKGEIQRAE 275
           PD  T+NTL++  C A ++  A  V   M +  V   P+  +Y+ LIR    K EI++A 
Sbjct: 253 PDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKAL 312

Query: 274 ELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQDPP--A 101
            +F+++        ++G       YN + + LC   K +K + +       GT  P    
Sbjct: 313 AVFEEMV-------NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCT 365

Query: 100 FKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           F TL+  HC  G  +    +   M      PD
Sbjct: 366 FNTLMHCHCHAGNLDDALKVFERMSELKIQPD 397


>ref|XP_011042452.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Populus euphratica]
          Length = 1216

 Score =  243 bits (620), Expect = 4e-62
 Identities = 109/165 (66%), Positives = 143/165 (86%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L G V G  F PDTCT+NTLMN+ C+A   D+AL++F +M EL VQPDSA+YS+
Sbjct: 356 DKIKEILGGAVGGRGFVPDTCTYNTLMNSQCDAGNFDEALKMFKKMKELKVQPDSATYSV 415

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIR+L Q+G+ +RAE+LFD+LS+ +ILL D+GCTP+VAAYNPIF++LC  GKT KAE+VF
Sbjct: 416 LIRNLCQRGDFERAEQLFDELSDDDILLRDDGCTPLVAAYNPIFDFLCKNGKTSKAERVF 475

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL+K+GTQDPP++KTLI+GHCKEGTFEAG+ LL+ MLRR++VPD
Sbjct: 476 RQLMKKGTQDPPSYKTLILGHCKEGTFEAGYKLLLYMLRRDYVPD 520



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 5/149 (3%)
 Frame = -2

Query: 487 DVLKGMVRG-GEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIR 311
           +V+KGMV+   +  PD  T+ TL+  +C    +D+AL VF  M   G++P+  +Y+ LI+
Sbjct: 288 NVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIK 347

Query: 310 SLYQKGEIQRAEELFDDLSEKEIL---LGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
            L    E+Q+ +++      KEIL   +G  G  P    YN +    C  G   +A K+F
Sbjct: 348 GLC---EVQKFDKI------KEILGGAVGGRGFVPDTCTYNTLMNSQCDAGNFDEALKMF 398

Query: 139 RQLLKRGTQ-DPPAFKTLIMGHCKEGTFE 56
           +++ +   Q D   +  LI   C+ G FE
Sbjct: 399 KKMKELKVQPDSATYSVLIRNLCQRGDFE 427



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
 Frame = -2

Query: 448 PDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQRAEEL 269
           PDT TFN L+   C    +D+  + F  M+    +PD  +Y+ L+  L + G+++ A  +
Sbjct: 230 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNV 289

Query: 268 FDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRGTQ-DPPAFKT 92
              + +K      +  +P V  Y  +    C K +  +A  VF +++ RG + +   + T
Sbjct: 290 VKGMVKKM-----KDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNT 344

Query: 91  LIMGHCKEGTFEAGFDLL-VLMLRRNFVPD 5
           LI G C+   F+   ++L   +  R FVPD
Sbjct: 345 LIKGLCEVQKFDKIKEILGGAVGGRGFVPD 374



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
 Frame = -2

Query: 481 LKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRM-NELGVQPDSASYSILIRSL 305
           L  +++     P   TFN+L+       R + A  VF  M    GV PD+ +++ILIR  
Sbjct: 183 LFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGF 242

Query: 304 YQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLK 125
            +   +      F ++S          C P V  YN + + LC  GK + A  V + ++K
Sbjct: 243 CKNSMVDEGFRFFKEMSR-------FNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVK 295

Query: 124 RG---TQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           +    + D   + TL+ G+C +   +    +   M+ R   P+
Sbjct: 296 KMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPN 338


>ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
           gi|462415618|gb|EMJ20355.1| hypothetical protein
           PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  243 bits (620), Expect = 4e-62
 Identities = 113/165 (68%), Positives = 145/165 (87%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++ +G + GGEF PDTCTFNTLM++HCNA  LD+AL+VF +M+EL V PDSA+YS+
Sbjct: 343 DKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSV 402

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LI SL Q+G+  RAEELFD+LS+KEILL D+GC P+VA+YNPIF YL + GKT+KAE+VF
Sbjct: 403 LICSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVF 462

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL++RGTQDP ++KTLIMG+CKEGT+EAG++LLV MLRR+FVPD
Sbjct: 463 RQLMRRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVPD 507



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
 Frame = -2

Query: 490 KDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIR 311
           K+V   M+      PDT TFN L+   C    +D+  + F  M+     PD  +Y+ L+ 
Sbjct: 203 KNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVD 262

Query: 310 SLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQL 131
            L + G+++ A  + + +S++    GD   TP V  Y  +    C K +  KA  +  ++
Sbjct: 263 GLCRAGKVEIAHNVVNGMSKRS---GD--LTPNVVTYTTLIRGYCVKQEIDKALSILEEM 317

Query: 130 LKRGTQ-DPPAFKTLIMGHCKEGTFEAGFDLLV-LMLRRNFVPD 5
             RG + +   + TLI G C+    +   ++    M+   F PD
Sbjct: 318 TTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPD 361


>ref|XP_012475332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Gossypium raimondii]
          Length = 678

 Score =  242 bits (617), Expect = 9e-62
 Identities = 113/164 (68%), Positives = 139/164 (84%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           DK+K++L+ M   G F  DTCTFNTL+NAHCNA  +D+AL V  RM+E+ VQ DSA+YS+
Sbjct: 292 DKIKEILERMGEDGRFTLDTCTFNTLINAHCNAGNMDEALNVLKRMSEMKVQSDSATYSV 351

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           +IRSL Q  + ++AEE FD+L++KEILL   GCTP+VAAYNP+FEYLCA GKTKKAE+VF
Sbjct: 352 IIRSLCQIADFEKAEEFFDELAKKEILLSHVGCTPLVAAYNPMFEYLCANGKTKKAERVF 411

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVP 8
           RQLLKRG QDPPA+KTLI+GHCKEGTFEAG++LLVLMLRR+F P
Sbjct: 412 RQLLKRGRQDPPAYKTLILGHCKEGTFEAGYELLVLMLRRDFEP 455



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
 Frame = -2

Query: 490 KDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIR 311
           K V   M+      PD  TFN L+   C    +D+  + F  M      PD  +Y+ ++ 
Sbjct: 152 KSVFNEMLSTYGVTPDVYTFNILIKGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVD 211

Query: 310 SLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQL 131
            L + G++  A  +   +S+K + L      P V  Y  +    C K    +A  VF+++
Sbjct: 212 GLCRVGKVGIAHNVVKGMSKKSLDL-----NPNVVTYTTLLRGYCMKQDIDEALAVFQEM 266

Query: 130 LKRGTQ-DPPAFKTLIMG 80
           + RG + +   + TLI G
Sbjct: 267 ICRGLKPNKITYNTLIKG 284


>gb|KJB24854.1| hypothetical protein B456_004G164900 [Gossypium raimondii]
          Length = 1615

 Score =  242 bits (617), Expect = 9e-62
 Identities = 113/164 (68%), Positives = 139/164 (84%)
 Frame = -2

Query: 499  DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
            DK+K++L+ M   G F  DTCTFNTL+NAHCNA  +D+AL V  RM+E+ VQ DSA+YS+
Sbjct: 1229 DKIKEILERMGEDGRFTLDTCTFNTLINAHCNAGNMDEALNVLKRMSEMKVQSDSATYSV 1288

Query: 319  LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
            +IRSL Q  + ++AEE FD+L++KEILL   GCTP+VAAYNP+FEYLCA GKTKKAE+VF
Sbjct: 1289 IIRSLCQIADFEKAEEFFDELAKKEILLSHVGCTPLVAAYNPMFEYLCANGKTKKAERVF 1348

Query: 139  RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVP 8
            RQLLKRG QDPPA+KTLI+GHCKEGTFEAG++LLVLMLRR+F P
Sbjct: 1349 RQLLKRGRQDPPAYKTLILGHCKEGTFEAGYELLVLMLRRDFEP 1392



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
 Frame = -2

Query: 490  KDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIR 311
            K V   M+      PD  TFN L+   C    +D+  + F  M      PD  +Y+ ++ 
Sbjct: 1089 KSVFNEMLSTYGVTPDVYTFNILIKGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVD 1148

Query: 310  SLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQL 131
             L + G++  A  +   +S+K + L      P V  Y  +    C K    +A  VF+++
Sbjct: 1149 GLCRVGKVGIAHNVVKGMSKKSLDL-----NPNVVTYTTLLRGYCMKQDIDEALAVFQEM 1203

Query: 130  LKRGTQ-DPPAFKTLIMG 80
            + RG + +   + TLI G
Sbjct: 1204 ICRGLKPNKITYNTLIKG 1221


>ref|XP_008444214.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Cucumis melo]
           gi|659086988|ref|XP_008444216.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic [Cucumis melo]
          Length = 757

 Score =  241 bits (614), Expect = 2e-61
 Identities = 109/165 (66%), Positives = 140/165 (84%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           +K+K++L+     G F PDTCTFNTLM+ HC+A  LDDAL+VF RM+EL +QPDSA+YS+
Sbjct: 344 EKIKEILEATAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSV 403

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           L RSL Q G  ++AE+L D L E++ILL D+ C P+VA+YNPIF+YLC  GKTKKAEKVF
Sbjct: 404 LARSLCQGGHYEKAEDLLDKLLERKILLSDDSCKPLVASYNPIFKYLCENGKTKKAEKVF 463

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
           RQL++RGTQDPP++KTLIMGHCKEGTFE+G++LLVLMLR++F+PD
Sbjct: 464 RQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPD 508



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
 Frame = -2

Query: 490 KDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIR 311
           K+V   M+      PDT TFN L+   C    +DD  ++F  +   G +PD  +Y+ L+ 
Sbjct: 204 KNVYYEMLSTYGVTPDTYTFNILIRGFCMNGMVDDGFRIFNDLPRFGCEPDVVTYNTLVD 263

Query: 310 SLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQL 131
            L + G++  A  L   + +K + L      P V  Y  +    CAK +  KA  VF ++
Sbjct: 264 GLCRAGKVTVAYNLAKGMGKKSVDL-----NPNVVTYTTLIRGYCAKREIDKALAVFEEM 318

Query: 130 LKRGTQ-DPPAFKTLIMGHCKEGTFE 56
           + +G + +   + TLI G C+   FE
Sbjct: 319 VNQGLKANNITYNTLIKGLCEAQKFE 344


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  227 bits (578), Expect = 3e-57
 Identities = 107/166 (64%), Positives = 134/166 (80%)
 Frame = -2

Query: 499 DKVKDVLKGMVRGGEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSI 320
           D++K++L+G +  G   PDTCTFNTL+  HCN   LD+A++VF  M  L V+PDSA+YSI
Sbjct: 351 DRIKEILEGTLGSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSI 410

Query: 319 LIRSLYQKGEIQRAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVF 140
           LIRS  QKG   RAE+LFDDL +KEILL D+GCTP++AAYNP+FEY C  GKTKKAEKVF
Sbjct: 411 LIRSFCQKGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVF 470

Query: 139 RQLLKRGTQDPPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPDV 2
           RQL++RGTQDP A++ LIMGHCKEGTF    +LLVLMLRR++VP++
Sbjct: 471 RQLMRRGTQDPFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNI 516



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 32/177 (18%)
 Frame = -2

Query: 460 GEFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQPDSASYSILIRSLYQKGEIQR 281
           G  P     FNTL+ ++  A    ++L+VF  M  LG+ P   +++ L   L ++G    
Sbjct: 150 GTVPLQDRYFNTLIQSYGKAGLFQESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGM 209

Query: 280 AEELFDDLSEK----------EILLG--------DEG-----------CTPIVAAYNPIF 188
             ELFD++ +            IL+         D+G           C P V  YN I 
Sbjct: 210 VYELFDEMLKTFGAKPDVYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIV 269

Query: 187 EYLCAKGKTKKAEKVFRQLLKRGTQDPP---AFKTLIMGHCKEGTFEAGFDLLVLML 26
           + LC  GK + A  V + ++KRG Q  P   ++ TL+ G+C++   E   D+   M+
Sbjct: 270 DGLCRAGKVEIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMI 326



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
 Frame = -2

Query: 457 EFPPDTCTFNTLMNAHCNADRLDDALQVFMRMNELGVQ--PDSASYSILIRSLYQKGEIQ 284
           E  PD  T+NT+++  C A +++ A  V   M + G Q  P+  SY+ L+R   +K E++
Sbjct: 257 ECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMVKRGHQLSPNVVSYTTLVRGYCEKQEVE 316

Query: 283 RAEELFDDLSEKEILLGDEGCTPIVAAYNPIFEYLCAKGKTKKAEKVFRQLLKRG--TQD 110
           RA ++F+++        D G  P    YN + + LC   +  + +++    L  G    D
Sbjct: 317 RALDVFEEMI-------DCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPD 369

Query: 109 PPAFKTLIMGHCKEGTFEAGFDLLVLMLRRNFVPD 5
              F TLI  HC  G  +    +   ML     PD
Sbjct: 370 TCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPD 404