BLASTX nr result

ID: Aconitum23_contig00039854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00039854
         (444 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]    42   1e-06
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    44   3e-06
emb|CAN60637.1| hypothetical protein VITISV_022223 [Vitis vinifera]    43   6e-06
gb|KHN42568.1| Putative ribonuclease H protein, partial [Glycine...    49   8e-06

>emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]
          Length = 873

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = -3

Query: 439 ALLSKWPWRYSQEHGALWRKIIQDKYGSPNSSNWLLDRRPTNFRASLWLPIMALNQ 272
           ALL KW WR++ E  ALW ++I+ KYG         + R   +   LW  I  + Q
Sbjct: 168 ALLGKWAWRFANEKAALWNQVIRRKYGEEKGGXRSCEIREA-YGVGLWKAINKVGQ 222



 Score = 36.6 bits (83), Expect(2) = 1e-06
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = -2

Query: 257 HKVDDGQNTSFWNDR*LST-LLKE*YPDLYAISNQKHLKVAEMVDRDTVPAQGA*NVTFN 81
           ++V DG+N  FW D+   T LL E +P L++I+  K   V E+   +    +G+   TFN
Sbjct: 230 YEVGDGKNVRFWKDKWCGTSLLSEAFPSLFSIATSKEAWVNEVWTAEG-DRRGSWTPTFN 288

Query: 80  R 78
           R
Sbjct: 289 R 289


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 43.9 bits (102), Expect(2) = 3e-06
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = -3

Query: 439  ALLSKWPWRYSQEHGALWRKIIQDKYG 359
            ALLSKW WRY+ E  ALW ++I+ KYG
Sbjct: 1502 ALLSKWNWRYANEREALWNQVIRGKYG 1528



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -2

Query: 263  VRHKVDDGQNTSFWNDR*LSTL-LKE*YPDLYAISNQKHLKVAEMVDRDTVPAQGA*NVT 87
            +   V +G+  SFW DR      L + +P +YA+S +K   VA++ D      +G  N  
Sbjct: 1562 ISFSVGNGRRVSFWRDRWCGXAPLCDSFPSIYALSIEKEAWVADVWDPLVQGGRGGWNPC 1621

Query: 86   FNR 78
            F+R
Sbjct: 1622 FSR 1624


>emb|CAN60637.1| hypothetical protein VITISV_022223 [Vitis vinifera]
          Length = 1887

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 439  ALLSKWPWRYSQEHGALWRKIIQDKYGSPNSSNWLLDRRPTNFRASLWLPIMALNQQ 269
            ALL KW WR++ E  ALW ++I+ KYG      W        +   LW  I  +  Q
Sbjct: 1668 ALLGKWVWRFANERKALWNQVIRGKYGE-ERGGWRSCESREAYGFGLWKAISKMGHQ 1723



 Score = 33.9 bits (76), Expect(2) = 6e-06
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 284  GTQPTVPVRHKVDDGQNTSFWNDR*LSTL-LKE*YPDLYAISNQKHLKVAEM 132
            G Q T  V   V DG+   FW D+   T+ L E +P L+A+++ K   V E+
Sbjct: 1721 GHQVTPFVGFVVGDGEKVKFWKDKWCETIPLSEAFPSLFALASNKEAWVNEV 1772


>gb|KHN42568.1| Putative ribonuclease H protein, partial [Glycine soja]
          Length = 375

 Score = 49.3 bits (116), Expect(2) = 8e-06
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
 Frame = -3

Query: 442 SALLSKWPWRYSQEHGALWRKIIQDKYGSPNSSNWLLDRRPTNFRASLWLPIMALNQQ-- 269
           +ALL+KW W   Q+HG LW +I+  KYG   +   L D R +++ +S W  ++ LN Q  
Sbjct: 88  TALLAKWKWELFQQHGDLWSRILISKYGGWRA---LDDTRRSSYFSSWWKGLLQLNHQQH 144

Query: 268 ---FQSDIRW 248
              F++   W
Sbjct: 145 VAVFKNQTEW 154



 Score = 26.9 bits (58), Expect(2) = 8e-06
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -2

Query: 254 KVDDGQNTSFWNDR*L----STLLKE*YPDLYAISNQKH 150
           +V  G    FW D  +    S ++K  YP LY ISNQ+H
Sbjct: 155 RVGSGDKFIFWEDSWVDAGVSLMVK--YPRLYNISNQQH 191


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