BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00039730
         (535 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGN73970.1| RNA polymerase beta subunit-2 (chloroplast) [Acon...   173   5e-41
ref|YP_002836080.1| RNA polymerase beta'' subunit [Megaleranthis...   167   2e-39
ref|YP_009169346.1| RNA polymerase beta'' subunit (chloroplast) ...   164   2e-38
gb|AIZ57523.1| RNA poymerase beta subunit-2 (chloroplast) [Clema...   164   3e-38
gb|AKM98512.1| RNA polymerase beta subunit-2 (chloroplast) [Puls...   160   5e-37
gb|AKM98248.1| RNA polymerase beta subunit-2 (chloroplast) [Puls...   160   5e-37
gb|AKM98072.1| RNA polymerase beta subunit-2 (chloroplast) [Anem...   160   5e-37
gb|AKZ23940.1| RNA polymerase beta'' subunit (plastid) [Convolvu...   159   6e-37
ref|YP_009093940.1| RNA polymerase beta' subunit (chloroplast) [...   159   1e-36
ref|YP_740640.1| RNA polymerase beta'' subunit [Nandina domestic...   159   1e-36
ref|YP_784376.1| RNA polymerase beta' subunit [Drimys granadensi...   137   1e-36
ref|YP_009114859.1| RNA polymerase beta' subunit [Thalictrum cor...   158   2e-36
ref|YP_004563857.1| RNA polymerase beta' subunit [Nelumbo lutea]...   158   2e-36
sp|Q7YJY0.1|RPOC2_CALFG RecName: Full=DNA-directed RNA polymeras...   136   2e-36
ref|NP_862744.2| RNA polymerase beta'' subunit [Calycanthus flor...   136   2e-36
gb|AKZ23941.1| RNA polymerase beta'' subunit (plastid) [Ipomoea ...   156   5e-36
ref|YP_009026871.1| RNA polymerase beta'' subunit (plastid) [Mag...   156   5e-36
gb|AGW96497.1| RNA polymerase beta' subunit (chloroplast) [Ipomo...   156   5e-36
ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) ...   156   5e-36
ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) ...   156   5e-36

>gb|AGN73970.1| RNA polymerase beta subunit-2 (chloroplast) [Aconitum barbatum var.
            puberulum]
          Length = 1381

 Score =  173 bits (438), Expect = 5e-41
 Identities = 92/116 (79%), Positives = 99/116 (85%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIP+GTGFKGLVHRL
Sbjct: 1269 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPVGTGFKGLVHRL 1328

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRYNDTSEQSFTGFTDS 187
            S HSNISLEIEKKNLFEGG +      +K++     + F   +DTSEQSFTGFTDS
Sbjct: 1329 SQHSNISLEIEKKNLFEGGMRDILFHHKKLLDSCISKNF---HDTSEQSFTGFTDS 1381


>ref|YP_002836080.1| RNA polymerase beta'' subunit [Megaleranthis saniculifolia]
            gi|226933872|gb|ACO92005.1| RNA polymerase beta'' subunit
            (chloroplast) [Megaleranthis saniculifolia]
          Length = 1383

 Score =  167 bits (424), Expect = 2e-39
 Identities = 92/121 (76%), Positives = 98/121 (80%), Gaps = 5/121 (4%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVHRL
Sbjct: 1271 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRL 1330

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKF-----PRYNDTSEQSFTGFTD 190
            S HSNISLEIEKKNLFEGG           I F H + F       ++DT+EQSFTGFTD
Sbjct: 1331 SQHSNISLEIEKKNLFEGG--------MGDILFHHKELFDSCTQKNFHDTAEQSFTGFTD 1382

Query: 189  S 187
            S
Sbjct: 1383 S 1383


>ref|YP_009169346.1| RNA polymerase beta'' subunit (chloroplast) [Clematis terniflora]
            gi|687814845|gb|AIQ81087.1| RNA polymerase beta'' subunit
            (chloroplast) [Clematis terniflora]
          Length = 1383

 Score =  164 bits (415), Expect = 2e-38
 Identities = 90/120 (75%), Positives = 95/120 (79%), Gaps = 5/120 (4%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVH L
Sbjct: 1271 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHHL 1330

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFP-----RYNDTSEQSFTGFTD 190
            S H NISLEIEKKNLFEGG         + I F H + F       + DTSEQSFTGFTD
Sbjct: 1331 SPHRNISLEIEKKNLFEGG--------MRDILFHHKELFDSCIQNNFQDTSEQSFTGFTD 1382


>gb|AIZ57523.1| RNA poymerase beta subunit-2 (chloroplast) [Clematis fusca var.
            coreana]
          Length = 1380

 Score =  164 bits (414), Expect = 3e-38
 Identities = 87/115 (75%), Positives = 94/115 (81%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVH L
Sbjct: 1268 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHHL 1327

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRYNDTSEQSFTGFTD 190
            S H NISLEIEKKNLFEGG +   +  +++        F    DTSEQSFTGFTD
Sbjct: 1328 SPHRNISLEIEKKNLFEGGMRDILLHHKELFDSCIQNNF---QDTSEQSFTGFTD 1379


>gb|AKM98512.1| RNA polymerase beta subunit-2 (chloroplast) [Pulsatilla vernalis]
          Length = 1383

 Score =  160 bits (404), Expect = 5e-37
 Identities = 87/120 (72%), Positives = 94/120 (78%), Gaps = 5/120 (4%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLV  L
Sbjct: 1271 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVQHL 1330

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKF-----PRYNDTSEQSFTGFTD 190
            S H N+SLE+EKKNLFEGG         + I F H + F       + DTSEQSFTGFTD
Sbjct: 1331 SPHGNVSLEMEKKNLFEGG--------MRDILFHHKELFDSCIPKNFQDTSEQSFTGFTD 1382


>gb|AKM98248.1| RNA polymerase beta subunit-2 (chloroplast) [Pulsatilla pratensis]
            gi|844170447|gb|AKM98336.1| RNA polymerase beta subunit-2
            (chloroplast) [Pulsatilla pratensis]
          Length = 1385

 Score =  160 bits (404), Expect = 5e-37
 Identities = 87/120 (72%), Positives = 94/120 (78%), Gaps = 5/120 (4%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLV  L
Sbjct: 1273 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVQHL 1332

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKF-----PRYNDTSEQSFTGFTD 190
            S H N+SLE+EKKNLFEGG         + I F H + F       + DTSEQSFTGFTD
Sbjct: 1333 SPHGNVSLEMEKKNLFEGG--------MRDILFHHKELFDSCIPKNFQDTSEQSFTGFTD 1384


>gb|AKM98072.1| RNA polymerase beta subunit-2 (chloroplast) [Anemone patens]
            gi|844170199|gb|AKM98160.1| RNA polymerase beta subunit-2
            (chloroplast) [Anemone patens]
            gi|844170579|gb|AKM98424.1| RNA polymerase beta subunit-2
            (chloroplast) [Pulsatilla vernalis]
          Length = 1383

 Score =  160 bits (404), Expect = 5e-37
 Identities = 87/120 (72%), Positives = 94/120 (78%), Gaps = 5/120 (4%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLV  L
Sbjct: 1271 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVQHL 1330

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKF-----PRYNDTSEQSFTGFTD 190
            S H N+SLE+EKKNLFEGG         + I F H + F       + DTSEQSFTGFTD
Sbjct: 1331 SPHGNVSLEMEKKNLFEGG--------MRDILFHHKELFDSCIPKNFQDTSEQSFTGFTD 1382


>gb|AKZ23940.1| RNA polymerase beta'' subunit (plastid) [Convolvulus arvensis]
          Length = 1386

 Score =  159 bits (403), Expect = 6e-37
 Identities = 79/102 (77%), Positives = 88/102 (86%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            +ASLNTQSFISEASFQETARVLAKAAL+GRIDWLKGLKENVVLGGVIP GTGF+GLVH  
Sbjct: 1283 KASLNTQSFISEASFQETARVLAKAALQGRIDWLKGLKENVVLGGVIPAGTGFRGLVHPS 1342

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRY 229
              ++N+SLE  KKNLFEGG +RYFVPPQKII     +K P+Y
Sbjct: 1343 KQYNNLSLETTKKNLFEGGGERYFVPPQKIIRLFPFKKIPQY 1384


>ref|YP_009093940.1| RNA polymerase beta' subunit (chloroplast) [Nelumbo nucifera]
            gi|224474212|gb|ACN49398.1| RNA polymerase beta' subunit
            (chloroplast) [Nelumbo nucifera]
            gi|290489544|gb|ADD31156.1| RNA polymerase beta'' subunit
            protein (chloroplast) [Nelumbo nucifera]
            gi|383286787|gb|AFH01437.1| RNA polymerase beta'' subunit
            (chloroplast) [Nelumbo nucifera]
            gi|519666902|gb|AGO98514.1| RNA polymerase beta' subunit
            (chloroplast) [Nelumbo nucifera]
            gi|725824033|gb|AIY33812.1| RNA polymerase beta'' subunit
            (chloroplast) [Nelumbo nucifera]
          Length = 1390

 Score =  159 bits (401), Expect = 1e-36
 Identities = 84/116 (72%), Positives = 94/116 (81%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVHR 
Sbjct: 1278 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHRS 1337

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRYNDTSEQSFTGFTDS 187
              H+NI LEI+KKNLFEG  +      +++  F   + F   +DTSEQSFTGF DS
Sbjct: 1338 RQHNNIPLEIKKKNLFEGEMRDILFHHKELFHFCIPKNF---HDTSEQSFTGFNDS 1390


>ref|YP_740640.1| RNA polymerase beta'' subunit [Nandina domestica]
            gi|122165971|sp|Q09FX1.1|RPOC2_NANDO RecName:
            Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            (chloroplast) [Nandina domestica]
            gi|114054460|gb|ABI49853.1| RNA polymerase beta'' subunit
            (chloroplast) [Nandina domestica]
          Length = 1377

 Score =  159 bits (401), Expect = 1e-36
 Identities = 87/121 (71%), Positives = 94/121 (77%), Gaps = 5/121 (4%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVHR 
Sbjct: 1265 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1324

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKF-----PRYNDTSEQSFTGFTD 190
            S HSNISLEI+  NLFEGG         + I F H + F       ++DTSEQ FTGF D
Sbjct: 1325 SQHSNISLEIQNTNLFEGG--------MRDILFHHRELFYSCIPKNFHDTSEQKFTGFID 1376

Query: 189  S 187
            S
Sbjct: 1377 S 1377


>ref|YP_784376.1| RNA polymerase beta' subunit [Drimys granadensis]
            gi|122164451|sp|Q06H07.1|RPOC2_DRIGR RecName:
            Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            (chloroplast) [Drimys granadensis]
            gi|112032652|gb|ABH88287.1| RNA polymerase beta' subunit
            (chloroplast) [Drimys granadensis]
          Length = 1381

 Score =  137 bits (344), Expect(2) = 1e-36
 Identities = 69/78 (88%), Positives = 73/78 (93%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVHR 
Sbjct: 1277 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1336

Query: 354  SLHSNISLEIEKKNLFEG 301
               +NI LEI+KKNLFEG
Sbjct: 1337 RQDNNIPLEIKKKNLFEG 1354



 Score = 43.1 bits (100), Expect(2) = 1e-36
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -3

Query: 323  KRRIYSRGGIRDILFHHKKLLDSCISKNFHDT 228
            K++    G IRDILFHH++L  SCI  NFH+T
Sbjct: 1347 KKKNLFEGEIRDILFHHRELFGSCIPNNFHNT 1378


>ref|YP_009114859.1| RNA polymerase beta' subunit [Thalictrum coreanum]
            gi|721136295|gb|AIX03506.1| RNA polymerase beta' subunit
            (plastid) [Thalictrum coreanum]
          Length = 1377

 Score =  158 bits (399), Expect = 2e-36
 Identities = 87/116 (75%), Positives = 93/116 (80%), Gaps = 5/116 (4%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG++P+GTGFKGLVHRL
Sbjct: 1268 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMVPVGTGFKGLVHRL 1327

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKF-----PRYNDTSEQSFT 202
            S HSNISLEIEKKNLFEGG           I F H + F       ++DTSEQSFT
Sbjct: 1328 SQHSNISLEIEKKNLFEGG--------MGDILFHHKELFDSCIPKNFHDTSEQSFT 1375


>ref|YP_004563857.1| RNA polymerase beta' subunit [Nelumbo lutea]
            gi|224474124|gb|ACN49313.1| RNA polymerase beta' subunit
            (chloroplast) [Nelumbo lutea] gi|383286882|gb|AFH01531.1|
            RNA polymerase beta'' subunit (chloroplast) [Nelumbo
            lutea]
          Length = 1390

 Score =  158 bits (399), Expect = 2e-36
 Identities = 84/116 (72%), Positives = 94/116 (81%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVHR 
Sbjct: 1278 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1337

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRYNDTSEQSFTGFTDS 187
              H+NI LEI+KKNLFEG  +      +++  F   + F   +DTSEQSFTGF DS
Sbjct: 1338 RQHNNIPLEIKKKNLFEGEMRDILFHHKELFHFCIPKNF---HDTSEQSFTGFNDS 1390


>sp|Q7YJY0.1|RPOC2_CALFG RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            (chloroplast) [Calycanthus floridus var. glaucus]
            gi|32399369|emb|CAD28711.1| RNA polymerase beta'
            subunit-2 [Calycanthus floridus var. glaucus]
          Length = 1377

 Score =  136 bits (342), Expect(2) = 2e-36
 Identities = 68/78 (87%), Positives = 73/78 (93%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG++P+GTGFKGLV R 
Sbjct: 1274 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMMPVGTGFKGLVRRS 1333

Query: 354  SLHSNISLEIEKKNLFEG 301
              H+NI LEI+KKNLFEG
Sbjct: 1334 RQHNNIPLEIKKKNLFEG 1351



 Score = 42.7 bits (99), Expect(2) = 2e-36
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -3

Query: 323  KRRIYSRGGIRDILFHHKKLLDSCISKNFHDT 228
            K++    G +RDILFHH++L DSCI  NF DT
Sbjct: 1344 KKKNLFEGEMRDILFHHRELFDSCIPNNFPDT 1375


>ref|NP_862744.2| RNA polymerase beta'' subunit [Calycanthus floridus var. glaucus]
          Length = 1373

 Score =  136 bits (342), Expect(2) = 2e-36
 Identities = 68/78 (87%), Positives = 73/78 (93%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG++P+GTGFKGLV R 
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMMPVGTGFKGLVRRS 1329

Query: 354  SLHSNISLEIEKKNLFEG 301
              H+NI LEI+KKNLFEG
Sbjct: 1330 RQHNNIPLEIKKKNLFEG 1347



 Score = 42.7 bits (99), Expect(2) = 2e-36
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -3

Query: 323  KRRIYSRGGIRDILFHHKKLLDSCISKNFHDT 228
            K++    G +RDILFHH++L DSCI  NF DT
Sbjct: 1340 KKKNLFEGEMRDILFHHRELFDSCIPNNFPDT 1371


>gb|AKZ23941.1| RNA polymerase beta'' subunit (plastid) [Ipomoea leptophylla]
          Length = 1386

 Score =  156 bits (395), Expect = 5e-36
 Identities = 78/102 (76%), Positives = 87/102 (85%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            +ASLNTQSFISEASFQETARVLAKAAL+GRIDWLKGLKENVVLGGVIP GTGF+GLVH  
Sbjct: 1283 KASLNTQSFISEASFQETARVLAKAALQGRIDWLKGLKENVVLGGVIPAGTGFRGLVHPS 1342

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRY 229
              ++N+SLE  KKNLFEGG +RYFVP QKII     +K P+Y
Sbjct: 1343 KQYNNLSLETTKKNLFEGGGERYFVPSQKIIRLFPFKKIPQY 1384


>ref|YP_009026871.1| RNA polymerase beta'' subunit (plastid) [Magnolia tripetala]
            gi|608608394|gb|AHW51948.1| RNA polymerase beta'' subunit
            (plastid) [Magnolia tripetala]
          Length = 1382

 Score =  156 bits (395), Expect = 5e-36
 Identities = 83/116 (71%), Positives = 94/116 (81%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVHR 
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRYNDTSEQSFTGFTDS 187
              H+NI LEI+KKNLFEG  +      ++++     + F   +DTSEQSFTGF DS
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNF---HDTSEQSFTGFNDS 1382


>gb|AGW96497.1| RNA polymerase beta' subunit (chloroplast) [Ipomoea batatas]
          Length = 1386

 Score =  156 bits (395), Expect = 5e-36
 Identities = 78/102 (76%), Positives = 87/102 (85%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            +ASLNTQSFISEASFQETARVLAKAAL+GRIDWLKGLKENVVLGGVIP GTGF+GLVH  
Sbjct: 1283 KASLNTQSFISEASFQETARVLAKAALQGRIDWLKGLKENVVLGGVIPAGTGFRGLVHPS 1342

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRY 229
              ++N+SLE  KKNLFEGG +RYFVP QKII     +K P+Y
Sbjct: 1343 KQYNNLSLETTKKNLFEGGGERYFVPSQKIIRLFPFKKIPQY 1384


>ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia grandiflora]
            gi|372862833|gb|AEX98909.1| RNA polymerase beta subunit-2
            (chloroplast) [Magnolia grandiflora]
            gi|372863003|gb|AEX99077.1| RNA polymerase beta subunit-2
            (chloroplast) [Magnolia grandiflora]
          Length = 1382

 Score =  156 bits (395), Expect = 5e-36
 Identities = 83/116 (71%), Positives = 94/116 (81%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVHR 
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRYNDTSEQSFTGFTDS 187
              H+NI LEI+KKNLFEG  +      ++++     + F   +DTSEQSFTGF DS
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNF---HDTSEQSFTGFNDS 1382


>ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis
            subsp. biloba] gi|372862494|gb|AEX98574.1| RNA polymerase
            beta subunit-2 (chloroplast) [Magnolia officinalis subsp.
            biloba] gi|372862579|gb|AEX98658.1| RNA polymerase beta
            subunit-2 (chloroplast) [Magnolia officinalis subsp.
            biloba] gi|372862664|gb|AEX98742.1| RNA polymerase beta
            subunit-2 (chloroplast) [Magnolia officinalis subsp.
            biloba]
          Length = 1382

 Score =  156 bits (395), Expect = 5e-36
 Identities = 83/116 (71%), Positives = 94/116 (81%)
 Frame = -2

Query: 534  RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPIGTGFKGLVHRL 355
            RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IP+GTGFKGLVHR 
Sbjct: 1270 RASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGMIPVGTGFKGLVHRS 1329

Query: 354  SLHSNISLEIEKKNLFEGGHQRYFVPPQKIIGFLHLQKFPRYNDTSEQSFTGFTDS 187
              H+NI LEI+KKNLFEG  +      ++++     + F   +DTSEQSFTGF DS
Sbjct: 1330 RQHNNIPLEIKKKNLFEGEMRDILFHHRELLSSCIPKNF---HDTSEQSFTGFNDS 1382