BLASTX nr result
ID: Aconitum23_contig00037785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00037785
(558 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera] 263 4e-68
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 241 2e-61
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 241 2e-61
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 235 1e-59
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 233 3e-59
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 232 8e-59
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 231 2e-58
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 231 2e-58
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 230 4e-58
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 228 1e-57
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 228 1e-57
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 228 1e-57
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 225 1e-56
gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subc... 224 3e-56
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 224 3e-56
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 222 8e-56
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 222 8e-56
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo... 221 1e-55
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 221 1e-55
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 220 4e-55
>emb|CAN76948.1| hypothetical protein VITISV_017167 [Vitis vinifera]
Length = 467
Score = 263 bits (672), Expect = 4e-68
Identities = 115/184 (62%), Positives = 144/184 (78%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+LIYSD+WGP S G RYY+SFLDD TK+LW+FP+KLKS+ F +F +ERQF
Sbjct: 150 LELIYSDIWGPAPVLSTSGARYYISFLDDATKFLWIFPLKLKSNACQTFIHFQAIVERQF 209
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
+TK+KA+Q+DW GEYR LQ GI HRI+CP+TH+Q AIERRH Q+VE+GL+LLAH
Sbjct: 210 DTKIKALQSDWDGEYRSITKHLQNQGISHRITCPYTHQQASAIERRHXQIVEVGLALLAH 269
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
NLP +WED F++A ++INRL TPIL ++SP+E+VHH DY+FL FGCACWPYLRPY
Sbjct: 270 YNLPKIFWEDVFLTAVFIINRLXTPILQHRSPYEMVHHHKXDYNFLXAFGCACWPYLRPY 329
Query: 542 NRHK 553
NRHK
Sbjct: 330 NRHK 333
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 241 bits (615), Expect = 2e-61
Identities = 103/184 (55%), Positives = 141/184 (76%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+LI+SDVWGP A S+ RYYVSF+DD++K++W++ +K KS+V F F +ERQF
Sbjct: 392 LELIHSDVWGP-ASDSVGAKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQF 450
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
N K+ +QTDWGGEY+ +Q+GI H++SCPHTH+Q GA+ER+HR +VEIGLSLLAH
Sbjct: 451 NRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAH 510
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AF++ATYLINRLP +++ +P + H+ PDY LR FGCACWP LRPY
Sbjct: 511 ASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRTFGCACWPNLRPY 570
Query: 542 NRHK 553
N HK
Sbjct: 571 NTHK 574
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 241 bits (615), Expect = 2e-61
Identities = 103/184 (55%), Positives = 141/184 (76%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+LI+SDVWGP A S+ RYYVSF+DD++K++W++ +K KS+V F F +ERQF
Sbjct: 503 LELIHSDVWGP-ASDSVGAKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQF 561
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
N K+ +QTDWGGEY+ +Q+GI H++SCPHTH+Q GA+ER+HR +VEIGLSLLAH
Sbjct: 562 NRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAH 621
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AF++ATYLINRLP +++ +P + H+ PDY LR FGCACWP LRPY
Sbjct: 622 ASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLFHQQPDYKSLRTFGCACWPNLRPY 681
Query: 542 NRHK 553
N HK
Sbjct: 682 NTHK 685
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 235 bits (599), Expect = 1e-59
Identities = 100/184 (54%), Positives = 141/184 (76%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+LI+SDVWGP +ES + +YYVSF+DD++K++W++ +K KS+V F F K +ERQF
Sbjct: 502 LELIHSDVWGPASES-VGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQKLVERQF 560
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
+ K+ ++QTDWGGEY ++GI H +SCPHTH+Q GA+ER+HR +VE+GLSLLAH
Sbjct: 561 DRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAH 620
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AF++ATYLINRLP+ ++ +P E + + PDY LR FGCACWP LRPY
Sbjct: 621 ASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLERLFKQTPDYKSLRTFGCACWPNLRPY 680
Query: 542 NRHK 553
N HK
Sbjct: 681 NTHK 684
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 233 bits (595), Expect = 3e-59
Identities = 98/184 (53%), Positives = 141/184 (76%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++SDVWGP ES + N+YYVSF+DDF+K+ W++ +K KS+V F F +ER F
Sbjct: 515 LELVFSDVWGPAPES-VGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMF 573
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
+ K+ A+QTDWGGEY+ ++GI H +SCPHTH+Q G+ ER+HR ++E+GLSLL++
Sbjct: 574 DRKIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSY 633
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AFV+ATYLINR+P+ + N +P E + ++ PDY LRVFGCACWP+LRPY
Sbjct: 634 ASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKLFNQKPDYLSLRVFGCACWPHLRPY 693
Query: 542 NRHK 553
N HK
Sbjct: 694 NTHK 697
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 232 bits (592), Expect = 8e-59
Identities = 101/184 (54%), Positives = 139/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++SDVWGP ES + +YYVSF+DDF+K+ W++ I+ KS V F F +ERQF
Sbjct: 509 LELVFSDVWGPAPES-VGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQF 567
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
+ K+ A+QTDWGGEY+ ++GI H +SCPHTH+Q G+ ER+HR +VEIGLSLL+H
Sbjct: 568 DRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSH 627
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AF ATYLINR+P+ +++N SP E + + PDYS LR+FGCACWP LRPY
Sbjct: 628 ASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYSSLRIFGCACWPNLRPY 687
Query: 542 NRHK 553
N HK
Sbjct: 688 NNHK 691
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 231 bits (588), Expect = 2e-58
Identities = 96/184 (52%), Positives = 139/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++SDVWGP ES + N+YYVSF+DDF+K+ W++ +K KS+V F F +ER F
Sbjct: 518 LELVFSDVWGPAPES-VGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMF 576
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
+ K+ A+QTDWGGEY+ Q+GI H +SCPHTH+Q G+ ER+H+ ++E+GLSLL++
Sbjct: 577 DRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSY 636
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AFV+ATYLINR+P+ + N +P E + ++ PDYS LRVF C CWP+L PY
Sbjct: 637 ASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPY 696
Query: 542 NRHK 553
N HK
Sbjct: 697 NTHK 700
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 231 bits (588), Expect = 2e-58
Identities = 96/184 (52%), Positives = 139/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++SDVWGP ES + N+YYVSF+DDF+K+ W++ +K KS+V F F +ER F
Sbjct: 518 LELVFSDVWGPAPES-VGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMF 576
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
+ K+ A+QTDWGGEY+ Q+GI H +SCPHTH+Q G+ ER+H+ ++E+GLSLL++
Sbjct: 577 DRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSY 636
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AFV+ATYLINR+P+ + N +P E + ++ PDYS LRVF C CWP+L PY
Sbjct: 637 ASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPY 696
Query: 542 NRHK 553
N HK
Sbjct: 697 NTHK 700
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 230 bits (586), Expect = 4e-58
Identities = 100/184 (54%), Positives = 139/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++SDVWGP A S+ N+YYVSF+DD++K+ W++ +K KS+V F F +ER F
Sbjct: 513 LELVFSDVWGP-APQSVGNNKYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERLF 571
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
N K+ A+QTDWGGEY+ ++GI H +SCPHTH+Q G+ ER+HR +VE+GL+LLA+
Sbjct: 572 NRKIVAMQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAY 631
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
S++PL +W +AF+SA YLINR P+ +L++ SP E + PDY+ LRVFGCACWP LRPY
Sbjct: 632 SSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNALRVFGCACWPNLRPY 691
Query: 542 NRHK 553
N+HK
Sbjct: 692 NKHK 695
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 228 bits (582), Expect = 1e-57
Identities = 96/184 (52%), Positives = 138/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+LI++D+WGP + S +G++YY+ F+D ++++ W++ +K KS+ +F +F Q+E Q
Sbjct: 563 LELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQL 622
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
K+KA+Q+DWGGEYR F L GI HRISCP+THEQ G ER+HR +VE G++LLA
Sbjct: 623 GHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQ 682
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
++LP YW++AF ++ YLINRLPTP+L NKSP E++ H+ P YS L+VFGC C+P LRP+
Sbjct: 683 ASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPF 742
Query: 542 NRHK 553
N HK
Sbjct: 743 NHHK 746
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 228 bits (582), Expect = 1e-57
Identities = 102/184 (55%), Positives = 138/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+LIYSDVWGP A +S+ G +YYVSF+ D++K+ WL+ IK KS+V F F +ER F
Sbjct: 515 LELIYSDVWGP-ALTSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLF 573
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
N K+ A+Q+DWGGEY ++GI H +SCPHTH+Q G+ ER+HR +VE+GL+LLA+
Sbjct: 574 NRKIIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAY 633
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
S++PL +W++AF +A YLINR PT +L +P E + ++ PDYS LRVFGCACWP+LRPY
Sbjct: 634 SSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLEHLFNQTPDYSSLRVFGCACWPHLRPY 693
Query: 542 NRHK 553
N HK
Sbjct: 694 NTHK 697
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 228 bits (581), Expect = 1e-57
Identities = 98/184 (53%), Positives = 138/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++SDVWGP A S+ G +YYVSF+DDF+K+ W++ +K KS+V F F + +ER F
Sbjct: 506 LELVFSDVWGP-APDSVGGRKYYVSFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLVERIF 564
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
K+ A+QTDWGGEY ++GI H +SCPHTH+Q G+ ER+HR +VE+GLSLLAH
Sbjct: 565 YRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAH 624
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AF++ATYLINR P+ ++ ++P E + H+ P Y+ LRVFGCACWP LRPY
Sbjct: 625 ASMPLKFWDEAFIAATYLINRTPSKVIQYETPLEHLFHQKPSYTSLRVFGCACWPNLRPY 684
Query: 542 NRHK 553
N K
Sbjct: 685 NARK 688
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 225 bits (574), Expect = 1e-56
Identities = 99/184 (53%), Positives = 137/184 (74%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++S WGP ES + +YYVSF+DDF+K+ W++ ++ KS V F F IER F
Sbjct: 387 LELVFS--WGPAPES-VGRKKYYVSFIDDFSKFTWIYLLQHKSQVFEKFQEFQVMIERLF 443
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
+ K+ A+QTDWGGEYR ++GI H +SCPHTH+Q G+ ER+HR +VE+GLSLL+H
Sbjct: 444 DRKILAMQTDWGGEYRALNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEVGLSLLSH 503
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AF +ATYLINR+P+ ++ N +P E H+ PDYS LRVFGCACWP LRPY
Sbjct: 504 AHMPLKFWDEAFQAATYLINRVPSRVIQNTTPLEKFFHQKPDYSSLRVFGCACWPNLRPY 563
Query: 542 NRHK 553
N+HK
Sbjct: 564 NKHK 567
>gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1001
Score = 224 bits (570), Expect = 3e-56
Identities = 97/183 (53%), Positives = 132/183 (72%)
Frame = +2
Query: 5 DLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQFN 184
+L+YSDVWGP A S+ YYVSF+DDF+K+ W++ +K KS+V F FL +ER +
Sbjct: 255 ELVYSDVWGP-ATDSVGRKNYYVSFIDDFSKFTWIYFLKYKSEVLQKFQEFLSFVERLLD 313
Query: 185 TKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAHS 364
K+ A+QTDWGGEY ++GI HR+SCPH H+Q GA ER+HR +VE+GL+LLAH+
Sbjct: 314 RKIIAMQTDWGGEYEKLNSFFTKIGISHRVSCPHAHQQNGAAERKHRHIVEVGLALLAHA 373
Query: 365 NLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPYN 544
++PL +W++AF +ATYLINR P +N +P E + H+ P+Y+ LR FGCACWP LRPYN
Sbjct: 374 SMPLKFWDEAFCTATYLINRTPAKTINFDTPLERLFHQKPEYASLRTFGCACWPNLRPYN 433
Query: 545 RHK 553
K
Sbjct: 434 SKK 436
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 224 bits (570), Expect = 3e-56
Identities = 95/184 (51%), Positives = 137/184 (74%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++SDVWGP A S+ G +YYVSF+DDF+K+ W++ +K KS+V F F + +ER F
Sbjct: 430 LELVFSDVWGP-APDSVGGRKYYVSFIDDFSKFTWIYLLKKKSEVLQKFSEFQQLVERLF 488
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
N K+ A+Q+DWGGEY ++GI H +SCP+ H+Q G+ ER+HR +VE+GLSLLAH
Sbjct: 489 NRKIIAMQSDWGGEYEKLNAIFTKIGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAH 548
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AF++ATYLINR P+ ++ +P E + ++ P+YS LR FGCACWP LRPY
Sbjct: 549 ASMPLKFWDEAFLTATYLINRTPSKVIQYSTPLERLLNQKPNYSSLRTFGCACWPNLRPY 608
Query: 542 NRHK 553
N K
Sbjct: 609 NNRK 612
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 222 bits (566), Expect = 8e-56
Identities = 96/184 (52%), Positives = 139/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+LIYSDVWGP A +S G ++YVSF+D + K+ W++ +K KSDV F +F + +ER F
Sbjct: 408 LELIYSDVWGP-ASTSFGGKKFYVSFIDSYRKFSWIYFLKHKSDVFEKFHDFQQLVERLF 466
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
+ K+ A+QTDWGGEY+ +++GI H +SCPHTH+Q G+ ER+HR +VE+GL+LLA+
Sbjct: 467 DRKIIAMQTDWGGEYQKLNSFFEKIGISHHVSCPHTHQQNGSAERKHRLIVEVGLALLAY 526
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL YW++AF++AT++INR+P+ IL +P E + + DYS R+FGCACWP LRPY
Sbjct: 527 ASMPLKYWDEAFLAATHIINRIPSRILQYDTPLECLFNHKLDYSSFRIFGCACWPNLRPY 586
Query: 542 NRHK 553
N HK
Sbjct: 587 NAHK 590
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 222 bits (566), Expect = 8e-56
Identities = 94/184 (51%), Positives = 139/184 (75%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++SDVWGP A S+ +YYVSF+DDF+K+ W++ +K KS+V + F F +++ER F
Sbjct: 126 LELVFSDVWGP-APVSVESRKYYVSFIDDFSKFTWIYLLKNKSEVFSKFHEFQQRVERLF 184
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
N K+ ++QTDWGGEY ++GI H +SCP+ H+Q G+ ER+HR +VE+GL+LLAH
Sbjct: 185 NRKIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLAH 244
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
+++PL +W++AF++ATYLINRLP+ ++ +P E + + P+YS LR FGCACWP LRPY
Sbjct: 245 ASVPLKFWDEAFLAATYLINRLPSKVIQYSAPLERLLDQKPNYSALRTFGCACWPNLRPY 304
Query: 542 NRHK 553
N+ K
Sbjct: 305 NKRK 308
>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1429
Score = 221 bits (564), Expect = 1e-55
Identities = 101/184 (54%), Positives = 132/184 (71%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+LIY D+WGP S G +YY+SF+D F+KY+W++ + KS+ TIF F E Q
Sbjct: 570 LELIYCDLWGPAPMQSSMGYKYYISFIDAFSKYIWVYFLHDKSETLTIFKQFKALAELQL 629
Query: 182 NTKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAH 361
NTK+KAIQ+DWGGE+R F L QLGI HRI CPHTH Q G +ER+HR +VE+GLSLL+H
Sbjct: 630 NTKIKAIQSDWGGEFRSFTSYLSQLGIIHRIICPHTHHQNGVVERKHRHIVEMGLSLLSH 689
Query: 362 SNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPY 541
S+LP YW+ AF +A Y+INRLP N+ P +++ + +PDY+FLR FGCAC+P L PY
Sbjct: 690 SSLPYHYWDHAFHTAVYIINRLPAS-HNHCIPLKVLFNNVPDYNFLRAFGCACYPLLTPY 748
Query: 542 NRHK 553
N K
Sbjct: 749 NNPK 752
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 221 bits (564), Expect = 1e-55
Identities = 97/182 (53%), Positives = 134/182 (73%)
Frame = +2
Query: 8 LIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQFNT 187
L++SD+WGP G RY+V F+DD T++ WL+ + K + F F IE QF+T
Sbjct: 493 LVHSDLWGPAPVVGTNGARYFVLFVDDHTRFSWLYLLAFKDQAISGFLQFKVMIETQFDT 552
Query: 188 KLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAHSN 367
K++ +QT+WGGE++ F TL + GI HR+SCP T +Q G +ER+HR VVE+GLSLLAH++
Sbjct: 553 KVRMLQTNWGGEFQAFTNTLCKFGILHRVSCPSTSQQNGRVERKHRHVVEVGLSLLAHAS 612
Query: 368 LPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPYNR 547
+PL YW AF SA YLINRLP+ +LN SP++ ++H LP+YSFLRV+GC C+P+LRP+NR
Sbjct: 613 IPLKYWPFAFQSALYLINRLPSSVLNFSSPYKTLYHCLPNYSFLRVYGCTCYPFLRPFNR 672
Query: 548 HK 553
HK
Sbjct: 673 HK 674
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 220 bits (560), Expect = 4e-55
Identities = 95/183 (51%), Positives = 132/183 (72%)
Frame = +2
Query: 5 DLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQFN 184
+L++SDVW P +S G +YY++F+D FT Y W++P + KS +I F+ ++R+F
Sbjct: 503 ELVFSDVWEPAHTTSCDGYKYYIAFVDAFTNYTWIYPRQQKSQATSIVLQFIALVDRKFP 562
Query: 185 TKLKAIQTDWGGEYRHFKYTLQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLLAHS 364
TKLK +QTDWGGE+ + LQ+ GI R CPH H+Q G +ER+HR +VEIGL+LLA S
Sbjct: 563 TKLKCLQTDWGGEFHPLQSLLQKKGILFRHPCPHVHQQNGKVERKHRSIVEIGLTLLAKS 622
Query: 365 NLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACWPYLRPYN 544
LP ++W AF +ATYL+NRLPTP+L+ K+P+EL+ PD+ FL+ FGCAC+PYLRPY
Sbjct: 623 QLPFTFWWHAFSTATYLLNRLPTPVLHCKTPYELLFKSSPDFLFLKTFGCACYPYLRPYK 682
Query: 545 RHK 553
HK
Sbjct: 683 NHK 685
Score = 118 bits (296), Expect = 2e-24
Identities = 54/176 (30%), Positives = 102/176 (57%), Gaps = 2/176 (1%)
Frame = +2
Query: 2 LDLIYSDVWGPCAESSIYGNRYYVSFLDDFTKYLWLFPIKLKSDVATIFPNFLKQIERQF 181
L+L++ D++GP S+ G Y +DDF++Y W+ + KS+ F F +++ +
Sbjct: 1095 LELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNEK 1154
Query: 182 NTKLKAIQTDWGGEYRHFKYT--LQQLGIQHRISCPHTHEQGGAIERRHRQVVEIGLSLL 355
+ I++D G E+ +F + + GI H S P T +Q G +ER++R + E+ ++L
Sbjct: 1155 GFSITCIRSDHGREFENFDFEEYCNKHGINHNFSAPRTPQQNGVVERKNRTLQEMARTML 1214
Query: 356 AHSNLPLSYWEDAFVSATYLINRLPTPILNNKSPFELVHHRLPDYSFLRVFGCACW 523
+NLP +W +A ++ Y++NR+ + K+P+EL ++ P+ S+ +VFGC C+
Sbjct: 1215 NENNLPKYFWAEAVNTSCYVLNRILLRPILKKTPYELWKNKKPNISYFKVFGCKCF 1270