BLASTX nr result

ID: Aconitum23_contig00037884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00037884
         (648 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888355.1| expressed protein [Arabidopsis lyrata subsp....    51   3e-06

>ref|XP_002888355.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334196|gb|EFH64614.1| expressed protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 90

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 29/51 (56%), Positives = 32/51 (62%)
 Frame = +1

Query: 208 LYRSRKD*ALLS*SYSFIRHAVFSIHSLSGSVVVLQTLPMVWTNPLLHPNV 360
           LYRS K   +LS  +S      F    LSGSVVVLQTLP +WTNP LH NV
Sbjct: 41  LYRSGKQKKMLS-EFSLDTTCYFFHSFLSGSVVVLQTLPRIWTNPFLHTNV 90



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
 Frame = +2

Query: 86  FFLFPYN----LSFSALSIYSLDPSMNWFF 163
           FF F +N    + + ++ IYSLDP+ N FF
Sbjct: 5   FFFFSWNQENWVFYPSIYIYSLDPNWNSFF 34


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