BLASTX nr result
ID: Aconitum23_contig00042569
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00042569
(642 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera] 69 3e-21
gb|ABJ96383.1| hypothetical protein [Prunus persica] 71 2e-20
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc... 77 2e-19
gb|AAB82754.1| retrofit [Oryza longistaminata] 62 9e-19
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 64 2e-18
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 64 2e-18
ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643... 62 2e-18
ref|XP_012700036.1| PREDICTED: uncharacterized protein LOC105914... 74 3e-18
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 61 3e-18
ref|XP_008360352.1| PREDICTED: disease resistance protein At4g27... 55 6e-18
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 64 1e-17
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 59 2e-17
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 59 2e-17
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 65 2e-17
gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-... 65 2e-17
ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440... 65 4e-17
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc... 56 5e-17
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz... 56 5e-17
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 65 8e-17
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 63 1e-16
>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
Length = 431
Score = 69.3 bits (168), Expect(3) = 3e-21
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
+SLLKE + L P Y DN + YL ANPI + AK++EI+YH V +RV K VRF
Sbjct: 229 QSLLKELFIPLFQPPVLYCDNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRF 288
Query: 495 ISTKDQVANISTK 533
+ ++DQVA+I TK
Sbjct: 289 LPSEDQVADILTK 301
Score = 57.8 bits (138), Expect(3) = 3e-21
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +2
Query: 191 YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
+A CP DRRSTSGYCIF NL + S KQ+ VS+SSTE++
Sbjct: 174 WASCPDDRRSTSGYCIFFGGNLVSWSASKQKVVSRSSTESE 214
Score = 21.9 bits (45), Expect(3) = 3e-21
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 79 TNWLAVKRILRYLNIQLLLVFSF 147
T+ VKR+LRYL L SF
Sbjct: 136 THLQVVKRVLRYLKGSLFYGLSF 158
>gb|ABJ96383.1| hypothetical protein [Prunus persica]
Length = 193
Score = 71.2 bits (173), Expect(3) = 2e-20
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +3
Query: 318 SLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRFI 497
SLL+E + S++P + DN G+ YL+ANPIF A K++EI+YH V +V+ + V+FI
Sbjct: 101 SLLQELGFSTSTSPVLWCDNLGATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQFI 160
Query: 498 STKDQVANISTK 533
STKDQ+A+I TK
Sbjct: 161 STKDQLADIMTK 172
Score = 51.6 bits (122), Expect(3) = 2e-20
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 191 YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
+A CP DRRST G+ I+L NL + S +KQ TV++SSTE +
Sbjct: 45 WAGCPDDRRSTGGFAIYLGCNLVSWSAKKQHTVARSSTEAE 85
Score = 23.9 bits (50), Expect(3) = 2e-20
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 82 NWLAVKRILRYL 117
+W +VKRILRYL
Sbjct: 8 HWASVKRILRYL 19
>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1762
Score = 76.6 bits (187), Expect(2) = 2e-19
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +3
Query: 318 SLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRFI 497
S+L+E V + +P + DN G+ YL++NP+F A K+IEI+YH V +RVANK +RFI
Sbjct: 1672 SVLEELGVKIDQSPVLWCDNLGATYLSSNPVFHARTKHIEIDYHFVQERVANKMLDIRFI 1731
Query: 498 STKDQVANISTKGRL*HGLNSCVHGLN 578
TKDQ+A+ TK L ++ LN
Sbjct: 1732 GTKDQIADGFTKALSTQNLRHFMYNLN 1758
Score = 46.2 bits (108), Expect(2) = 2e-19
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +2
Query: 191 YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
+A DRRST G+ I+ NL + S RKQRTVS+SSTE +
Sbjct: 1616 WAGSLDDRRSTGGFVIYFGPNLVSWSARKQRTVSRSSTEAE 1656
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 61.6 bits (148), Expect(3) = 9e-19
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LLKE + + DN G+ YL+ANP+F A K+IE++YH V +RV+ K + F
Sbjct: 1354 QTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDF 1413
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLN 578
+ + DQVA+ TK L + H LN
Sbjct: 1414 VPSGDQVADGFTKALSACLLENFKHNLN 1441
Score = 50.1 bits (118), Expect(3) = 9e-19
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 161 TTITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
T + G S +A DR+ST G+ +FL SNL + S RKQ TVS+SSTE +
Sbjct: 1289 TLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAE 1339
Score = 28.9 bits (63), Expect(3) = 9e-19
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +1
Query: 79 TNWLAVKRILRYLN 120
++W+AVKRILRYLN
Sbjct: 1261 SHWIAVKRILRYLN 1274
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 63.9 bits (154), Expect(2) = 2e-18
Identities = 32/75 (42%), Positives = 49/75 (65%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LLKE V+ + DN G+ YL+ANP+F A K+IE++YH V +RV + +RF
Sbjct: 824 QTLLKELGVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVVQRLLDIRF 883
Query: 495 ISTKDQVANISTKGR 539
IS+ DQ+A+ TK +
Sbjct: 884 ISSGDQLADGFTKAQ 898
Score = 55.8 bits (133), Expect(2) = 2e-18
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +2
Query: 161 TTITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
TTI+ S +A C DRRST G+ IFL NL + S RKQ TVS+SSTE +
Sbjct: 759 TTISAFSDADWAGCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAE 809
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 63.9 bits (154), Expect(2) = 2e-18
Identities = 32/75 (42%), Positives = 49/75 (65%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LLKE V+ + DN G+ YL+ANP+F A K+IE++YH V +RV + +RF
Sbjct: 990 QTLLKELGVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVVQRLLDIRF 1049
Query: 495 ISTKDQVANISTKGR 539
IS+ DQ+A+ TK +
Sbjct: 1050 ISSGDQLADGFTKAQ 1064
Score = 55.8 bits (133), Expect(2) = 2e-18
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +2
Query: 161 TTITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
TTI+ S +A C DRRST G+ IFL NL + S RKQ TVS+SSTE +
Sbjct: 925 TTISAFSDADWAGCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAE 975
>ref|XP_012084305.1| PREDICTED: uncharacterized protein LOC105643719 [Jatropha curcas]
Length = 1003
Score = 62.0 bits (149), Expect(3) = 2e-18
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = +3
Query: 318 SLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRFI 497
SLL E V++ T + DN G++YLT+NP+F A K+IE++ H V +V +K+ ++FI
Sbjct: 910 SLLSELGVSVLPA-TLWCDNIGAIYLTSNPVFHARTKHIELDVHFVRDQVQHKKIQIKFI 968
Query: 498 STKDQVANISTK 533
S +DQ+A+I TK
Sbjct: 969 SGQDQIADIMTK 980
Score = 53.1 bits (126), Expect(3) = 2e-18
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +2
Query: 191 YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
+A CP DR+STSGY I+L +NL + S +KQ TV++SSTE++
Sbjct: 854 WAGCPDDRKSTSGYAIYLGNNLISWSSKKQSTVARSSTESE 894
Score = 24.3 bits (51), Expect(3) = 2e-18
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1
Query: 82 NWLAVKRILRYLN 120
+W+A KR+LRYL+
Sbjct: 817 HWIAAKRLLRYLH 829
>ref|XP_012700036.1| PREDICTED: uncharacterized protein LOC105914016 [Setaria italica]
Length = 726
Score = 73.6 bits (179), Expect(2) = 3e-18
Identities = 42/88 (47%), Positives = 53/88 (60%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
ESLL E V L P + DN + YL+ NP+F A AK+IEI++H V +RVA KQ VRF
Sbjct: 631 ESLLAELGVRLKQPPVLWCDNLDATYLSGNPVFHARAKHIEIDFHFVRERVARKQLQVRF 690
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLN 578
I T DQ+A+ TK H L + LN
Sbjct: 691 IPTGDQLADGFTKALPVHKLEEFRNNLN 718
Score = 45.4 bits (106), Expect(2) = 3e-18
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 191 YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
+A DRRST G+ +F NL + S RKQ TVS+SSTE +
Sbjct: 576 WAGSVDDRRSTGGFAVFFGDNLISWSARKQATVSRSSTEAE 616
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 60.8 bits (146), Expect(3) = 3e-18
Identities = 33/88 (37%), Positives = 50/88 (56%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LL+E + + DN G+ YL+ANP+F A K+IE++YH V +RV+ K + F
Sbjct: 1345 QTLLRELGIDSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDF 1404
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLN 578
+ + DQVA+ TK L H LN
Sbjct: 1405 VPSGDQVADGFTKALSVRLLEHFKHNLN 1432
Score = 50.4 bits (119), Expect(3) = 3e-18
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 161 TTITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
T + G S +A DR+ST G+ +FL SNL + S RKQ TVS+SSTE +
Sbjct: 1280 TLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAE 1330
Score = 27.3 bits (59), Expect(3) = 3e-18
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 82 NWLAVKRILRYLN 120
+W AVKRILRYLN
Sbjct: 1253 HWTAVKRILRYLN 1265
>ref|XP_008360352.1| PREDICTED: disease resistance protein At4g27190-like [Malus
domestica]
Length = 929
Score = 55.1 bits (131), Expect(3) = 6e-18
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 164 TITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
T+T + YA P DR+ST GYCIFL NL + S +KQ+ VS+SSTE++
Sbjct: 626 TLTAFADSDYAGDPDDRKSTGGYCIFLGPNLVSWSSKKQKGVSRSSTESE 675
Score = 54.7 bits (130), Expect(3) = 6e-18
Identities = 21/62 (33%), Positives = 42/62 (67%)
Frame = +3
Query: 351 STPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRFISTKDQVANIST 530
S P + DN ++ L +NP+F A +++E++YH + ++V ++ V +++T+DQ+A+ T
Sbjct: 701 SPPKVWCDNISAISLASNPVFHARTRHVEVDYHYIREKVTRQELQVGYVATQDQLADFLT 760
Query: 531 KG 536
KG
Sbjct: 761 KG 762
Score = 28.1 bits (61), Expect(3) = 6e-18
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 79 TNWLAVKRILRYL 117
T+W+AVKRILRYL
Sbjct: 598 THWIAVKRILRYL 610
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 64.3 bits (155), Expect(3) = 1e-17
Identities = 36/91 (39%), Positives = 53/91 (58%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LL E V S + DN G+ YL+ANP+F A K+IE++YH V +RV+ K + F
Sbjct: 1156 QTLLAELQVESPSMAKLWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIDF 1215
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLNSGE 587
+ T DQVA+ TK L + + LN G+
Sbjct: 1216 VPTGDQVADGFTKALSVRQLENFKYNLNLGK 1246
Score = 47.8 bits (112), Expect(3) = 1e-17
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 167 ITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
++ S +A DRRST G+ +FL NL + S RKQ TVS+SSTE++
Sbjct: 1093 VSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESE 1141
Score = 25.0 bits (53), Expect(3) = 1e-17
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 82 NWLAVKRILRYL 117
+W AVKRILRYL
Sbjct: 1064 HWAAVKRILRYL 1075
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 59.3 bits (142), Expect(3) = 2e-17
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
+++LKE + + DN G+ YL+ANP+F A K+I ++YH V +RV+ K + F
Sbjct: 1357 QTVLKELGIESPKAAKIWCDNLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEIDF 1416
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLN 578
+ + DQVA+ TK L + H LN
Sbjct: 1417 VPSGDQVADGFTKALSARLLENFKHNLN 1444
Score = 48.1 bits (113), Expect(3) = 2e-17
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +2
Query: 161 TTITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
T + G S A DR+ST G+ +FL SNL + S RKQ TVS+SSTE +
Sbjct: 1292 TLVHGYSDADGAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAE 1342
Score = 28.9 bits (63), Expect(3) = 2e-17
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +1
Query: 79 TNWLAVKRILRYLN 120
++W+AVKRILRYLN
Sbjct: 1264 SHWIAVKRILRYLN 1277
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 59.3 bits (142), Expect(3) = 2e-17
Identities = 32/88 (36%), Positives = 50/88 (56%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
+++LKE + + DN G+ YL+ANP+F A K+I ++YH V +RV+ K + F
Sbjct: 1357 QTVLKELGIESPKAAKIWCDNLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEIDF 1416
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLN 578
+ + DQVA+ TK L + H LN
Sbjct: 1417 VPSGDQVADGFTKALSARLLENFKHNLN 1444
Score = 48.1 bits (113), Expect(3) = 2e-17
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +2
Query: 161 TTITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
T + G S A DR+ST G+ +FL SNL + S RKQ TVS+SSTE +
Sbjct: 1292 TLVHGYSDADGAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAE 1342
Score = 28.9 bits (63), Expect(3) = 2e-17
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +1
Query: 79 TNWLAVKRILRYLN 120
++W+AVKRILRYLN
Sbjct: 1264 SHWIAVKRILRYLN 1277
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 65.1 bits (157), Expect(2) = 2e-17
Identities = 35/91 (38%), Positives = 55/91 (60%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LL+E ++ + + DN G+ YL+ NP+F A K+IE++YH V +RVA K V +
Sbjct: 1340 QTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDY 1399
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLNSGE 587
+ST DQVA+ TK L + + LN G+
Sbjct: 1400 VSTNDQVADGFTKALPVKQLENFKYNLNLGK 1430
Score = 51.2 bits (121), Expect(2) = 2e-17
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 41 VNKRCHFMHD-SREQTGLPSKGFSDI*TXXXXXXXXXXXXFTTITGLSGI*YADCPSDRR 217
VNK C F+H+ + E + I ++G S +A C DRR
Sbjct: 1234 VNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRR 1293
Query: 218 STSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
ST G+ ++L NL + + +KQ TVS+SSTE +
Sbjct: 1294 STGGFAVYLGDNLVSWNAKKQATVSRSSTEAE 1325
>gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-class, partial
[Oryza sativa Japonica Group]
Length = 352
Score = 65.1 bits (157), Expect(2) = 2e-17
Identities = 35/91 (38%), Positives = 55/91 (60%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LL+E ++ + + DN G+ YL+ NP+F A K+IE++YH V +RVA K V +
Sbjct: 255 QTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDY 314
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLNSGE 587
+ST DQVA+ TK L + + LN G+
Sbjct: 315 VSTNDQVADGFTKALPVKQLENFKYNLNLGK 345
Score = 51.2 bits (121), Expect(2) = 2e-17
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 41 VNKRCHFMHD-SREQTGLPSKGFSDI*TXXXXXXXXXXXXFTTITGLSGI*YADCPSDRR 217
VNK C F+H+ + E + I ++G S +A C DRR
Sbjct: 149 VNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRR 208
Query: 218 STSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
ST G+ ++L NL + + +KQ TVS+SSTE +
Sbjct: 209 STGGFAVYLGDNLVSWNAKKQATVSRSSTEAE 240
>ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440084 [Malus domestica]
Length = 1106
Score = 64.7 bits (156), Expect(2) = 4e-17
Identities = 39/91 (42%), Positives = 48/91 (52%)
Frame = +2
Query: 41 VNKRCHFMHDSREQTGLPSKGFSDI*TXXXXXXXXXXXXFTTITGLSGI*YADCPSDRRS 220
VN+ C FMH RE +K +T S +A CP DRRS
Sbjct: 893 VNQVCQFMHAPREPHLQAAKRILRFLKAXVSHGLWFKKGDIHLTAYSDADWAGCPFDRRS 952
Query: 221 TSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
TSGYCIFL SNL + S +KQ TV++SSTE +
Sbjct: 953 TSGYCIFLGSNLISWSAKKQPTVARSSTEAE 983
Score = 50.4 bits (119), Expect(2) = 4e-17
Identities = 23/71 (32%), Positives = 43/71 (60%)
Frame = +3
Query: 321 LLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRFIS 500
+ K+ L P+ + DN ++ L +NP+F A K+IE++YH + + V V+++
Sbjct: 1000 VFKDLGXHLPHVPSLWCDNLSAISLASNPVFHARTKHIELDYHYIXELVLANLLKVQYVC 1059
Query: 501 TKDQVANISTK 533
++DQ+A+I TK
Sbjct: 1060 SQDQLADIHTK 1070
>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 55.8 bits (133), Expect(3) = 5e-17
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +2
Query: 167 ITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
+ S +A C DRRSTSG+ +FL SNL + SVRKQ TVS+SSTE +
Sbjct: 872 VNAFSDADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAE 920
Score = 53.1 bits (126), Expect(3) = 5e-17
Identities = 35/90 (38%), Positives = 50/90 (55%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LLKE + S + DN G+ YL+ANPIF A K+IE+ +H V +RVA K +
Sbjct: 935 QTLLKELGIQCPSMARLWCDNLGATYLSANPIFHARTKHIEVYFHFVRERVAQKLLEIEG 994
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLNSG 584
S D+ + T G L+ C +G NSG
Sbjct: 995 ASAVDE-KMVRTVGEGGVDLSFCNNG-NSG 1022
Score = 25.8 bits (55), Expect(3) = 5e-17
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 79 TNWLAVKRILRYL 117
T+W AVKRI+RYL
Sbjct: 842 THWSAVKRIIRYL 854
>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1139
Score = 55.8 bits (133), Expect(3) = 5e-17
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +2
Query: 167 ITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
+ S +A C DRRSTSG+ +FL SNL + SVRKQ TVS+SSTE +
Sbjct: 878 VNAFSDADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAE 926
Score = 53.1 bits (126), Expect(3) = 5e-17
Identities = 35/90 (38%), Positives = 50/90 (55%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LLKE + S + DN G+ YL+ANPIF A K+IE+ +H V +RVA K +
Sbjct: 941 QTLLKELGIQCPSMARLWCDNLGATYLSANPIFHARTKHIEVYFHFVRERVAQKLLEIEG 1000
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLNSG 584
S D+ + T G L+ C +G NSG
Sbjct: 1001 ASAVDE-KMVRTVGEGGVDLSFCNNG-NSG 1028
Score = 25.8 bits (55), Expect(3) = 5e-17
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 79 TNWLAVKRILRYL 117
T+W AVKRI+RYL
Sbjct: 848 THWSAVKRIIRYL 860
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 64.7 bits (156), Expect(3) = 8e-17
Identities = 29/74 (39%), Positives = 50/74 (67%)
Frame = +3
Query: 312 TESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVR 491
T++LL+E ++++S PT YYDN + Y+ NP+F A K+IEI+ H + +V + + ++
Sbjct: 1282 TQALLRELCISITSIPTLYYDNISAYYMAKNPVFHARTKHIEIDLHFIRDQVLHNKLQLQ 1341
Query: 492 FISTKDQVANISTK 533
+I + DQ A+I TK
Sbjct: 1342 YIPSTDQPADILTK 1355
Score = 43.9 bits (102), Expect(3) = 8e-17
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 203 PSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
P DRRS+SGY ++L +NL + + KQ+ VS+SS E++
Sbjct: 1232 PDDRRSSSGYLVYLGNNLVSWTASKQKVVSRSSAESE 1268
Score = 25.4 bits (54), Expect(3) = 8e-17
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 79 TNWLAVKRILRYL 117
T+W +VKRILRYL
Sbjct: 1190 THWSSVKRILRYL 1202
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 62.8 bits (151), Expect(3) = 1e-16
Identities = 35/90 (38%), Positives = 51/90 (56%)
Frame = +3
Query: 315 ESLLKEPDVTLSSTPTPYYDNFGSMYLTANPIFPAHAKYIEINYHCVCKRVANKQPMVRF 494
++LL E V + DN G+ YL++NP+F A K+IE++YH V +RV+ K + F
Sbjct: 1356 QTLLTELQVQSPPMAKLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVSQKLLEIDF 1415
Query: 495 ISTKDQVANISTKGRL*HGLNSCVHGLNSG 584
+ T DQVA+ TK L + H LN G
Sbjct: 1416 VPTGDQVADGFTKALPVRQLENFKHNLNLG 1445
Score = 45.8 bits (107), Expect(3) = 1e-16
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +2
Query: 167 ITGLSGI*YADCPSDRRSTSGYCIFLASNLTALSVRKQRTVSKSSTETD 313
++ S +A DRRST G+ +FL NL + RKQ TVS+SSTE++
Sbjct: 1293 VSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVSRSSTESE 1341
Score = 25.0 bits (53), Expect(3) = 1e-16
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 82 NWLAVKRILRYL 117
+W AVKRILRYL
Sbjct: 1264 HWAAVKRILRYL 1275