BLASTX nr result
ID: Aconitum23_contig00040681
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00040681
(477 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010277093.1| PREDICTED: transcription initiation factor T... 81 5e-18
ref|XP_010277095.1| PREDICTED: transcription initiation factor T... 81 5e-18
ref|XP_010277099.1| PREDICTED: transcription initiation factor T... 81 5e-18
ref|XP_010277096.1| PREDICTED: transcription initiation factor T... 81 1e-15
ref|XP_010272146.1| PREDICTED: transcription initiation factor T... 89 2e-15
ref|XP_010272138.1| PREDICTED: transcription initiation factor T... 89 2e-15
ref|XP_010272131.1| PREDICTED: transcription initiation factor T... 89 2e-15
ref|XP_010272122.1| PREDICTED: transcription initiation factor T... 89 2e-15
ref|XP_010272113.1| PREDICTED: transcription initiation factor T... 89 2e-15
gb|KDO81553.1| hypothetical protein CISIN_1g048675mg [Citrus sin... 70 3e-14
ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citr... 70 3e-14
ref|XP_006472283.1| PREDICTED: transcription initiation factor T... 68 1e-13
ref|XP_009372608.1| PREDICTED: transcription initiation factor T... 59 8e-11
ref|XP_012446631.1| PREDICTED: transcription initiation factor T... 56 1e-10
ref|XP_012446632.1| PREDICTED: transcription initiation factor T... 56 1e-10
gb|KJB59859.1| hypothetical protein B456_009G277000 [Gossypium r... 56 1e-10
ref|XP_008373393.1| PREDICTED: transcription initiation factor T... 58 1e-10
ref|XP_007018536.1| TBP-associated factor 4, putative isoform 1 ... 52 2e-10
ref|XP_007018537.1| TBP-associated factor 4, putative isoform 2 ... 52 2e-10
ref|XP_007018538.1| TBP-associated factor 4, putative isoform 3,... 52 2e-10
>ref|XP_010277093.1| PREDICTED: transcription initiation factor TFIID subunit 4b isoform
X1 [Nelumbo nucifera] gi|720068388|ref|XP_010277094.1|
PREDICTED: transcription initiation factor TFIID subunit
4b isoform X1 [Nelumbo nucifera]
Length = 963
Score = 81.3 bits (199), Expect(2) = 5e-18
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ASQFTD F + HQ PTD ++P + V+ + + E++ Q ++E
Sbjct: 297 KMPSLNASQFTDPLSFAQLHQNSHKSPTDLSRVPTSTVQTQSNSTFSTTENSAQMSKDSE 356
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
Q SQGTH +Q SS++++ + Q+ +L + QGLN ++Q+LHLPQTS
Sbjct: 357 NQLDSQGTHASQISSANMSMIKQEKELPSIPMQGLNKPQQQHLHLPQTS 405
Score = 36.2 bits (82), Expect(2) = 5e-18
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -1
Query: 477 HKDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSPNSSTVSNFFTAATACQN 310
HK+ F R M +IVG +L+QA+ K++MQ+ A +P + + F + T+ Q+
Sbjct: 231 HKEGFIRLMKSIVGDHMLRQALAKVRMQELIKAQASRNPQTGSHHFQFQSQTSSQH 286
>ref|XP_010277095.1| PREDICTED: transcription initiation factor TFIID subunit 4b isoform
X2 [Nelumbo nucifera]
Length = 960
Score = 81.3 bits (199), Expect(2) = 5e-18
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ASQFTD F + HQ PTD ++P + V+ + + E++ Q ++E
Sbjct: 294 KMPSLNASQFTDPLSFAQLHQNSHKSPTDLSRVPTSTVQTQSNSTFSTTENSAQMSKDSE 353
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
Q SQGTH +Q SS++++ + Q+ +L + QGLN ++Q+LHLPQTS
Sbjct: 354 NQLDSQGTHASQISSANMSMIKQEKELPSIPMQGLNKPQQQHLHLPQTS 402
Score = 36.2 bits (82), Expect(2) = 5e-18
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -1
Query: 477 HKDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSPNSSTVSNFFTAATACQN 310
HK+ F R M +IVG +L+QA+ K++MQ+ A +P + + F + T+ Q+
Sbjct: 228 HKEGFIRLMKSIVGDHMLRQALAKVRMQELIKAQASRNPQTGSHHFQFQSQTSSQH 283
>ref|XP_010277099.1| PREDICTED: transcription initiation factor TFIID subunit 4b isoform
X5 [Nelumbo nucifera]
Length = 816
Score = 81.3 bits (199), Expect(2) = 5e-18
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ASQFTD F + HQ PTD ++P + V+ + + E++ Q ++E
Sbjct: 297 KMPSLNASQFTDPLSFAQLHQNSHKSPTDLSRVPTSTVQTQSNSTFSTTENSAQMSKDSE 356
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
Q SQGTH +Q SS++++ + Q+ +L + QGLN ++Q+LHLPQTS
Sbjct: 357 NQLDSQGTHASQISSANMSMIKQEKELPSIPMQGLNKPQQQHLHLPQTS 405
Score = 36.2 bits (82), Expect(2) = 5e-18
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -1
Query: 477 HKDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSPNSSTVSNFFTAATACQN 310
HK+ F R M +IVG +L+QA+ K++MQ+ A +P + + F + T+ Q+
Sbjct: 231 HKEGFIRLMKSIVGDHMLRQALAKVRMQELIKAQASRNPQTGSHHFQFQSQTSSQH 286
>ref|XP_010277096.1| PREDICTED: transcription initiation factor TFIID subunit 4b isoform
X3 [Nelumbo nucifera]
Length = 959
Score = 81.3 bits (199), Expect(2) = 1e-15
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ASQFTD F + HQ PTD ++P + V+ + + E++ Q ++E
Sbjct: 293 KMPSLNASQFTDPLSFAQLHQNSHKSPTDLSRVPTSTVQTQSNSTFSTTENSAQMSKDSE 352
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
Q SQGTH +Q SS++++ + Q+ +L + QGLN ++Q+LHLPQTS
Sbjct: 353 NQLDSQGTHASQISSANMSMIKQEKELPSIPMQGLNKPQQQHLHLPQTS 401
Score = 28.1 bits (61), Expect(2) = 1e-15
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -1
Query: 477 HKDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSPNSSTVSNFFTAATACQN 310
HK+ F R M +IVG +L+QA+ K + K +A++N P + + F + T+ Q+
Sbjct: 231 HKEGFIRLMKSIVGDHMLRQALAK---ELIKAQASRN-PQTGSHHFQFQSQTSSQH 282
>ref|XP_010272146.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X5 [Nelumbo nucifera]
Length = 888
Score = 88.6 bits (218), Expect = 2e-15
Identities = 48/109 (44%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ SQFTD + F + QK Q PTD Q+P + V+++ + + E++ Q+ + E
Sbjct: 217 KMPSLTTSQFTDPHSFSQLQQKSQKSPTDLSQVPTSTVQIQADSNFLTTENSTQRSRDTE 276
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
+QS SQGTHV++ SS++++ V Q+ +L ++ QGLN ++Q+LHLPQTS
Sbjct: 277 SQSDSQGTHVSKMSSANMSMVKQERELPTISVQGLNKQQQQHLHLPQTS 325
>ref|XP_010272138.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X4 [Nelumbo nucifera]
Length = 982
Score = 88.6 bits (218), Expect = 2e-15
Identities = 48/109 (44%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ SQFTD + F + QK Q PTD Q+P + V+++ + + E++ Q+ + E
Sbjct: 311 KMPSLTTSQFTDPHSFSQLQQKSQKSPTDLSQVPTSTVQIQADSNFLTTENSTQRSRDTE 370
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
+QS SQGTHV++ SS++++ V Q+ +L ++ QGLN ++Q+LHLPQTS
Sbjct: 371 SQSDSQGTHVSKMSSANMSMVKQERELPTISVQGLNKQQQQHLHLPQTS 419
>ref|XP_010272131.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X3 [Nelumbo nucifera]
Length = 986
Score = 88.6 bits (218), Expect = 2e-15
Identities = 48/109 (44%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ SQFTD + F + QK Q PTD Q+P + V+++ + + E++ Q+ + E
Sbjct: 315 KMPSLTTSQFTDPHSFSQLQQKSQKSPTDLSQVPTSTVQIQADSNFLTTENSTQRSRDTE 374
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
+QS SQGTHV++ SS++++ V Q+ +L ++ QGLN ++Q+LHLPQTS
Sbjct: 375 SQSDSQGTHVSKMSSANMSMVKQERELPTISVQGLNKQQQQHLHLPQTS 423
>ref|XP_010272122.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X2 [Nelumbo nucifera]
Length = 986
Score = 88.6 bits (218), Expect = 2e-15
Identities = 48/109 (44%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ SQFTD + F + QK Q PTD Q+P + V+++ + + E++ Q+ + E
Sbjct: 315 KMPSLTTSQFTDPHSFSQLQQKSQKSPTDLSQVPTSTVQIQADSNFLTTENSTQRSRDTE 374
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
+QS SQGTHV++ SS++++ V Q+ +L ++ QGLN ++Q+LHLPQTS
Sbjct: 375 SQSDSQGTHVSKMSSANMSMVKQERELPTISVQGLNKQQQQHLHLPQTS 423
>ref|XP_010272113.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Nelumbo nucifera]
Length = 987
Score = 88.6 bits (218), Expect = 2e-15
Identities = 48/109 (44%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Frame = -2
Query: 314 KMPSLSASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-ENE 138
KMPSL+ SQFTD + F + QK Q PTD Q+P + V+++ + + E++ Q+ + E
Sbjct: 316 KMPSLTTSQFTDPHSFSQLQQKSQKSPTDLSQVPTSTVQIQADSNFLTTENSTQRSRDTE 375
Query: 137 TQSASQGTHVNQGSSSSITAVNQKMDL--VAKQGLN--EKQNLHLPQTS 3
+QS SQGTHV++ SS++++ V Q+ +L ++ QGLN ++Q+LHLPQTS
Sbjct: 376 SQSDSQGTHVSKMSSANMSMVKQERELPTISVQGLNKQQQQHLHLPQTS 424
>gb|KDO81553.1| hypothetical protein CISIN_1g048675mg [Citrus sinensis]
Length = 954
Score = 69.7 bits (169), Expect(2) = 3e-14
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 6/110 (5%)
Frame = -2
Query: 314 KMPSLSA--SQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-E 144
+MPS SA SQF+D++ F + +QK N PTD P + ++ S P KE++ QK E
Sbjct: 288 RMPSASAAASQFSDTHSFAQVNQKS-NSPTDPIHGPASSAHVQVGSSYPIKENSAQKSRE 346
Query: 143 NETQSASQGTHVNQGSSSSITAVNQKMDLVA-KQGLN--EKQNLHLPQTS 3
E QSAS G H +Q SSS+ + VNQ+ + + QGLN ++Q+LH PQTS
Sbjct: 347 LEHQSASHGIHGSQISSSTPSTVNQERERSSVVQGLNKQQQQHLHFPQTS 396
Score = 35.0 bits (79), Expect(2) = 3e-14
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSPNSS 352
KDVF R+M +IVG Q+L+ AVNK++ Q + S S+
Sbjct: 242 KDVFVRHMRDIVGDQMLRLAVNKMQSQMGSHQFPSQSQASA 282
>ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citrus clementina]
gi|557535738|gb|ESR46856.1| hypothetical protein
CICLE_v10000177mg [Citrus clementina]
Length = 954
Score = 69.7 bits (169), Expect(2) = 3e-14
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 6/110 (5%)
Frame = -2
Query: 314 KMPSLSA--SQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-E 144
+MPS SA SQF+D++ F + +QK N PTD P + ++ S P KE++ QK E
Sbjct: 288 RMPSASAAASQFSDTHSFAQVNQKS-NSPTDPIHGPASSAHVQVGSSYPIKENSAQKSRE 346
Query: 143 NETQSASQGTHVNQGSSSSITAVNQKMDLVA-KQGLN--EKQNLHLPQTS 3
E QSAS G H +Q SSS+ + VNQ+ + + QGLN ++Q+LH PQTS
Sbjct: 347 LEHQSASHGIHGSQISSSTPSTVNQERERSSVVQGLNKQQQQHLHFPQTS 396
Score = 35.0 bits (79), Expect(2) = 3e-14
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSPNSS 352
KDVF R+M +IVG Q+L+ AVNK++ Q + S S+
Sbjct: 242 KDVFVRHMRDIVGDQMLRLAVNKMQSQMGSHQFPSQSQASA 282
>ref|XP_006472283.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Citrus sinensis]
Length = 955
Score = 67.8 bits (164), Expect(2) = 1e-13
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Frame = -2
Query: 314 KMPSLSA--SQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-E 144
+MPS SA SQF+D++ F + +QK N P D P + ++ S P KE++ QK E
Sbjct: 288 RMPSASAAASQFSDTHSFAQVNQKS-NSPADPIHGPASSAHVQVGSSYPIKENSAQKSRE 346
Query: 143 NETQSASQGTHVNQGSSSSITAVNQKMDLVA-KQGLN--EKQNLHLPQTS 3
E QSAS G H +Q SSS+ + VNQ+ + + QGLN ++Q+LH PQTS
Sbjct: 347 LEHQSASHGIHGSQISSSTPSTVNQERERSSVVQGLNKQQQQHLHFPQTS 396
Score = 35.0 bits (79), Expect(2) = 1e-13
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSPNSS 352
KDVF R+M +IVG Q+L+ AVNK++ Q + S S+
Sbjct: 242 KDVFVRHMRDIVGDQMLRLAVNKMQSQMGSHQFPSQSQASA 282
>ref|XP_009372608.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Pyrus x bretschneideri]
Length = 965
Score = 58.5 bits (140), Expect(2) = 8e-11
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Frame = -2
Query: 314 KMPSLSA--SQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQK-GE 144
+MPS SA +QF D F +Q+G N PTD IP + V+L+ + S E++ +K E
Sbjct: 289 RMPSASAGSTQFADPRSFAL-NQRGTNSPTDPSHIPSSTVQLQSDSSHSVIENSAKKLRE 347
Query: 143 NETQSASQGTHVNQGSSSSITAVNQKMDLVA--KQGLN-EKQNLHLPQTS 3
E QS S G V+Q SSSS+ A NQ+ + + Q LN ++Q L PQ+S
Sbjct: 348 AERQSDSHGMQVSQMSSSSVVAGNQERERSSGPMQILNKQQQQLQYPQSS 397
Score = 34.7 bits (78), Expect(2) = 8e-11
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQQTKT 382
KD F R++ ++VG Q+LK AV K++ Q TKT
Sbjct: 238 KDAFVRHIRSVVGDQMLKLAVMKVQSQHTKT 268
>ref|XP_012446631.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Gossypium raimondii]
gi|763792861|gb|KJB59857.1| hypothetical protein
B456_009G277000 [Gossypium raimondii]
Length = 940
Score = 55.8 bits (133), Expect(2) = 1e-10
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Frame = -2
Query: 314 KMPSLS-ASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKGEN- 141
+MPS+ A+QF + ++ HQKG N P + +P V ++ S + E+ QK ++
Sbjct: 288 RMPSVGGATQFAGPHSLVQLHQKGPNSPANSSHVPSTAVPMQTNSSYLSGENKAQKSQDM 347
Query: 140 ETQSASQ-GTHVNQGSSSSITAVNQK--MDLVAKQGLNEKQNLHL--PQTS 3
+ QS S+ G +Q SSS T VNQ+ + QG+N++Q HL PQTS
Sbjct: 348 DRQSDSRFGMLGSQISSSGSTTVNQERGRPSIPAQGINKQQQQHLNFPQTS 398
Score = 37.0 bits (84), Expect(2) = 1e-10
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSP 361
KD F R+M +IVG Q+L+ AVNKL++Q + + SP
Sbjct: 242 KDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSP 279
>ref|XP_012446632.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X2 [Gossypium raimondii]
gi|763792862|gb|KJB59858.1| hypothetical protein
B456_009G277000 [Gossypium raimondii]
Length = 939
Score = 55.8 bits (133), Expect(2) = 1e-10
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Frame = -2
Query: 314 KMPSLS-ASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKGEN- 141
+MPS+ A+QF + ++ HQKG N P + +P V ++ S + E+ QK ++
Sbjct: 287 RMPSVGGATQFAGPHSLVQLHQKGPNSPANSSHVPSTAVPMQTNSSYLSGENKAQKSQDM 346
Query: 140 ETQSASQ-GTHVNQGSSSSITAVNQK--MDLVAKQGLNEKQNLHL--PQTS 3
+ QS S+ G +Q SSS T VNQ+ + QG+N++Q HL PQTS
Sbjct: 347 DRQSDSRFGMLGSQISSSGSTTVNQERGRPSIPAQGINKQQQQHLNFPQTS 397
Score = 37.0 bits (84), Expect(2) = 1e-10
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSP 361
KD F R+M +IVG Q+L+ AVNKL++Q + + SP
Sbjct: 241 KDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSP 278
>gb|KJB59859.1| hypothetical protein B456_009G277000 [Gossypium raimondii]
Length = 893
Score = 55.8 bits (133), Expect(2) = 1e-10
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Frame = -2
Query: 314 KMPSLS-ASQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKGEN- 141
+MPS+ A+QF + ++ HQKG N P + +P V ++ S + E+ QK ++
Sbjct: 288 RMPSVGGATQFAGPHSLVQLHQKGPNSPANSSHVPSTAVPMQTNSSYLSGENKAQKSQDM 347
Query: 140 ETQSASQ-GTHVNQGSSSSITAVNQK--MDLVAKQGLNEKQNLHL--PQTS 3
+ QS S+ G +Q SSS T VNQ+ + QG+N++Q HL PQTS
Sbjct: 348 DRQSDSRFGMLGSQISSSGSTTVNQERGRPSIPAQGINKQQQQHLNFPQTS 398
Score = 37.0 bits (84), Expect(2) = 1e-10
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQQTKTEAAQNSP 361
KD F R+M +IVG Q+L+ AVNKL++Q + + SP
Sbjct: 242 KDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSP 279
>ref|XP_008373393.1| PREDICTED: transcription initiation factor TFIID subunit 4b [Malus
domestica]
Length = 948
Score = 57.8 bits (138), Expect(2) = 1e-10
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Frame = -2
Query: 314 KMPSLSA--SQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQK-GE 144
KMPS +A +QF D F +Q+G N PTD IP + V+L+ + S E++ +K E
Sbjct: 272 KMPSATAGSTQFPDPRSFAL-NQRGTNSPTDPSHIPSSTVQLQSDSSHSVIENSAKKLRE 330
Query: 143 NETQSASQGTHVNQGSSSSITAVNQKMDLVA--KQGLNEKQN-LHLPQTS 3
E QS S G V+Q SSSS+ A NQ+ + + Q LN++Q L PQ+S
Sbjct: 331 AERQSDSHGMQVSQMSSSSVVAGNQERERSSGPMQILNKQQQPLQYPQSS 380
Score = 34.7 bits (78), Expect(2) = 1e-10
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQQTKT 382
KD F R++ ++VG Q+LK AV K++ Q TKT
Sbjct: 221 KDAFVRHIRSVVGDQMLKLAVMKVQSQHTKT 251
>ref|XP_007018536.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
gi|508723864|gb|EOY15761.1| TBP-associated factor 4,
putative isoform 1 [Theobroma cacao]
Length = 950
Score = 52.4 bits (124), Expect(2) = 2e-10
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Frame = -2
Query: 314 KMPSLSA--SQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-E 144
+MPS+SA +QF + + QKG N P + P V ++ S + E+ K E
Sbjct: 288 RMPSVSAGATQFAGPHSLAQLQQKGPNSPATPSRAPSPAVPMQTNSSYSSTENKAPKSQE 347
Query: 143 NETQSASQ-GTHVNQGSSSSITAVNQKMD--LVAKQGLNEKQNLHL--PQTS 3
+ QS S+ G +Q SS S T VNQ+ D + QGLN++Q HL PQTS
Sbjct: 348 MDRQSDSRFGVLGSQISSFSTTTVNQERDRSSIPVQGLNKQQQQHLNFPQTS 399
Score = 39.7 bits (91), Expect(2) = 2e-10
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 8/52 (15%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQ--------QTKTEAAQNSPNSSTVS 343
KD F R+M +IVG Q+L+ AVNKL++Q Q++ A QN+P +VS
Sbjct: 242 KDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSQAAARQNTPRMPSVS 293
>ref|XP_007018537.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
gi|508723865|gb|EOY15762.1| TBP-associated factor 4,
putative isoform 2 [Theobroma cacao]
Length = 944
Score = 52.4 bits (124), Expect(2) = 2e-10
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Frame = -2
Query: 314 KMPSLSA--SQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-E 144
+MPS+SA +QF + + QKG N P + P V ++ S + E+ K E
Sbjct: 288 RMPSVSAGATQFAGPHSLAQLQQKGPNSPATPSRAPSPAVPMQTNSSYSSTENKAPKSQE 347
Query: 143 NETQSASQ-GTHVNQGSSSSITAVNQKMD--LVAKQGLNEKQNLHL--PQTS 3
+ QS S+ G +Q SS S T VNQ+ D + QGLN++Q HL PQTS
Sbjct: 348 MDRQSDSRFGVLGSQISSFSTTTVNQERDRSSIPVQGLNKQQQQHLNFPQTS 399
Score = 39.7 bits (91), Expect(2) = 2e-10
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 8/52 (15%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQ--------QTKTEAAQNSPNSSTVS 343
KD F R+M +IVG Q+L+ AVNKL++Q Q++ A QN+P +VS
Sbjct: 242 KDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSQAAARQNTPRMPSVS 293
>ref|XP_007018538.1| TBP-associated factor 4, putative isoform 3, partial [Theobroma
cacao] gi|508723866|gb|EOY15763.1| TBP-associated factor
4, putative isoform 3, partial [Theobroma cacao]
Length = 707
Score = 52.4 bits (124), Expect(2) = 2e-10
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Frame = -2
Query: 314 KMPSLSA--SQFTDSYPFLRPHQKGQNGPTDQRQIPIAMVELKREFSCPAKESNVQKG-E 144
+MPS+SA +QF + + QKG N P + P V ++ S + E+ K E
Sbjct: 287 RMPSVSAGATQFAGPHSLAQLQQKGPNSPATPSRAPSPAVPMQTNSSYSSTENKAPKSQE 346
Query: 143 NETQSASQ-GTHVNQGSSSSITAVNQKMD--LVAKQGLNEKQNLHL--PQTS 3
+ QS S+ G +Q SS S T VNQ+ D + QGLN++Q HL PQTS
Sbjct: 347 MDRQSDSRFGVLGSQISSFSTTTVNQERDRSSIPVQGLNKQQQQHLNFPQTS 398
Score = 39.7 bits (91), Expect(2) = 2e-10
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 8/52 (15%)
Frame = -1
Query: 474 KDVFARNMGNIVGYQILKQAVNKLKMQ--------QTKTEAAQNSPNSSTVS 343
KD F R+M +IVG Q+L+ AVNKL++Q Q++ A QN+P +VS
Sbjct: 241 KDGFVRHMRDIVGDQMLRLAVNKLQVQMSSNQFPLQSQAAARQNTPRMPSVS 292