BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00040815
         (523 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein A...    80   2e-23
ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433...    80   3e-23
ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438...    78   1e-22
ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein A...    77   2e-22
ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein A...    73   7e-22
ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353...    69   2e-21
ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418...    74   3e-21
ref|XP_008346905.1| PREDICTED: uncharacterized protein LOC103409...    74   1e-20
ref|XP_008370907.1| PREDICTED: putative ribonuclease H protein A...    74   1e-20
ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein A...    67   4e-20
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    64   2e-19
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    64   2e-19
ref|XP_011470669.1| PREDICTED: uncharacterized protein LOC101307...    64   2e-18
gb|ABA99487.1| retrotransposon protein, putative, unclassified [...    64   3e-18
ref|XP_008348238.1| PREDICTED: uncharacterized protein LOC103411...    64   4e-18
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    59   4e-18
ref|XP_009122912.1| PREDICTED: putative ribonuclease H protein A...    67   5e-18
ref|XP_009103574.1| PREDICTED: putative ribonuclease H protein A...    67   5e-18
ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430...    63   9e-18
ref|XP_008356537.1| PREDICTED: uncharacterized protein LOC103420...    66   9e-18

>ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 1048

 Score = 80.5 bits (197), Expect(2) = 2e-23
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247 RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
           RNF+WSG+   KK V V+W  +C PK++GGLG+R L  +N    +KL W + T D+  S 
Sbjct: 495 RNFIWSGDVTSKKSVTVSWRQICAPKNEGGLGLRDLGSLNTTALLKLGWLIITTDSPWSI 554

Query: 67  FLKNKFLKSNGTWF--EYKRSSIW 2
           +L+ +F K +G  +   YKRSSIW
Sbjct: 555 YLRERF-KLHGRLYSCSYKRSSIW 577



 Score = 55.5 bits (132), Expect(2) = 2e-23
 Identities = 25/74 (33%), Positives = 43/74 (58%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  YLGV +  G+ K+ ++  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 415 EGKAPFVYLGVPIFCGKPKRSYLQALADKAKAKLTGWKGKLLSMAGRVQLTQSVFQSMLL 474

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 475 HSFSVYKWPSSLLR 488


>ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433498 [Malus domestica]
          Length = 1384

 Score = 79.7 bits (195), Expect(2) = 3e-23
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247  RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
            RNF+WSG+   KK V V+W  +C PK++GGLG+R L  +N    +KL W + T D+  S 
Sbjct: 831  RNFIWSGDVTSKKXVTVSWRQICAPKNEGGLGLRDLGSLNTXALLKLGWLIITTDSPWSI 890

Query: 67   FLKNKFLKSNGTWF--EYKRSSIW 2
            +L+ +F K +G  +   YKRSSIW
Sbjct: 891  YLRERF-KLHGRLYSCSYKRSSIW 913



 Score = 55.5 bits (132), Expect(2) = 3e-23
 Identities = 25/74 (33%), Positives = 43/74 (58%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  YLGV +  G+ K+ ++  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 751 EGKXPFVYLGVPIFCGKPKRSYLQALADKAKAKLTGWKGKLLSMAGRVQLTQSVFQSMLL 810

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 811 HSFSVYKWPSSLLR 824


>ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438319 [Malus domestica]
          Length = 1384

 Score = 77.8 bits (190), Expect(2) = 1e-22
 Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247  RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
            RNF+WSG+   KK V V+W  +C PK++GGLG+R L  +N    +K+ W + T D+  S 
Sbjct: 831  RNFIWSGDVTSKKSVTVSWRQICAPKNEGGLGLRDLGSLNTTXLLKJGWLIITTDSPWSI 890

Query: 67   FLKNKFLKSNGTWF--EYKRSSIW 2
            +L+ +F K +G  +   YK SSIW
Sbjct: 891  YLRERF-KLHGRLYSCSYKXSSIW 913



 Score = 55.5 bits (132), Expect(2) = 1e-22
 Identities = 25/74 (33%), Positives = 43/74 (58%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  YLGV +  G+ K+ ++  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 751 EGKXPFVYLGVPIFCGKPKRSYLQALADKAKAKLTGWKGKLLSMAGRVQLTQSVFQSMLL 810

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 811 HSFSVYKWPSSLLR 824


>ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 805

 Score = 76.6 bits (187), Expect(2) = 2e-22
 Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247 RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
           RNF+WSG+   KK V V+W  +C PK++GGLG+R L  +N    +KL W + T D+  S 
Sbjct: 252 RNFIWSGDVTSKKXVTVSWXQICAPKNEGGLGLRDLGSLNTTALLKLGWLIITTDSPWSI 311

Query: 67  FLKNKFLKSNGTWF--EYKRSSIW 2
           +++ +F K +G  +   Y RSSIW
Sbjct: 312 YJRXRF-KLHGRLYSCSYMRSSIW 334



 Score = 55.8 bits (133), Expect(2) = 2e-22
 Identities = 25/74 (33%), Positives = 42/74 (56%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  Y GV +  G+ K+ H+  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 172 EGKXPFVYXGVPIFCGKPKRSHLQALADKAKAKLTGWKGKLLSMAGRVQLTQSVFQSMLL 231

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 232 HSFSVYKWPSSLLR 245


>ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 715

 Score = 73.2 bits (178), Expect(2) = 7e-22
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247 RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
           RNF+WSG+   KK V V+W  +C PK++GGLG+R L  +N    +KL   + T D+  S 
Sbjct: 162 RNFIWSGDVTSKKSVTVSWRQICAPKNEGGLGLRDLGSLNTTALLKLGXLIITXDSPWSI 221

Query: 67  FLKNKFLKSNGTWF--EYKRSSIW 2
           +L+ +F K +G  +   YK SSIW
Sbjct: 222 YLRERF-KLHGRLYSCSYKXSSIW 244



 Score = 57.4 bits (137), Expect(2) = 7e-22
 Identities = 26/74 (35%), Positives = 43/74 (58%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  YLGV +  G+ K+ H+  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 82  EGKAPFVYLGVPIFCGKPKRSHLQALADKAKAKLTGWXGKLLSMAGRVQLTQSVFQSMLL 141

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 142 HSFSVYKWPSSLLR 155


>ref|XP_011470534.1| PREDICTED: uncharacterized protein LOC105353242 [Fragaria vesca
            subsp. vesca]
          Length = 1179

 Score = 68.6 bits (166), Expect(2) = 2e-21
 Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247  RNFLWSGNPNIKKGV-VVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICS 71
            RNFLWSG+ + K+GV +V W   C P D+GGLG+++L  +N +L +K AW + ++ +   
Sbjct: 800  RNFLWSGSID-KRGVPLVAWKTCCAPMDEGGLGLKQLGVLNRSLLLKKAWEIYSSTSNGC 858

Query: 70   SFLKNKFLKSNGTWFEYKRSSIW 2
            +FL+N+F ++      Y  SSIW
Sbjct: 859  NFLRNRFWRNGVLRRSYATSSIW 881



 Score = 60.5 bits (145), Expect(2) = 2e-21
 Identities = 28/73 (38%), Positives = 47/73 (64%)
 Frame = -2

Query: 483 PKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPIHNMS 304
           P  YLGV + +G+ +  H   +VDKIR R S+W GS+L + GR  LI+S++ S+ +++  
Sbjct: 724 PFTYLGVPIFRGKPRASHFQYIVDKIRLRFSSWKGSLLSMAGRLQLIKSVMASMVVYSFQ 783

Query: 303 IYK*PRSSIKEAE 265
           IY+ P + ++  E
Sbjct: 784 IYEWPVTLLRRLE 796


>ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418244 [Malus domestica]
          Length = 1384

 Score = 74.3 bits (181), Expect(2) = 3e-21
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247  RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
            RNF+WS +   KK V V+   +C PK++GGLG+R L  +N    +KL W + T D+  S 
Sbjct: 831  RNFIWSXDVTXKKSVTVSXRQICAPKBEGGLGLRDLGSLNTXALLKLGWLIITTDSPWSI 890

Query: 67   FLKNKFLKSNGTWF--EYKRSSIW 2
            +L+ +F K +G  +   YKRSSIW
Sbjct: 891  YLRERF-KLHGRLYSCSYKRSSIW 913



 Score = 54.3 bits (129), Expect(2) = 3e-21
 Identities = 25/74 (33%), Positives = 42/74 (56%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  YLGV +  G+ K+  +  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 751 EGKAPFVYLGVPIFCGKPKRSXLQALADKAKXKLTGWKGKLLSMAGRVQLTQSVFQSMLL 810

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 811 HSFSVYKWPSSLLR 824


>ref|XP_008346905.1| PREDICTED: uncharacterized protein LOC103409892 [Malus domestica]
          Length = 1251

 Score = 74.3 bits (181), Expect(2) = 1e-20
 Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247 RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
           RNF+WSG    KK V  +W  +C PK++GGLG+R L  +N    +KL W + T D+  S 
Sbjct: 698 RNFIWSGXVTSKKXVTXSWXQICAPKNEGGLGLRDLGXLNXTALLKLGWLIITTDSPWSI 757

Query: 67  FLKNKFLKSNGTWF--EYKRSSIW 2
           +++ +F K +G  +   Y RSSIW
Sbjct: 758 YJRXRF-KLHGRLYSCSYXRSSIW 780



 Score = 52.0 bits (123), Expect(2) = 1e-20
 Identities = 24/74 (32%), Positives = 41/74 (55%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  Y GV +  G+ K+  +  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 618 EGKXPFVYXGVPIFCGKPKRSXLQALADKAKAKLTGWXGKLLSMAGRVQLTQSVFQSMLL 677

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 678 HSFSVYKWPSSLLR 691


>ref|XP_008370907.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 899

 Score = 74.3 bits (181), Expect(2) = 1e-20
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247 RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
           RNF+WSG+   KK V V+W  +C  K++ GLG+R L  +N    +KL W + T D+  S 
Sbjct: 346 RNFIWSGDVTXKKXVTVSWRQICAXKNEXGLGLRDLGSLNTXALLKLGWLIITTDSPWSI 405

Query: 67  FLKNKFLKSNGTWF--EYKRSSIW 2
           +L+ +F K +G  +   YKRSSIW
Sbjct: 406 YLRERF-KLHGRLYSCSYKRSSIW 428



 Score = 52.0 bits (123), Expect(2) = 1e-20
 Identities = 24/70 (34%), Positives = 40/70 (57%)
 Frame = -2

Query: 483 PKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPIHNMS 304
           P  YLGV +  G+ K   +  + DK + + + W G +L + GR  L QS+  S+ +H+ S
Sbjct: 270 PFVYLGVPIFCGKPKXSXLQALADKAKAKLTGWKGKLLSMXGRVQLTQSVFQSMLLHSFS 329

Query: 303 IYK*PRSSIK 274
           +YK P S ++
Sbjct: 330 VYKWPSSLLR 339


>ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 768

 Score = 67.0 bits (162), Expect(2) = 4e-20
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = -1

Query: 247 RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNI 77
           RNF+WSG+   KK V V+WH +C PK++GGLG+R L  +N    +KL W + T D +
Sbjct: 252 RNFIWSGDVTSKKLVTVSWHQICAPKNEGGLGLRDLGSLNTTALLKLGWLIITTDXL 308



 Score = 57.8 bits (138), Expect(2) = 4e-20
 Identities = 26/74 (35%), Positives = 43/74 (58%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  YLGV +  G+ K+ H+  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 172 EGKTPFVYLGVPIFCGKPKRSHLQALADKAKAKLTGWKGKLLSMAGRVQLTQSVFQSMLL 231

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 232 HSFSVYKWPSSLLR 245


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 63.9 bits (154), Expect(2) = 2e-19
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = -2

Query: 486 LPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPIHNM 307
           LP  YLG  + KG+ K +H   + DK++ + + W  S+L I GR  L++S++ S+ +H M
Sbjct: 492 LPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKWKASLLSIAGRIQLVKSVVQSMLVHTM 551

Query: 306 SIYK*PRSSIKEAE 265
           SIY  P   +KE E
Sbjct: 552 SIYSWPIKILKEME 565



 Score = 58.5 bits (140), Expect(2) = 2e-19
 Identities = 23/73 (31%), Positives = 44/73 (60%)
 Frame = -1

Query: 268 REYNPNIRNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQT 89
           +E    I+NF+WSG+   +K V V W  +C   ++GGLG++ L  +N+A  +K+ W +  
Sbjct: 562 KEMEKWIKNFIWSGDVTKRKMVTVAWRKICADYEEGGLGVKSLICLNEATNLKICWNLMQ 621

Query: 88  NDNICSSFLKNKF 50
           +D   ++ ++N +
Sbjct: 622 SDEQWANIIRNSW 634


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 64.3 bits (155), Expect(2) = 2e-19
 Identities = 29/74 (39%), Positives = 48/74 (64%)
 Frame = -2

Query: 486 LPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPIHNM 307
           LP  YLGV + KG+ K +H+  +VDKI  + S W  S+L I GR  +++S++ S+  H++
Sbjct: 33  LPFTYLGVPIFKGKPKVIHLQPIVDKIIAKLSTWKASLLSIAGRVQMVKSVIQSMLTHSI 92

Query: 306 SIYK*PRSSIKEAE 265
           ++Y  P S +K+ E
Sbjct: 93  TVYNWPTSLLKDLE 106



 Score = 57.8 bits (138), Expect(2) = 2e-19
 Identities = 25/56 (44%), Positives = 36/56 (64%)
 Frame = -1

Query: 268 REYNPNIRNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAW 101
           ++   +I+NF+WSG+ + +K V V W  +C P DQGGL IR L  +N A  +KL W
Sbjct: 103 KDLEKSIKNFIWSGDTSKRKLVTVAWKKLCRPFDQGGLRIRSLIQLNSASNLKLCW 158


>ref|XP_011470669.1| PREDICTED: uncharacterized protein LOC101307646 [Fragaria vesca
           subsp. vesca]
          Length = 796

 Score = 64.3 bits (155), Expect(2) = 2e-18
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 RNFLWSGNPNIKKGV-VVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICS 71
           RNFLWSG+ + K+G+ +V+W   C P D+GGLG+++L  +N +L +K  W + T+     
Sbjct: 328 RNFLWSGDID-KRGIPLVSWTSCCAPIDEGGLGLKKLDVLNSSLLLKRCWEIFTSSFEGC 386

Query: 70  SFLKNKFLKSNGTWFEYKRSSIW 2
            F++N+F K       Y  SSIW
Sbjct: 387 CFIRNRFSKRR----SYAPSSIW 405



 Score = 54.7 bits (130), Expect(2) = 2e-18
 Identities = 25/73 (34%), Positives = 44/73 (60%)
 Frame = -2

Query: 483 PKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPIHNMS 304
           P  YLG  +  G+ +  H   +VDK+R + S+W GS L + GR  LI+S++ S+ ++   
Sbjct: 252 PFMYLGAPIFHGKPRVAHFQAIVDKVRLKLSSWVGSFLSMAGRLQLIKSVIYSMFVYTFQ 311

Query: 303 IYK*PRSSIKEAE 265
           +Y+ P S +++ E
Sbjct: 312 VYEWPVSLLRKVE 324


>gb|ABA99487.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1627

 Score = 64.3 bits (155), Expect(2) = 3e-18
 Identities = 30/68 (44%), Positives = 41/68 (60%)
 Frame = -1

Query: 247  RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
            R FLW  +  I+K  +V W  +CLPKDQGGLGI  L  +N AL  K  W ++  + +   
Sbjct: 1257 RRFLWQEDQGIRKYHLVKWLVICLPKDQGGLGILDLDVMNKALLGKWLWNLENTEGLWQD 1316

Query: 67   FLKNKFLK 44
             L+NK+LK
Sbjct: 1317 MLRNKYLK 1324



 Score = 53.9 bits (128), Expect(2) = 3e-18
 Identities = 26/66 (39%), Positives = 39/66 (59%)
 Frame = -2

Query: 486  LPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPIHNM 307
            LP KYLGV + + R+       + +KI K+   W G +L I GR  LI S ++S+P++ M
Sbjct: 1180 LPMKYLGVPINQVRIHNKDWKPVEEKIEKKLGCWQGKLLAIGGRVALINSSISSVPLYMM 1239

Query: 306  SIYK*P 289
            S+Y  P
Sbjct: 1240 SLYSLP 1245


>ref|XP_008348238.1| PREDICTED: uncharacterized protein LOC103411380 [Malus domestica]
          Length = 1384

 Score = 64.3 bits (155), Expect(2) = 4e-18
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247  RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
            RNF+WSG+   KK V V+W  +C  K++ GLG+R L  +N    +KL   + T D+    
Sbjct: 831  RNFIWSGDVTSKKXVTVSWRQICAXKNEXGLGLRDLGSLNXTALLKLGXLIITXDSPWXI 890

Query: 67   FLKNKFLKSNGTWF--EYKRSSIW 2
            +++ +F K +G  +   Y RSSIW
Sbjct: 891  YJRXRF-KLHGRLYSCSYXRSSIW 913



 Score = 53.5 bits (127), Expect(2) = 4e-18
 Identities = 25/74 (33%), Positives = 41/74 (55%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  YLGV +  G+ K+  +  + DK + + + W G +L + GR  L QS+  S+ +
Sbjct: 751 EGKXPFVYLGVPIFCGKPKRXXLQALADKAKAKLTGWXGKLLSMAGRVQLTQSVFQSMLL 810

Query: 315 HNMSIYK*PRSSIK 274
           H  S+YK P S ++
Sbjct: 811 HXFSVYKWPSSLLR 824


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 58.9 bits (141), Expect(2) = 4e-18
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = -2

Query: 483 PKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPIHNMS 304
           P  YLGV + KG+ K   +  +VDKI+ + S W  S+L I GR  LI+S+  S+ IH ++
Sbjct: 399 PFNYLGVPIFKGKPKARFLQPIVDKIKTKLSNWKASILSIAGRVQLIKSVAQSMLIHTIT 458

Query: 303 IYK*PRSSIKEAE 265
           IY  P   +KE E
Sbjct: 459 IYDWPSFLLKELE 471



 Score = 58.9 bits (141), Expect(2) = 4e-18
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -1

Query: 268 REYNPNIRNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAW 101
           +E     RNF+WSG+   +K V V W  +C P+ QGGLGIR LS +N A  +KL W
Sbjct: 468 KELETCFRNFIWSGDITKRKLVTVAWKKLCKPQSQGGLGIRSLSQLNAAGNLKLCW 523


>ref|XP_009122912.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 660

 Score = 67.4 bits (163), Expect(2) = 5e-18
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
 Frame = -1

Query: 241 FLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWV-QTNDNICSSF 65
           FLWSG PN  KG  V+W  VC PK+ GGLG++RL  +N+   +KL W + + +D++  ++
Sbjct: 269 FLWSGAPNSAKGAKVSWDSVCTPKESGGLGLKRLVGLNELYGVKLIWKLFEGSDSLWVAW 328

Query: 64  LKNKFLKSNGTW---FEYKRSSIW 2
           +K+  ++    W   F  K S IW
Sbjct: 329 IKSHLMEGKMFWVSDFANKGSWIW 352



 Score = 50.1 bits (118), Expect(2) = 5e-18
 Identities = 25/77 (32%), Positives = 44/77 (57%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           +  LP KYLG+ L   R+ ++    ++DK+R+R S+W    L   GR  L+QS++ SI  
Sbjct: 187 QGSLPVKYLGLPLSSRRLGRIGYQPLLDKVRQRISSWTARHLSFAGRLQLLQSVIYSIIN 246

Query: 315 HNMSIYK*PRSSIKEAE 265
              +++  P+  ++E E
Sbjct: 247 FWAAVFPLPQGCLEELE 263


>ref|XP_009103574.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 658

 Score = 67.4 bits (163), Expect(2) = 5e-18
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
 Frame = -1

Query: 241 FLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWV-QTNDNICSSF 65
           FLWSG PN  KG  V+W  VC PK+ GGLG++RL  +N+   +KL W + + +D++  ++
Sbjct: 301 FLWSGAPNSAKGAKVSWDSVCTPKESGGLGLKRLVGLNELYGVKLIWKLFEGSDSLWVAW 360

Query: 64  LKNKFLKSNGTW---FEYKRSSIW 2
           +K+  ++    W   F  K S IW
Sbjct: 361 IKSHLMEGKMFWVSDFANKGSWIW 384



 Score = 50.1 bits (118), Expect(2) = 5e-18
 Identities = 25/77 (32%), Positives = 44/77 (57%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           +  LP KYLG+ L   R+ ++    ++DK+R+R S+W    L   GR  L+QS++ SI  
Sbjct: 219 QGSLPVKYLGLPLSSRRLGRIGYQPLLDKVRQRISSWTARHLSFAGRLQLLQSVIYSIIN 278

Query: 315 HNMSIYK*PRSSIKEAE 265
              +++  P+  ++E E
Sbjct: 279 FWAAVFPLPQGCLEELE 295


>ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430323 [Malus domestica]
          Length = 1380

 Score = 62.8 bits (151), Expect(2) = 9e-18
 Identities = 26/71 (36%), Positives = 44/71 (61%)
 Frame = -2

Query: 486 LPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPIHNM 307
           +P  YLGV + +G+ K++H   +VDK + R S W G +  + GR  L+QS+  S+ +H+ 
Sbjct: 754 VPFTYLGVPIFRGKPKRIHFQALVDKAKARLSGWKGKLXSMAGRFQLVQSVYQSLXLHSF 813

Query: 306 SIYK*PRSSIK 274
           S+Y+ P   +K
Sbjct: 814 SVYQLPSCXLK 824



 Score = 53.9 bits (128), Expect(2) = 9e-18
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247  RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
            RNF+WSG+ + +K V V+W  V  PK +GGLG+R L+ +N    +   W    + ++  S
Sbjct: 831  RNFIWSGDLSSRKLVTVDWSMVXGPKKEGGLGLRDLAXLNLTALLSFGWDALQSYSLWGS 890

Query: 67   FLKNKF-LKSNGTWFEYKRSSIW 2
            F   +F L        Y RSS W
Sbjct: 891  FAXQRFPLSPYRNQNIYLRSSXW 913


>ref|XP_008356537.1| PREDICTED: uncharacterized protein LOC103420255 [Malus domestica]
          Length = 1251

 Score = 65.9 bits (159), Expect(2) = 9e-18
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
 Frame = -1

Query: 247 RNFLWSGNPNIKKGVVVNWHDVCLPKDQGGLGIRRLSYINDALQMKLAWWVQTNDNICSS 68
           RNF+WS     KK V V+W  +C  K++GGLG+R L  +N    +KL   + T D+  S 
Sbjct: 698 RNFIWSXXVTSKKXVTVSWXQICAXKNEGGLGLRDLGXLNXTXLLKLGXLIITTDSPWSI 757

Query: 67  FLKNKFLKSNGTWF--EYKRSSIW 2
           +++ +F K +G  +   Y RSSIW
Sbjct: 758 YJRXRF-KLHGRLYSCSYXRSSIW 780



 Score = 50.8 bits (120), Expect(2) = 9e-18
 Identities = 24/74 (32%), Positives = 40/74 (54%)
 Frame = -2

Query: 495 ESPLPKKYLGVSLVKGRVKKVHMDNMVDKIRKRASAWNGSMLFIQGRNLLIQSILTSIPI 316
           E   P  Y GV +  G+ K+  +  + DK + + + W G +L + GR  L QS   S+ +
Sbjct: 618 EGKXPFVYXGVPIFXGKPKRSXLQALADKAKAKLTGWXGKLLSMAGRVQLTQSXXQSMLL 677

Query: 315 HNMSIYK*PRSSIK 274
           H+ S+YK P S ++
Sbjct: 678 HSFSVYKWPSSLLR 691