BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00039820
         (842 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...   417   e-114
ref|XP_010270183.1| PREDICTED: pentatricopeptide repeat-containi...   409   e-111
gb|KCW77096.1| hypothetical protein EUGRSUZ_D01436 [Eucalyptus g...   387   e-105
ref|XP_010938918.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100
gb|KQK15018.1| hypothetical protein BRADI_1g20150 [Brachypodium ...   285   2e-74
gb|AGT16296.1| pentatricopeptide repeat-containing protein [Sacc...   284   6e-74
ref|XP_012699236.1| PREDICTED: pentatricopeptide repeat-containi...   283   1e-73
ref|XP_006658876.1| PREDICTED: pentatricopeptide repeat-containi...   277   6e-72
ref|XP_008670604.1| PREDICTED: pentatricopeptide repeat-containi...   276   1e-71
tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea m...   276   1e-71
gb|EMS46161.1| hypothetical protein TRIUR3_10442 [Triticum urartu]    265   4e-68
gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japo...   257   8e-66
ref|XP_010234994.1| PREDICTED: pentatricopeptide repeat-containi...   256   1e-65
ref|XP_008807797.1| PREDICTED: pentatricopeptide repeat-containi...   247   9e-63
ref|XP_010052946.1| PREDICTED: pentatricopeptide repeat-containi...   246   1e-62
gb|AGT16322.1| pentatricopeptide repeat-containing protein [Sacc...   246   2e-62
emb|CDO96870.1| unnamed protein product [Coffea canephora]            244   4e-62
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   244   6e-62
ref|XP_007025291.1| Pentatricopeptide repeat (PPR-like) superfam...   239   2e-60
ref|XP_012484752.1| PREDICTED: pentatricopeptide repeat-containi...   238   3e-60

>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  417 bits (1072), Expect = e-114
 Identities = 202/280 (72%), Positives = 242/280 (86%)
 Frame = -1

Query: 842 NPQESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQ 663
           NPQESMSLFFQMR QE   +DS+SLSLV+QACGR  +  NG+++HT V+K+G G DLFV+
Sbjct: 84  NPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVE 143

Query: 662 TALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLI 483
           TAL+EMYAK G  E+AR IL EM  PD+  YNVLLAEYVR GEI+LA  LFD+MP+RDL+
Sbjct: 144 TALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLV 203

Query: 482 SWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLAN 303
           SWNTMIHG+A+ G+VG A++LFD +  RDL+SWSSMIA YAK+RQSNEALRLFH MQLAN
Sbjct: 204 SWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLAN 263

Query: 302 VRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSL 123
           V PDKVT+VS+LSACGD+GALGMGK+IHE IERN+I++D+KLGTSLVDMYAKCGDI+NSL
Sbjct: 264 VLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSL 323

Query: 122 KIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           ++F+ M  +DV  WSAMI+GLANHG GELALDHFS+MISE
Sbjct: 324 RVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISE 363



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 47/213 (22%), Positives = 101/213 (47%), Gaps = 10/213 (4%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRN----GEIDLARQLF 510
           DL   ++++  YAK   +  A ++  EM   +V    V +   +      G + + + + 
Sbjct: 232 DLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIH 291

Query: 509 DKMPKR----DLISWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSN 342
           + + +     DL    +++  YA CG++  + ++F+  + RD+ +WS+MI G A      
Sbjct: 292 ECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGE 351

Query: 341 EALRLFHNMQLANVRPDKVTLVSILSACGDIGALGMGKIIHEYIER-NQIQVDVKLGTSL 165
            AL  F  M   +++P+ VT + +LSAC  IG +  G      + +   +   ++    +
Sbjct: 352 LALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCV 411

Query: 164 VDMYAKCGDIENSLKIFDVMG-VKDVLTWSAMI 69
           VD+  + G ++ ++++   M    D + W A++
Sbjct: 412 VDILGRAGRLQEAMELIKSMPFAPDAIVWRALL 444



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 9/201 (4%)
 Frame = -1

Query: 833 ESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQTAL 654
           E++ LF +M+L    + D  ++  VL ACG       G+ +H  + +    +DL + T+L
Sbjct: 251 EALRLFHEMQLAN-VLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSL 309

Query: 653 VEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWN 474
           V+MYAK G  + + ++ + M+  DVF+++ ++     +G  +LA   F KM   D+   +
Sbjct: 310 VDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPND 369

Query: 473 -TMIHGYATCGNVGAARQ----LFDMSSVRD----LVSWSSMIAGYAKSRQSNEALRLFH 321
            T I   + C ++G   +       MS V D    +  +  ++    ++ +  EA+ L  
Sbjct: 370 VTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIK 429

Query: 320 NMQLANVRPDKVTLVSILSAC 258
           +M  A   PD +   ++L AC
Sbjct: 430 SMPFA---PDAIVWRALLGAC 447


>ref|XP_010270183.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Nelumbo nucifera]
          Length = 722

 Score =  409 bits (1052), Expect = e-111
 Identities = 201/280 (71%), Positives = 240/280 (85%)
 Frame = -1

Query: 842  NPQESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQ 663
            NP+ES+SLFFQM+LQ    +DSFSLSLV+QACGRS +  NG RVHT ++KLGF  DLFVQ
Sbjct: 166  NPRESISLFFQMQLQLRIPVDSFSLSLVVQACGRSHDTWNGFRVHTQILKLGFSSDLFVQ 225

Query: 662  TALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLI 483
            TAL+EMY+K G   +ARKIL EM++PD+ SYNVLL+EYV+ GEI+LAR LFD MP +DL+
Sbjct: 226  TALIEMYSKFGDMVIARKILDEMNEPDLVSYNVLLSEYVKAGEIELARHLFDNMPNKDLV 285

Query: 482  SWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLAN 303
            SWNTMIHGYA  G+V +AR+LFD    RDLVSWSSMI+ YAKSRQSNEALRLFH+MQLA 
Sbjct: 286  SWNTMIHGYAAHGSVASARKLFDACIQRDLVSWSSMISAYAKSRQSNEALRLFHDMQLAK 345

Query: 302  VRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSL 123
            V PD +T+VS+LSACGDIGALGMGK++HEYIER+ I++DVKLGTSLVDMYAKCGDI+NSL
Sbjct: 346  VMPDGITMVSVLSACGDIGALGMGKMVHEYIERSGIKIDVKLGTSLVDMYAKCGDIDNSL 405

Query: 122  KIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
             +F  M VKDVLTWS+MI+GLANHGLGE+ALD+F +M  E
Sbjct: 406  VVFSKMDVKDVLTWSSMIMGLANHGLGEVALDYFLKMTEE 445



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 43/258 (16%)
 Frame = -1

Query: 677  DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
            DL     ++  YA  G+   ARK+     Q D+ S++ +++ Y ++ + + A +LF  M 
Sbjct: 283  DLVSWNTMIHGYAAHGSVASARKLFDACIQRDLVSWSSMISAYAKSRQSNEALRLFHDMQ 342

Query: 497  ---------------------------------------KRDLISWNTMIHGYATCGNVG 435
                                                   K D+    +++  YA CG++ 
Sbjct: 343  LAKVMPDGITMVSVLSACGDIGALGMGKMVHEYIERSGIKIDVKLGTSLVDMYAKCGDID 402

Query: 434  AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
             +  +F    V+D+++WSSMI G A       AL  F  M    + P+ +T V +L+AC 
Sbjct: 403  NSLVVFSKMDVKDVLTWSSMIMGLANHGLGEVALDYFLKMTEEGINPNDITFVGVLTACS 462

Query: 254  DIGALGMGKIIHEYIERNQIQ-VDVKLG--TSLVDMYAKCGDIENSLKIFDVMG-VKDVL 87
             +G +  G     +   N +  V  KL     +VD+  + G ++++ ++   M    D +
Sbjct: 463  HVGLISKGWAF--FTSMNDVYGVTPKLEHYGCMVDILGRAGHLQDARELIKSMPFAPDAI 520

Query: 86   TWSAMIIGLANHGLGELA 33
             W  ++     H   ELA
Sbjct: 521  VWRTLLSACRVHKNVELA 538



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
 Frame = -1

Query: 428 RQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQL-ANVRPDKVTLVSILSACGD 252
           R LFD     D   W++MI  Y  +    E++ LF  MQL   +  D  +L  ++ ACG 
Sbjct: 140 RLLFDSIPYPDTFIWNTMIRAYLDAHNPRESISLFFQMQLQLRIPVDSFSLSLVVQACGR 199

Query: 251 IGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKDVLTWSAM 72
                 G  +H  I +     D+ + T+L++MY+K GD+  + KI D M   D+++++ +
Sbjct: 200 SHDTWNGFRVHTQILKLGFSSDLFVQTALIEMYSKFGDMVIARKILDEMNEPDLVSYNVL 259

Query: 71  IIGLANHGLGELALDHFSRM 12
           +      G  ELA   F  M
Sbjct: 260 LSEYVKAGEIELARHLFDNM 279



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 9/201 (4%)
 Frame = -1

Query: 833 ESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQTAL 654
           E++ LF  M+L +  + D  ++  VL ACG       G+ VH ++ + G  +D+ + T+L
Sbjct: 333 EALRLFHDMQLAK-VMPDGITMVSVLSACGDIGALGMGKMVHEYIERSGIKIDVKLGTSL 391

Query: 653 VEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWN 474
           V+MYAK G  + +  + S+MD  DV +++ ++     +G  ++A   F KM +  +   +
Sbjct: 392 VDMYAKCGDIDNSLVVFSKMDVKDVLTWSSMIMGLANHGLGEVALDYFLKMTEEGINPND 451

Query: 473 TMIHGYAT-CGNVG-AARQLFDMSSVRD-------LVSWSSMIAGYAKSRQSNEALRLFH 321
               G  T C +VG  ++     +S+ D       L  +  M+    ++    +A  L  
Sbjct: 452 ITFVGVLTACSHVGLISKGWAFFTSMNDVYGVTPKLEHYGCMVDILGRAGHLQDARELIK 511

Query: 320 NMQLANVRPDKVTLVSILSAC 258
           +M  A   PD +   ++LSAC
Sbjct: 512 SMPFA---PDAIVWRTLLSAC 529



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
 Frame = -1

Query: 521 RQLFDKMPKRDLISWNTMIHGYATCGNVGAARQLFDMSSVR-----DLVSWSSMIAGYAK 357
           R LFD +P  D   WNTMI  Y    N   +  LF    ++     D  S S ++    +
Sbjct: 140 RLLFDSIPYPDTFIWNTMIRAYLDAHNPRESISLFFQMQLQLRIPVDSFSLSLVVQACGR 199

Query: 356 SRQSNEALRLFHNMQLANVRPD---KVTLVSILSACGDIGALGMGKIIHEYIERNQIQVD 186
           S  +    R+   +       D   +  L+ + S  GD+  +   KI+ E  E + +  +
Sbjct: 200 SHDTWNGFRVHTQILKLGFSSDLFVQTALIEMYSKFGDM--VIARKILDEMNEPDLVSYN 257

Query: 185 VKLGTSLVDMYAKCGDIENSLKIFDVMGVKDVLTWSAMIIGLANHG 48
           V     L+  Y K G+IE +  +FD M  KD+++W+ MI G A HG
Sbjct: 258 V-----LLSEYVKAGEIELARHLFDNMPNKDLVSWNTMIHGYAAHG 298


>gb|KCW77096.1| hypothetical protein EUGRSUZ_D01436 [Eucalyptus grandis]
          Length = 565

 Score =  387 bits (995), Expect = e-105
 Identities = 186/279 (66%), Positives = 237/279 (84%)
 Frame = -1

Query: 839 PQESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQT 660
           P+E++SLF +MR ++G   DSFSLSLV+QACGR ++  NGR VH   +K+GF  DLFVQT
Sbjct: 10  PRETLSLFLRMRRRDGVFCDSFSLSLVVQACGRLMDGDNGRTVHAQGIKIGFESDLFVQT 69

Query: 659 ALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLIS 480
           AL+EMYAKLG+ E++++IL ++++PD+ S+NVLLAEYVR GEI LAR LFDKM +RDL+S
Sbjct: 70  ALIEMYAKLGSVEISKRILDDLEEPDLVSFNVLLAEYVRIGEIQLARDLFDKMLERDLVS 129

Query: 479 WNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANV 300
           WNTMIHGYAT G+V  AR+LFD +  RD+VSWSSMI  YA++RQSNEAL+LFH MQLANV
Sbjct: 130 WNTMIHGYATLGDVMEARKLFDDARERDVVSWSSMIGAYARTRQSNEALKLFHEMQLANV 189

Query: 299 RPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLK 120
            PD +T+VS+L+ACGDIGALGMGK+IHEYI+R +I+VD+KLGTSLVDMYAKCGDI++SL+
Sbjct: 190 VPDNITMVSVLAACGDIGALGMGKMIHEYIKRTRIEVDMKLGTSLVDMYAKCGDIDSSLR 249

Query: 119 IFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           +F+ M  +DVLTWS+ I+GLANHG G+ AL  FS MI+E
Sbjct: 250 VFNQMDRRDVLTWSSAILGLANHGSGQAALQFFSEMIAE 288



 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           DL     ++  YA LG    ARK+  +  + DV S++ ++  Y R  + + A +LF +M 
Sbjct: 126 DLVSWNTMIHGYATLGDVMEARKLFDDARERDVVSWSSMIGAYARTRQSNEALKLFHEMQ 185

Query: 497 KRDLISWNT-------------------MIHGY--------------------ATCGNVG 435
             +++  N                    MIH Y                    A CG++ 
Sbjct: 186 LANVVPDNITMVSVLAACGDIGALGMGKMIHEYIKRTRIEVDMKLGTSLVDMYAKCGDID 245

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
           ++ ++F+    RD+++WSS I G A       AL+ F  M    + PD +  V +LSAC 
Sbjct: 246 SSLRVFNQMDRRDVLTWSSAILGLANHGSGQAALQFFSEMIAEGIEPDDMAFVGVLSACS 305

Query: 254 DIGALGMGKIIHEYI-ERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMG-VKDVLTW 81
            +G +  G+     + +   I   ++    +VD+ A+ G ++ + ++   M    D + W
Sbjct: 306 HMGLVDEGRTYFTLMSDVYGIAPKMEHYGCMVDILARAGRLQEARELIRKMPFAPDAVVW 365

Query: 80  SAMIIGLANHGLGELA 33
            A++ G   +   +LA
Sbjct: 366 RALLGGCRVYKESDLA 381


>ref|XP_010938918.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Elaeis guineensis]
          Length = 653

 Score =  370 bits (949), Expect = e-100
 Identities = 181/279 (64%), Positives = 227/279 (81%)
 Frame = -1

Query: 839 PQESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQT 660
           P ES+ LF +MRL+EG  +DSFS+SL LQACGRS     GR +HTH++K+GF  DLFVQT
Sbjct: 98  PVESLHLFHKMRLREGVTVDSFSISLALQACGRSGESTIGRAIHTHLLKVGFVSDLFVQT 157

Query: 659 ALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLIS 480
           ALVEMYAK+G   +AR++  EM + D+ SYNV+LAEYV    +  AR+LFD+MP RDL+S
Sbjct: 158 ALVEMYAKVGDVSIARRVFDEMPERDLVSYNVMLAEYVGCDNVQEARRLFDEMPDRDLVS 217

Query: 479 WNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANV 300
           WNTMIHGYA  G++ AA+Q+FD +  +DL SWS MI+ YA+SRQS+EALRLF  MQLANV
Sbjct: 218 WNTMIHGYAMSGDLHAAQQIFDRTHEKDLFSWSLMISAYAQSRQSSEALRLFREMQLANV 277

Query: 299 RPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLK 120
            PDKVT+VS+LSACGD+GAL MGK+IH +IER  ++VD++LGTSLVDMYAKCGDI++SL 
Sbjct: 278 VPDKVTMVSVLSACGDLGALSMGKVIHRFIERKVMEVDLRLGTSLVDMYAKCGDIDSSLG 337

Query: 119 IFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           +F  +  +DVLTWS+MIIGLANHGLG +ALD FS+MISE
Sbjct: 338 VFLKLSERDVLTWSSMIIGLANHGLGMVALDFFSKMISE 376



 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
 Frame = -1

Query: 428 RQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQL-ANVRPDKVTLVSILSACGD 252
           R +FD     D   W+++I  Y +S++  E+L LFH M+L   V  D  ++   L ACG 
Sbjct: 71  RSIFDRIHAPDTFLWNTLIRAYLQSQEPVESLHLFHKMRLREGVTVDSFSISLALQACGR 130

Query: 251 IGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKDVLTWSAM 72
            G   +G+ IH ++ +     D+ + T+LV+MYAK GD+  + ++FD M  +D+++++ M
Sbjct: 131 SGESTIGRAIHTHLLKVGFVSDLFVQTALVEMYAKVGDVSIARRVFDEMPERDLVSYNVM 190

Query: 71  I 69
           +
Sbjct: 191 L 191



 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 41/264 (15%)
 Frame = -1

Query: 677  DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
            DL     ++  YA  G    A++I     + D+FS++++++ Y ++ +   A +LF +M 
Sbjct: 214  DLVSWNTMIHGYAMSGDLHAAQQIFDRTHEKDLFSWSLMISAYAQSRQSSEALRLFREMQ 273

Query: 497  KRDLI-------------------SWNTMIHG--------------------YATCGNVG 435
              +++                   S   +IH                     YA CG++ 
Sbjct: 274  LANVVPDKVTMVSVLSACGDLGALSMGKVIHRFIERKVMEVDLRLGTSLVDMYAKCGDID 333

Query: 434  AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
            ++  +F   S RD+++WSSMI G A       AL  F  M    ++P+++T V +L ACG
Sbjct: 334  SSLGVFLKLSERDVLTWSSMIIGLANHGLGMVALDFFSKMISEQMKPNEITFVGVLMACG 393

Query: 254  DIGALGMGKI-IHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLK-IFDVMGVKDVLTW 81
              G +  G+   +   + + I   ++    +VD+  + G IE + + I D+    D + W
Sbjct: 394  HAGLVSEGRAHFNSMSDVHGISPTIEHYGCMVDLLGRAGHIEEARQFIKDMPFEPDAVVW 453

Query: 80   SAMIIGLANHGLGELALDHFSRMI 9
             A++     H   E+A +  ++++
Sbjct: 454  RALLGACRIHKNVEVAEEAIAKLV 477


>gb|KQK15018.1| hypothetical protein BRADI_1g20150 [Brachypodium distachyon]
          Length = 595

 Score =  285 bits (730), Expect = 2e-74
 Identities = 151/270 (55%), Positives = 191/270 (70%), Gaps = 8/270 (2%)
 Frame = -1

Query: 788 ILDSFSLSLVLQACGRSVNE*N-----GRRVHTHVVKLGFGL-DLFVQTALVEMYAKLGT 627
           + +SFSLSL LQA   + +        G  +H   ++ GF   DLFV+TALVEMYAK   
Sbjct: 49  LANSFSLSLALQAAAAAASSAPALLGLGASLHARALRSGFAAADLFVRTALVEMYAKTAA 108

Query: 626 AEVA--RKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWNTMIHGYA 453
            E+A  R    E  + DVF  NV+LA YV  GE+  AR++FD M  RDL+SWNTMIHGYA
Sbjct: 109 GEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWNTMIHGYA 168

Query: 452 TCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVS 273
             G+VG AR++FD +  RD  SWSSMI+ YAK R S EAL L+  M++A V PD +++VS
Sbjct: 169 VRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVS 228

Query: 272 ILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKD 93
           +LSAC  +GAL +G  +H ++E N+++VD+KLGT+LVDMYAKCGDIENSLK+F  M VKD
Sbjct: 229 VLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKD 288

Query: 92  VLTWSAMIIGLANHGLGELALDHFSRMISE 3
           VLTWS+MIIGLANHGLG  AL  FS MIS+
Sbjct: 289 VLTWSSMIIGLANHGLGHDALSLFSEMISQ 318



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 10/232 (4%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMD----QPDVFSYNVLLAEYVRNGEIDLARQLF 510
           D F  ++++  YAK   ++ A ++  EM      PD  S   +L+     G + +  ++ 
Sbjct: 187 DAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVH 246

Query: 509 DKMPKR----DLISWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSN 342
             +       D+     ++  YA CG++  + ++F    V+D+++WSSMI G A     +
Sbjct: 247 RFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGH 306

Query: 341 EALRLFHNMQLANVRPDKVTLVSILSACGDIGALGMG-KIIHEYIERNQIQVDVKLGTSL 165
           +AL LF  M    ++P+++T + +L AC  +G +  G K      + + +   ++    +
Sbjct: 307 DALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCM 366

Query: 164 VDMYAKCGDIENSLKIFDVMGVK-DVLTWSAMIIGLANHGLGELALDHFSRM 12
           VD+  + G +E ++++   M  K D + W  ++     H   E+A +  +++
Sbjct: 367 VDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKL 418


>gb|AGT16296.1| pentatricopeptide repeat-containing protein [Saccharum hybrid
           cultivar R570]
          Length = 610

 Score =  284 bits (726), Expect = 6e-74
 Identities = 151/269 (56%), Positives = 192/269 (71%), Gaps = 9/269 (3%)
 Frame = -1

Query: 782 DSFSLSLVLQACGR---SVNE*NG-----RRVHTHVVKLGFGL-DLFVQTALVEMYAKLG 630
           +SFSLSL LQA      SV    G       +H   +K GF   DLFV+TALVE YAK G
Sbjct: 65  NSFSLSLALQATAALSGSVPAMLGLGLGAASLHARALKSGFAAADLFVRTALVEAYAKAG 124

Query: 629 TAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWNTMIHGYAT 450
            A++AR    E  + DVF  NV+LA YV  GE+  AR++FD M +RD++SWNTMIHGYA 
Sbjct: 125 GADLARAAFDEAPRRDVFLCNVMLAVYVARGEVAEARRVFDGMRERDMVSWNTMIHGYAV 184

Query: 449 CGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSI 270
            G V  AR++FD   VRD  SWSSM++ YAK R+S +AL L+  M+ A V PD +T+VS+
Sbjct: 185 NGEVALAREMFDGMQVRDAFSWSSMMSAYAKGRRSKDALELWREMRAACVNPDCITMVSV 244

Query: 269 LSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKDV 90
           LSACGD+GAL +G  +H+++  N +++DVKLGT+L+DMYAKCGDIENS+++F  M VKDV
Sbjct: 245 LSACGDMGALTVGAEVHQFVGSNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDV 304

Query: 89  LTWSAMIIGLANHGLGELALDHFSRMISE 3
           LTWS+MIIGLANHGLG  AL  FSRM+SE
Sbjct: 305 LTWSSMIIGLANHGLGHDALSLFSRMLSE 333



 Score = 68.2 bits (165), Expect = 7e-09
 Identities = 52/244 (21%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           D+     ++  YA  G   +AR++   M   D FS++ +++ Y +      A +L+ +M 
Sbjct: 171 DMVSWNTMIHGYAVNGEVALAREMFDGMQVRDAFSWSSMMSAYAKGRRSKDALELWREMR 230

Query: 497 ---------------------------------------KRDLISWNTMIHGYATCGNVG 435
                                                  + D+     +I  YA CG++ 
Sbjct: 231 AACVNPDCITMVSVLSACGDMGALTVGAEVHQFVGSNGVELDVKLGTALIDMYAKCGDIE 290

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
            + ++F    V+D+++WSSMI G A     ++AL LF  M    ++P+++T + +L +C 
Sbjct: 291 NSVRVFHSMPVKDVLTWSSMIIGLANHGLGHDALSLFSRMLSEGLQPNEITFIGVLISCT 350

Query: 254 DIGALGMG-KIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIF-DVMGVKDVLTW 81
            +G +  G K        + +   V+    +VD+  + G IE + ++  D+    D + W
Sbjct: 351 HLGLVSDGKKYFRSMSVVHGVTPKVEHYGCMVDLLGRSGHIEEARQLIRDMPFEPDAVIW 410

Query: 80  SAMI 69
            A++
Sbjct: 411 RALL 414


>ref|XP_012699236.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Setaria italica]
           gi|944262600|gb|KQL26857.1| hypothetical protein
           SETIT_032642mg [Setaria italica]
          Length = 614

 Score =  283 bits (724), Expect = 1e-73
 Identities = 151/269 (56%), Positives = 186/269 (69%), Gaps = 9/269 (3%)
 Frame = -1

Query: 782 DSFSLSLVLQACGRSVNE*--------NGRRVHTHVVKLGFGL-DLFVQTALVEMYAKLG 630
           +SFSLSL LQA                    +H   +K GF   DLFV+TALVE YAK G
Sbjct: 69  NSFSLSLALQATAAVSGSVPATLRISLRAASLHACALKSGFAAADLFVRTALVEAYAKSG 128

Query: 629 TAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWNTMIHGYAT 450
            A++AR    E  + DVF  NV+LA YV  GE+  AR++FD M  RD++SWNTMIHGYA 
Sbjct: 129 RADLARAAFDESPRRDVFLCNVMLAAYVARGEVVEARKVFDGMRDRDMVSWNTMIHGYAV 188

Query: 449 CGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSI 270
            G+V  AR +FD    RD  SWSSM++ Y K R+S EAL L+  M  A V PD +T+VS+
Sbjct: 189 KGDVSMARVIFDGMDDRDAFSWSSMMSAYTKGRRSKEALELWREMCAARVTPDCITMVSV 248

Query: 269 LSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKDV 90
           LSACGD+GAL +G  +H+++ERN I+VDVKLGT+L+DMYAKCGDIENSL++F  M  KDV
Sbjct: 249 LSACGDMGALAVGVEVHQFVERNGIEVDVKLGTALIDMYAKCGDIENSLRVFHSMPAKDV 308

Query: 89  LTWSAMIIGLANHGLGELALDHFSRMISE 3
           LTWS+MIIGLANHGLG  AL  FSRM+SE
Sbjct: 309 LTWSSMIIGLANHGLGHDALGLFSRMVSE 337



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           D+     ++  YA  G   +AR I   MD  D FS++ +++ Y +      A +L+ +M 
Sbjct: 175 DMVSWNTMIHGYAVKGDVSMARVIFDGMDDRDAFSWSSMMSAYTKGRRSKEALELWREMC 234

Query: 497 KR---------------------------------------DLISWNTMIHGYATCGNVG 435
                                                    D+     +I  YA CG++ 
Sbjct: 235 AARVTPDCITMVSVLSACGDMGALAVGVEVHQFVERNGIEVDVKLGTALIDMYAKCGDIE 294

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
            + ++F     +D+++WSSMI G A     ++AL LF  M    + P+++T + +L AC 
Sbjct: 295 NSLRVFHSMPAKDVLTWSSMIIGLANHGLGHDALGLFSRMVSEGLPPNEITFIGVLIACT 354

Query: 254 DIGALGMGKIIHEYIER-NQIQVDVKLGTSLVDMYAKCGDIENSLKIF-DVMGVKDVLTW 81
            +G +  GK     +   + +   V+    +VD+  + G IE + ++  D+    D + W
Sbjct: 355 HLGLVSDGKKYFSSMSAVHGVAPKVEHYGCMVDLLGRSGHIEEARQLIRDMPFEPDAVIW 414

Query: 80  SAMI 69
            A++
Sbjct: 415 RALL 418


>ref|XP_006658876.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Oryza brachyantha]
          Length = 509

 Score =  277 bits (709), Expect = 6e-72
 Identities = 137/225 (60%), Positives = 172/225 (76%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           DLFV+TALVEMYAK+G  ++AR    E  Q DVF  NV+LA YV   E+  AR++FD MP
Sbjct: 8   DLFVRTALVEMYAKVGRVDLARAAFDEAPQRDVFLCNVMLAAYVARSEVAEARKVFDGMP 67

Query: 497 KRDLISWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHN 318
            RDL+SWNTMIHGYA  G VG AR++FD +  RD  SWSSMI+ YAKSR+S EAL L+  
Sbjct: 68  ARDLVSWNTMIHGYAMRGEVGMAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALDLWRE 127

Query: 317 MQLANVRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGD 138
           M+ A + PD +TLVS++SAC D+GAL  G  +H ++E ++I++D+KLGT+L+DMYAKCGD
Sbjct: 128 MRAAGIMPDCITLVSVVSACSDLGALVTGAEVHNFVESSRIELDLKLGTALIDMYAKCGD 187

Query: 137 IENSLKIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           IE+S K+FD M VKDV TWS MIIGLANHGLG  +L  FS+MISE
Sbjct: 188 IESSQKVFDRMPVKDVQTWSTMIIGLANHGLGHESLSLFSKMISE 232



 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 41/263 (15%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           DL     ++  YA  G   +AR+I    +  D FS++ +++ Y ++     A  L+ +M 
Sbjct: 70  DLVSWNTMIHGYAMRGEVGMAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALDLWREMR 129

Query: 497 ---------------------------------------KRDLISWNTMIHGYATCGNVG 435
                                                  + DL     +I  YA CG++ 
Sbjct: 130 AAGIMPDCITLVSVVSACSDLGALVTGAEVHNFVESSRIELDLKLGTALIDMYAKCGDIE 189

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
           +++++FD   V+D+ +WS+MI G A     +E+L LF  M    ++P+ VT V +L AC 
Sbjct: 190 SSQKVFDRMPVKDVQTWSTMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACT 249

Query: 254 DIGALGMGKIIHEYIER-NQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVK-DVLTW 81
            +G +  GK     + + + ++  V+    +VD+  + G +E +  +   M  + D + W
Sbjct: 250 HVGLVTEGKKYFRSMNQVHGVEPTVEHYGCMVDLLGRSGHVEEARHLIRSMPFEPDAIIW 309

Query: 80  SAMIIGLANHGLGELALDHFSRM 12
            A++     H   ++A +   R+
Sbjct: 310 RALLGACRIHKNVDIAEEAMVRL 332


>ref|XP_008670604.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Zea mays]
          Length = 610

 Score =  276 bits (706), Expect = 1e-71
 Identities = 148/289 (51%), Positives = 195/289 (67%), Gaps = 10/289 (3%)
 Frame = -1

Query: 839 PQESMSLFFQMRLQEGTILD-SFSLSLVLQACGRSVNE*NGRR--------VHTHVVKLG 687
           P +++ L   +  +   +LD SFSLSL +QA           R        +H   +K G
Sbjct: 45  PLQALLLLRSVLPRAPRLLDNSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSG 104

Query: 686 FGL-DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLF 510
           F   DLFV+TALVE YAK G A++AR    E  + DVF  NV+LA YV  GE+  AR++F
Sbjct: 105 FAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVF 164

Query: 509 DKMPKRDLISWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALR 330
           D M +RD++SWNTMIHGYA  G V  AR++F+    RD  SWSSM++ Y K R+S +AL 
Sbjct: 165 DGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALE 224

Query: 329 LFHNMQLANVRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYA 150
           L+  M+ A V PD  T+VS+LSAC D+GAL +G  +H+++E N +++DVKLGT+L+DMYA
Sbjct: 225 LWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYA 284

Query: 149 KCGDIENSLKIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           KCGDIENS+++F  M VKDVLTWS+MIIGLANHG G  AL  FSRM+SE
Sbjct: 285 KCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSE 333



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 41/244 (16%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           D+     ++  YA  G  ++AR++ + MD  D FS++ +++ Y +      A +L+ +M 
Sbjct: 171 DMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMR 230

Query: 497 ---------------------------------------KRDLISWNTMIHGYATCGNVG 435
                                                  + D+     +I  YA CG++ 
Sbjct: 231 AACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIE 290

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
            + ++F    V+D+++WSSMI G A     ++AL LF  M    ++P++VT + +L +C 
Sbjct: 291 NSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCT 350

Query: 254 DIGALGMGKIIHEYIE-RNQIQVDVKLGTSLVDMYAKCGDIENSLKIF-DVMGVKDVLTW 81
            +G +  GK     +   + +   V+    +VD+  + G IE + ++  D+    D + W
Sbjct: 351 HLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIW 410

Query: 80  SAMI 69
            A++
Sbjct: 411 RALL 414


>tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
          Length = 575

 Score =  276 bits (706), Expect = 1e-71
 Identities = 148/289 (51%), Positives = 195/289 (67%), Gaps = 10/289 (3%)
 Frame = -1

Query: 839 PQESMSLFFQMRLQEGTILD-SFSLSLVLQACGRSVNE*NGRR--------VHTHVVKLG 687
           P +++ L   +  +   +LD SFSLSL +QA           R        +H   +K G
Sbjct: 10  PLQALLLLRSVLPRAPRLLDNSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSG 69

Query: 686 FGL-DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLF 510
           F   DLFV+TALVE YAK G A++AR    E  + DVF  NV+LA YV  GE+  AR++F
Sbjct: 70  FAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVF 129

Query: 509 DKMPKRDLISWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALR 330
           D M +RD++SWNTMIHGYA  G V  AR++F+    RD  SWSSM++ Y K R+S +AL 
Sbjct: 130 DGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALE 189

Query: 329 LFHNMQLANVRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYA 150
           L+  M+ A V PD  T+VS+LSAC D+GAL +G  +H+++E N +++DVKLGT+L+DMYA
Sbjct: 190 LWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYA 249

Query: 149 KCGDIENSLKIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           KCGDIENS+++F  M VKDVLTWS+MIIGLANHG G  AL  FSRM+SE
Sbjct: 250 KCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSE 298



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 54/244 (22%), Positives = 108/244 (44%), Gaps = 41/244 (16%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           D+     ++  YA  G  ++AR++ + MD  D FS++ +++ Y +      A +L+ +M 
Sbjct: 136 DMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMR 195

Query: 497 ---------------------------------------KRDLISWNTMIHGYATCGNVG 435
                                                  + D+     +I  YA CG++ 
Sbjct: 196 AACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIE 255

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
            + ++F    V+D+++WSSMI G A     ++AL LF  M    ++P++VT + +L +C 
Sbjct: 256 NSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCT 315

Query: 254 DIGALGMGKIIHEYIE-RNQIQVDVKLGTSLVDMYAKCGDIENSLKIF-DVMGVKDVLTW 81
            +G +  GK     +   + +   V+    +VD+  + G IE + ++  D+    D + W
Sbjct: 316 HLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIW 375

Query: 80  SAMI 69
            A++
Sbjct: 376 RALL 379


>gb|EMS46161.1| hypothetical protein TRIUR3_10442 [Triticum urartu]
          Length = 492

 Score =  265 bits (676), Expect = 4e-68
 Identities = 132/215 (61%), Positives = 164/215 (76%)
 Frame = -1

Query: 647 MYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWNTM 468
           MYAK G AE+AR    E  + DVF  NV+LA YV  GE+  AR++FD M  RDL+SWNTM
Sbjct: 1   MYAKSGRAELARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARRVFDGMRDRDLVSWNTM 60

Query: 467 IHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDK 288
           IHGYA  G+VG AR++FD +S RD  SWSSMI+ YAK R+S EAL L+  M+ A V PD 
Sbjct: 61  IHGYAVRGDVGMAREIFDATSDRDAFSWSSMISAYAKGRRSKEALELWKVMRAARVAPDC 120

Query: 287 VTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDV 108
           +T+VS+LSAC D+GAL +G  +H ++E ++++VD+KLGT+LVDMYAKCGDIENSLK+F  
Sbjct: 121 ITMVSVLSACSDMGALTIGAEVHRFVESHRVEVDMKLGTALVDMYAKCGDIENSLKVFRA 180

Query: 107 MGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           M V DVLTWS+MIIGLANHGLG  AL  FS MIS+
Sbjct: 181 MPVMDVLTWSSMIIGLANHGLGHDALSLFSEMISQ 215



 Score = 71.2 bits (173), Expect = 9e-10
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 41/263 (15%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           DL     ++  YA  G   +AR+I       D FS++ +++ Y +      A +L+  M 
Sbjct: 53  DLVSWNTMIHGYAVRGDVGMAREIFDATSDRDAFSWSSMISAYAKGRRSKEALELWKVMR 112

Query: 497 KR---------------------------------------DLISWNTMIHGYATCGNVG 435
                                                    D+     ++  YA CG++ 
Sbjct: 113 AARVAPDCITMVSVLSACSDMGALTIGAEVHRFVESHRVEVDMKLGTALVDMYAKCGDIE 172

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
            + ++F    V D+++WSSMI G A     ++AL LF  M    ++P+++T V +L AC 
Sbjct: 173 NSLKVFRAMPVMDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFVGVLIACT 232

Query: 254 DIGALGMG-KIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVK-DVLTW 81
            +G +  G K      + + +   V+    +VD+  + G +E ++++   M  + D + W
Sbjct: 233 HVGLVSDGKKYFSSMTDVHGVVPRVEHYGCMVDLLGRAGHVEEAMQLIRSMPFEPDAIIW 292

Query: 80  SAMIIGLANHGLGELALDHFSRM 12
             ++     H   E+A +  +++
Sbjct: 293 RTLLGACRIHKNVEIAEEAMAKL 315


>gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  257 bits (656), Expect = 8e-66
 Identities = 125/215 (58%), Positives = 161/215 (74%)
 Frame = -1

Query: 647 MYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWNTM 468
           MYAK G  ++AR    E    DVF  NV+LA YV   E+  AR++FD MP RDL+SWNTM
Sbjct: 1   MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTM 60

Query: 467 IHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDK 288
           IHGYA  G VG AR++FD +  RD  SWSSMI+ YAKSR+S EAL L+  M  A++ PD 
Sbjct: 61  IHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDC 120

Query: 287 VTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDV 108
           +TLVS++SAC D+GAL +G  +H ++E N+I++D+KLGT+L+DMYAKCGDIE++ ++FD 
Sbjct: 121 ITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDR 180

Query: 107 MGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           M  KDV TWS+MIIGLANHGLG  +L  FS+MISE
Sbjct: 181 MPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISE 215



 Score = 81.6 bits (200), Expect = 6e-13
 Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 41/263 (15%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           DL     ++  YA  G   +AR+I    +  D FS++ +++ Y ++     A +L+ +M 
Sbjct: 53  DLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMH 112

Query: 497 ---------------------------------------KRDLISWNTMIHGYATCGNVG 435
                                                  + DL     +I  YA CG++ 
Sbjct: 113 AASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIE 172

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
           +A+++FD    +D+ +WSSMI G A     +E+L LF  M    ++P+ VT V +L AC 
Sbjct: 173 SAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACT 232

Query: 254 DIGALGMG-KIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVK-DVLTW 81
            +G +  G K      E + I+  V+    +VD+  + G +E + ++   M  + D + W
Sbjct: 233 HVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIW 292

Query: 80  SAMIIGLANHGLGELALDHFSRM 12
            A++     H   E+A +  +++
Sbjct: 293 RALLGACRIHKNVEIAEEAMAKL 315


>ref|XP_010234994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Brachypodium distachyon]
          Length = 494

 Score =  256 bits (654), Expect = 1e-65
 Identities = 129/217 (59%), Positives = 161/217 (74%), Gaps = 2/217 (0%)
 Frame = -1

Query: 647 MYAKLGTAEVA--RKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWN 474
           MYAK    E+A  R    E  + DVF  NV+LA YV  GE+  AR++FD M  RDL+SWN
Sbjct: 1   MYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRDLVSWN 60

Query: 473 TMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRP 294
           TMIHGYA  G+VG AR++FD +  RD  SWSSMI+ YAK R S EAL L+  M++A V P
Sbjct: 61  TMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAP 120

Query: 293 DKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIF 114
           D +++VS+LSAC  +GAL +G  +H ++E N+++VD+KLGT+LVDMYAKCGDIENSLK+F
Sbjct: 121 DCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVF 180

Query: 113 DVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
             M VKDVLTWS+MIIGLANHGLG  AL  FS MIS+
Sbjct: 181 HAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQ 217



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 52/232 (22%), Positives = 111/232 (47%), Gaps = 10/232 (4%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMD----QPDVFSYNVLLAEYVRNGEIDLARQLF 510
           D F  ++++  YAK   ++ A ++  EM      PD  S   +L+     G + +  ++ 
Sbjct: 86  DAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVH 145

Query: 509 DKMPKR----DLISWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSN 342
             +       D+     ++  YA CG++  + ++F    V+D+++WSSMI G A     +
Sbjct: 146 RFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGH 205

Query: 341 EALRLFHNMQLANVRPDKVTLVSILSACGDIGALGMG-KIIHEYIERNQIQVDVKLGTSL 165
           +AL LF  M    ++P+++T + +L AC  +G +  G K      + + +   ++    +
Sbjct: 206 DALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCM 265

Query: 164 VDMYAKCGDIENSLKIFDVMGVK-DVLTWSAMIIGLANHGLGELALDHFSRM 12
           VD+  + G +E ++++   M  K D + W  ++     H   E+A +  +++
Sbjct: 266 VDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKL 317


>ref|XP_008807797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Phoenix dactylifera]
          Length = 444

 Score =  247 bits (630), Expect = 9e-63
 Identities = 118/167 (70%), Positives = 144/167 (86%)
 Frame = -1

Query: 503 MPKRDLISWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLF 324
           MP RDL+SWNTMIHGYA  G++ AA+++FD +  RDL SWSSMI+ YA+SRQS+ ALRLF
Sbjct: 1   MPDRDLVSWNTMIHGYAMSGDLRAAQEIFDRTHERDLFSWSSMISAYAQSRQSSGALRLF 60

Query: 323 HNMQLANVRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKC 144
           H MQLANV PDKVT+VS+LSAC D+GAL MGK+IH++IER  I+VDV+LGTSLVDMYAKC
Sbjct: 61  HEMQLANVAPDKVTMVSVLSACSDLGALSMGKVIHKFIERKGIEVDVRLGTSLVDMYAKC 120

Query: 143 GDIENSLKIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           GDI++SL +F  +  +DVLTWS+MIIGLANHGLG +ALD FS+MISE
Sbjct: 121 GDIDSSLGLFHKLSERDVLTWSSMIIGLANHGLGMVALDFFSKMISE 167



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 41/244 (16%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           DL     ++  YA  G    A++I     + D+FS++ +++ Y ++ +   A +LF +M 
Sbjct: 5   DLVSWNTMIHGYAMSGDLRAAQEIFDRTHERDLFSWSSMISAYAQSRQSSGALRLFHEMQ 64

Query: 497 KRDL-------------------ISWNTMIHG--------------------YATCGNVG 435
             ++                   +S   +IH                     YA CG++ 
Sbjct: 65  LANVAPDKVTMVSVLSACSDLGALSMGKVIHKFIERKGIEVDVRLGTSLVDMYAKCGDID 124

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
           ++  LF   S RD+++WSSMI G A       AL  F  M    V+P+++T V +L+AC 
Sbjct: 125 SSLGLFHKLSERDVLTWSSMIIGLANHGLGMVALDFFSKMISEGVKPNEITFVGVLTACS 184

Query: 254 DIGALGMGKI-IHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLK-IFDVMGVKDVLTW 81
             G +  G+   +   +   I   ++    +VD+  + G IE + + I D+    D + W
Sbjct: 185 HAGLVSEGRAHFNSMSDVYGISPTIEHYGCMVDLLGRAGLIEEARQFIKDMPFEPDAVVW 244

Query: 80  SAMI 69
            A++
Sbjct: 245 RALL 248


>ref|XP_010052946.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Eucalyptus grandis]
          Length = 444

 Score =  246 bits (629), Expect = 1e-62
 Identities = 117/167 (70%), Positives = 145/167 (86%)
 Frame = -1

Query: 503 MPKRDLISWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLF 324
           M +RDL+SWNTMIHGYAT G+V  AR+LFD +  RD+VSWSSMI  YA++RQSNEAL+LF
Sbjct: 1   MLERDLVSWNTMIHGYATLGDVMEARKLFDDARERDVVSWSSMIGAYARTRQSNEALKLF 60

Query: 323 HNMQLANVRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKC 144
           H MQLANV PD +T+VS+L+ACGDIGALGMGK+IHEYI+R +I+VD+KLGTSLVDMYAKC
Sbjct: 61  HEMQLANVVPDNITMVSVLAACGDIGALGMGKMIHEYIKRTRIEVDMKLGTSLVDMYAKC 120

Query: 143 GDIENSLKIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           GDI++SL++F+ M  +DVLTWS+ I+GLANHG G+ AL  FS MI+E
Sbjct: 121 GDIDSSLRVFNQMDRRDVLTWSSAILGLANHGSGQAALQFFSEMIAE 167



 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           DL     ++  YA LG    ARK+  +  + DV S++ ++  Y R  + + A +LF +M 
Sbjct: 5   DLVSWNTMIHGYATLGDVMEARKLFDDARERDVVSWSSMIGAYARTRQSNEALKLFHEMQ 64

Query: 497 KRDLISWNT-------------------MIHGY--------------------ATCGNVG 435
             +++  N                    MIH Y                    A CG++ 
Sbjct: 65  LANVVPDNITMVSVLAACGDIGALGMGKMIHEYIKRTRIEVDMKLGTSLVDMYAKCGDID 124

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
           ++ ++F+    RD+++WSS I G A       AL+ F  M    + PD +  V +LSAC 
Sbjct: 125 SSLRVFNQMDRRDVLTWSSAILGLANHGSGQAALQFFSEMIAEGIEPDDMAFVGVLSACS 184

Query: 254 DIGALGMGKIIHEYI-ERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMG-VKDVLTW 81
            +G +  G+     + +   I   ++    +VD+ A+ G ++ + ++   M    D + W
Sbjct: 185 HMGLVDEGRTYFTLMSDVYGIAPKMEHYGCMVDILARAGRLQEARELIRKMPFAPDAVVW 244

Query: 80  SAMIIGLANHGLGELA 33
            A++ G   +   +LA
Sbjct: 245 RALLGGCRVYKESDLA 260



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
 Frame = -1

Query: 833 ESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQTAL 654
           E++ LF +M+L    + D+ ++  VL ACG       G+ +H ++ +    +D+ + T+L
Sbjct: 55  EALKLFHEMQLAN-VVPDNITMVSVLAACGDIGALGMGKMIHEYIKRTRIEVDMKLGTSL 113

Query: 653 VEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKM----PKRDL 486
           V+MYAK G  + + ++ ++MD+ DV +++  +     +G    A Q F +M     + D 
Sbjct: 114 VDMYAKCGDIDSSLRVFNQMDRRDVLTWSSAILGLANHGSGQAALQFFSEMIAEGIEPDD 173

Query: 485 ISWNTMIHGYATCGNVGAARQLFDMSS-----VRDLVSWSSMIAGYAKSRQSNEALRLFH 321
           +++  ++   +  G V   R  F + S        +  +  M+   A++ +  EA  L  
Sbjct: 174 MAFVGVLSACSHMGLVDEGRTYFTLMSDVYGIAPKMEHYGCMVDILARAGRLQEARELIR 233

Query: 320 NMQLANVRPDKVTLVSILSAC 258
            M  A   PD V   ++L  C
Sbjct: 234 KMPFA---PDAVVWRALLGGC 251


>gb|AGT16322.1| pentatricopeptide repeat-containing protein [Saccharum hybrid
           cultivar R570]
          Length = 565

 Score =  246 bits (627), Expect = 2e-62
 Identities = 118/194 (60%), Positives = 152/194 (78%)
 Frame = -1

Query: 584 DVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLISWNTMIHGYATCGNVGAARQLFDMSS 405
           DVF  NV+LA YV  GE+  AR++FD M +RD++SWNTMIHGYA  G V  AR++FD   
Sbjct: 95  DVFLCNVMLAVYVARGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVALAREMFDGMQ 154

Query: 404 VRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACGDIGALGMGKI 225
           VRD  SWSSM++ YAK R+S +AL L+  M+ A V PD +T+VS+LSACGD+GAL +G  
Sbjct: 155 VRDAFSWSSMMSAYAKGRRSKDALELWREMRAACVNPDCITMVSVLSACGDMGALTVGAE 214

Query: 224 IHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKDVLTWSAMIIGLANHGL 45
           +H+++  N +++DVKLGT+L+DMYAKCGDIENS+++F  M VKDVLTWS+MIIGLANHGL
Sbjct: 215 VHQFVGSNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGL 274

Query: 44  GELALDHFSRMISE 3
           G  AL  FSRM+SE
Sbjct: 275 GHDALSLFSRMLSE 288



 Score = 68.2 bits (165), Expect = 7e-09
 Identities = 52/244 (21%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
 Frame = -1

Query: 677 DLFVQTALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMP 498
           D+     ++  YA  G   +AR++   M   D FS++ +++ Y +      A +L+ +M 
Sbjct: 126 DMVSWNTMIHGYAVNGEVALAREMFDGMQVRDAFSWSSMMSAYAKGRRSKDALELWREMR 185

Query: 497 ---------------------------------------KRDLISWNTMIHGYATCGNVG 435
                                                  + D+     +I  YA CG++ 
Sbjct: 186 AACVNPDCITMVSVLSACGDMGALTVGAEVHQFVGSNGVELDVKLGTALIDMYAKCGDIE 245

Query: 434 AARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACG 255
            + ++F    V+D+++WSSMI G A     ++AL LF  M    ++P+++T + +L +C 
Sbjct: 246 NSVRVFHSMPVKDVLTWSSMIIGLANHGLGHDALSLFSRMLSEGLQPNEITFIGVLISCT 305

Query: 254 DIGALGMG-KIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIF-DVMGVKDVLTW 81
            +G +  G K        + +   V+    +VD+  + G IE + ++  D+    D + W
Sbjct: 306 HLGLVSDGKKYFRSMSVVHGVTPKVEHYGCMVDLLGRSGHIEEARQLIRDMPFEPDAVIW 365

Query: 80  SAMI 69
            A++
Sbjct: 366 RALL 369


>emb|CDO96870.1| unnamed protein product [Coffea canephora]
          Length = 516

 Score =  244 bits (624), Expect = 4e-62
 Identities = 125/278 (44%), Positives = 180/278 (64%), Gaps = 1/278 (0%)
 Frame = -1

Query: 839 PQESMSLFFQMRLQEGTIL-DSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQ 663
           P  ++ LF ++   +  +L D ++ + VL+AC       +G+++H  V+K G   D+++ 
Sbjct: 73  PNVALFLFLKLLCDDQDLLPDKYTYTFVLKACASLCRVKHGKQIHGCVIKNGLSWDVYIC 132

Query: 662 TALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLI 483
             L+ MYAK G  E AR +L  M   DV S+N +L+ YV  G +DLA   F +MP ++L 
Sbjct: 133 NTLLHMYAKCGCFEAARHMLDRMPNRDVVSWNAVLSVYVEMGLVDLAFDFFSEMPVKNLE 192

Query: 482 SWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLAN 303
           SWN M+ GYA  G +  AR++FD  SV+D+VSW+++I GYA S + NE L LF +MQ A 
Sbjct: 193 SWNFMLSGYANSGLLDEARRVFDEMSVKDVVSWNALITGYANSGRYNEVLELFDDMQRAR 252

Query: 302 VRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSL 123
           V+PD  TLV++LSAC  IGAL  GK +H Y++RN I+ +  L T+LVDMY+KCG IE ++
Sbjct: 253 VKPDNHTLVTLLSACAGIGALEQGKWVHAYMDRNGIEANGFLATALVDMYSKCGCIEKAV 312

Query: 122 KIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMI 9
           ++FD    KDV TW+AMI G + HG GE AL  FS M+
Sbjct: 313 EVFDSASRKDVSTWNAMITGFSVHGFGEQALKVFSEMV 350


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
           [Vitis vinifera]
          Length = 536

 Score =  244 bits (623), Expect = 6e-62
 Identities = 121/279 (43%), Positives = 184/279 (65%)
 Frame = -1

Query: 839 PQESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQT 660
           P+ ++++F QM L    + D ++ +  L++CG       GR++H HV+K G G DLF+Q 
Sbjct: 89  PEAALTIFHQM-LHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQN 147

Query: 659 ALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLIS 480
            L+ +YA  G  E AR +L  M + DV S+N LL+ Y   G ++LA  LFD+M +R++ S
Sbjct: 148 TLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVES 207

Query: 479 WNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANV 300
           WN MI GY   G +  AR++F  + V+++VSW++MI GY+ + + +E L LF +MQ A V
Sbjct: 208 WNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGV 267

Query: 299 RPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLK 120
           +PD  TLVS+LSAC  +GAL  G+ +H YI++N I +D  + T+LVDMY+KCG IE +L+
Sbjct: 268 KPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALE 327

Query: 119 IFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
           +F+    KD+ TW+++I GL+ HG G+ AL  FS M+ E
Sbjct: 328 VFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVE 366



 Score = 87.8 bits (216), Expect = 9e-15
 Identities = 44/125 (35%), Positives = 70/125 (56%)
 Frame = -1

Query: 386 WSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACGDIGALGMGKIIHEYIE 207
           W+++I  YA S     AL +FH M  A+V PDK T    L +CG    +  G+ IH ++ 
Sbjct: 76  WNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVL 135

Query: 206 RNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKDVLTWSAMIIGLANHGLGELALD 27
           +  +  D+ +  +L+ +YA CG IE++  + D M  +DV++W+A++   A  GL ELA  
Sbjct: 136 KTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACH 195

Query: 26  HFSRM 12
            F  M
Sbjct: 196 LFDEM 200



 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 56/249 (22%), Positives = 108/249 (43%), Gaps = 41/249 (16%)
 Frame = -1

Query: 656 LVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDL--- 486
           ++  Y  +G  E AR++  E    +V S+N ++  Y   G       LF+ M    +   
Sbjct: 211 MISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPD 270

Query: 485 ----------------ISWNTMIHGY--------------------ATCGNVGAARQLFD 414
                           +S    +H Y                    + CG++  A ++F+
Sbjct: 271 NCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFN 330

Query: 413 MSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACGDIGALGM 234
               +D+ +W+S+I+G +       AL++F  M +   +P++VT V +LSAC   G L  
Sbjct: 331 SCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDE 390

Query: 233 GK-IIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKDV-LTWSAMIIGL 60
           G+ + +  +  + IQ  ++    +VD+  + G +E + ++   M  K+  + W +++   
Sbjct: 391 GREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGAC 450

Query: 59  ANHGLGELA 33
            NHG  ELA
Sbjct: 451 RNHGNVELA 459


>ref|XP_007025291.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590623325|ref|XP_007025292.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein, putative isoform
           1 [Theobroma cacao] gi|590623329|ref|XP_007025293.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|590623333|ref|XP_007025294.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein, putative isoform
           1 [Theobroma cacao] gi|590623336|ref|XP_007025295.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780657|gb|EOY27913.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508780658|gb|EOY27914.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780659|gb|EOY27915.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508780660|gb|EOY27916.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508780661|gb|EOY27917.1| Pentatricopeptide repeat
           (PPR-like) superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 535

 Score =  239 bits (609), Expect = 2e-60
 Identities = 123/277 (44%), Positives = 179/277 (64%)
 Frame = -1

Query: 839 PQESMSLFFQMRLQEGTILDSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQT 660
           PQ ++SLF QM LQ     D +S + VL+AC        GR++H  V+++G G D+FV  
Sbjct: 90  PQNALSLFRQM-LQGPVFPDKYSFTFVLKACAGFGGVQEGRQIHGLVLRMGIGFDVFVAN 148

Query: 659 ALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLIS 480
            L+ +Y K G   VAR +L  M + D  S+N LL+ Y+  G I LA  LF++M +R++ S
Sbjct: 149 TLIHVYGKGGYFGVARSLLDRMPKRDAVSWNALLSAYIETGYIRLASGLFEEMEERNVES 208

Query: 479 WNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANV 300
           WN MI GY + G V  AR +F    V+++VSW+++I GYA +    E L LF +MQ   V
Sbjct: 209 WNFMISGYLSAGLVEEARSVFYRMPVKNVVSWNALITGYAHTSCFGEVLVLFEDMQREKV 268

Query: 299 RPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLK 120
           +PD  TLV++LSAC  +GALG G+ IH YI++N I ++  + T+LVDMY+KCG+I+ +L 
Sbjct: 269 KPDNCTLVNVLSACAHLGALGQGEWIHSYIDKNAIGINGYIATALVDMYSKCGNIDKALY 328

Query: 119 IFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMI 9
           +F     KD+ TW+++I+GL  HGLGE AL+ FS M+
Sbjct: 329 VFRNASRKDISTWNSIIVGLGMHGLGEHALEIFSEML 365



 Score = 69.7 bits (169), Expect = 3e-09
 Identities = 42/140 (30%), Positives = 66/140 (47%)
 Frame = -1

Query: 431 ARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLANVRPDKVTLVSILSACGD 252
           A  +F  ++  +  S++S+I  YA S     AL LF  M    V PDK +   +L AC  
Sbjct: 62  AHSVFTHTTNPNSYSYNSLIRAYANSHTPQNALSLFRQMLQGPVFPDKYSFTFVLKACAG 121

Query: 251 IGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSLKIFDVMGVKDVLTWSAM 72
            G +  G+ IH  + R  I  DV +  +L+ +Y K G    +  + D M  +D ++W+A+
Sbjct: 122 FGGVQEGRQIHGLVLRMGIGFDVFVANTLIHVYGKGGYFGVARSLLDRMPKRDAVSWNAL 181

Query: 71  IIGLANHGLGELALDHFSRM 12
           +      G   LA   F  M
Sbjct: 182 LSAYIETGYIRLASGLFEEM 201


>ref|XP_012484752.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18840
           [Gossypium raimondii] gi|763767696|gb|KJB34911.1|
           hypothetical protein B456_006G090000 [Gossypium
           raimondii]
          Length = 534

 Score =  238 bits (608), Expect = 3e-60
 Identities = 121/280 (43%), Positives = 180/280 (64%), Gaps = 1/280 (0%)
 Frame = -1

Query: 839 PQESMSLFFQMRLQEGTIL-DSFSLSLVLQACGRSVNE*NGRRVHTHVVKLGFGLDLFVQ 663
           P+ ++ LF QM L+ G +L D +S +  L+AC        G ++H   +KLG G D+FV 
Sbjct: 90  PENALFLFRQM-LKGGPVLPDKYSFTFALKACAGFCGVEEGMQIHGLALKLGIGFDIFVA 148

Query: 662 TALVEMYAKLGTAEVARKILSEMDQPDVFSYNVLLAEYVRNGEIDLARQLFDKMPKRDLI 483
             L+ +Y K G    AR +L  M   DV S+N LL+ Y+  G I LAR LFD+M +R++ 
Sbjct: 149 NTLIHVYGKSGHFGFARSLLDRMADRDVVSWNALLSAYIETGFIRLARGLFDEMDERNVE 208

Query: 482 SWNTMIHGYATCGNVGAARQLFDMSSVRDLVSWSSMIAGYAKSRQSNEALRLFHNMQLAN 303
           SWN MI GY + G +  A+ +FD   ++D+VSW+++I GYA + + +E L LF +MQ   
Sbjct: 209 SWNFMISGYLSSGLLEEAKSVFDSMPLKDVVSWNAIITGYAHASRFDEVLELFEDMQREE 268

Query: 302 VRPDKVTLVSILSACGDIGALGMGKIIHEYIERNQIQVDVKLGTSLVDMYAKCGDIENSL 123
           VRPD  TLV++LSAC  +GALG G+ IH YI++N I  +  + T+LVDM++KCG+I+ ++
Sbjct: 269 VRPDTCTLVNVLSACAHLGALGQGEWIHGYIDKNGIDTNGFIATALVDMHSKCGNIDKAV 328

Query: 122 KIFDVMGVKDVLTWSAMIIGLANHGLGELALDHFSRMISE 3
            +F     KD+ TW+++I+GL  HG GE AL+ FS M+ E
Sbjct: 329 NVFRNASKKDISTWNSIIVGLGMHGYGETALETFSEMLME 368