BLASTX nr result

ID: Aconitum23_contig00036616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00036616
         (354 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004292190.1| PREDICTED: putative pentatricopeptide repeat...    59   2e-06

>ref|XP_004292190.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Fragaria vesca subsp. vesca]
          Length = 634

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
 Frame = +1

Query: 61  RPSSATTVYLMLRKIAPLTSSSPLGHTTHSKIQSFSSFPIPQI---TDLEKLVIRRCKSP 231
           RP+S+ +      K++ L+++      T S   + +  PIP +   T LE  +   CKS 
Sbjct: 23  RPTSSNST-----KLSSLSTNQVAAKPTSSTPTTSAKDPIPSVPIQTPLESFLQTNCKSG 77

Query: 232 TFGLEEAVTLFNALFHLQPLPSIIPFTRLLSAISKRNHHS 351
            F L EAV  F+ + H+QPLP +  F RLL  ++K  H+S
Sbjct: 78  DFTLNEAVHYFDHMIHMQPLPRMASFNRLLGGLAKSKHYS 117


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