BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00035562
         (742 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   262   2e-67
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun...   252   2e-64
ref|XP_013457822.1| RNA-dependent RNA polymerase family protein ...   251   4e-64
ref|XP_003608944.2| RNA-dependent RNA polymerase family protein ...   251   4e-64
ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phas...   249   1e-63
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen...   249   2e-63
gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gos...   248   2e-63
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...   248   2e-63
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]              247   7e-63
gb|KOM32828.1| hypothetical protein LR48_Vigan01g238400 [Vigna a...   246   1e-62
emb|CDP19325.1| unnamed protein product [Coffea canephora]            246   1e-62
ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [G...   245   2e-62
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]              245   2e-62
ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   244   6e-62
gb|KRH57045.1| hypothetical protein GLYMA_05G035900 [Glycine max]     242   2e-61
gb|KHN48606.1| RNA-dependent RNA polymerase 2 [Glycine soja]          242   2e-61
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   242   2e-61
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th...   239   1e-60
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...   238   2e-60
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [F...   238   2e-60

>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
           gi|297733815|emb|CBI15062.3| unnamed protein product
           [Vitis vinifera]
          Length = 1127

 Score =  262 bits (669), Expect = 2e-67
 Identities = 136/248 (54%), Positives = 175/248 (70%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPER RVEFWV   GE YK+ V FDDVL +SA CL G   NALLL+LKYAPK+++K  GP
Sbjct: 133 MPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGGKVNALLLKLKYAPKIFQKFAGP 192

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSI-SVDILTSFPLY 384
           N+A+KFSADRYH+ KE+ EFLW+R TDFS+IKS+G S+SFCW+ +    ++DI  SFP Y
Sbjct: 193 NIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPALDIFASFPYY 252

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPS-DSLNYEILFQLNALVHLQKISFAVVNTXXX 207
           K +L  L+L + E +C  S +VPL++C S   L YEILFQLN+LVH QKIS A V+T   
Sbjct: 253 K-DLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLVHAQKISLAAVDTDLI 311

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                    +A  ILQKL+  +ST YDP+ FI++Q H +    K+LP SS +RL  +N+M
Sbjct: 312 EILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKNLPPSSHSRLTNNNVM 371

Query: 26  SCHRALIT 3
           SCHR L+T
Sbjct: 372 SCHRVLVT 379


>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
           gi|462407047|gb|EMJ12511.1| hypothetical protein
           PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score =  252 bits (643), Expect = 2e-64
 Identities = 130/249 (52%), Positives = 173/249 (69%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPERKRVEFWV  + E YK+ + F++++ +    L GE  NALLL+LK+ P+++RK+ GP
Sbjct: 133 MPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGEKVNALLLKLKFGPRIFRKISGP 192

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSISV-DILTSFPLY 384
           NVAA+FS DRYH+CK++F+FLWVR TDFS +KSIG+S+SFCW+ E   SV D+   FP Y
Sbjct: 193 NVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSVSDVFECFPYY 252

Query: 383 K-GELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXX 210
           K  ++  L L   EKYC  SE VPL++C SDS L YEILFQLNALVH QKIS A  ++  
Sbjct: 253 KDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLNALVHSQKISLAATDSDL 312

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                     +   +L+KL+  ++TCYDP+ F++ QLH L +  K  PS  + RL+E N+
Sbjct: 313 IEFLSGLSVDTTNVLLEKLHKRKTTCYDPLSFLKMQLHVLERNHKSRPSPYK-RLMEHNV 371

Query: 29  MSCHRALIT 3
           MSCHR LIT
Sbjct: 372 MSCHRVLIT 380


>ref|XP_013457822.1| RNA-dependent RNA polymerase family protein [Medicago truncatula]
           gi|657390297|gb|KEH31853.1| RNA-dependent RNA polymerase
           family protein [Medicago truncatula]
          Length = 1123

 Score =  251 bits (641), Expect = 4e-64
 Identities = 126/249 (50%), Positives = 169/249 (67%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCL-EGEATNALLLQLKYAPKVYRKVFG 564
           MPER+R++FWV    + +K+ + F+++L    +C  EG   NALLL+L+Y P++Y+K+ G
Sbjct: 135 MPERQRLDFWVTHGDQCFKLEIPFENILECDGYCSDEGSKPNALLLKLRYGPRIYQKMAG 194

Query: 563 PNVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKF-ERSISVDILTSFPL 387
           PNVAAKF  DRY  CKENFEF+WVR TDFS +KSIGHS+SF W+  E S   D+  SFPL
Sbjct: 195 PNVAAKFKDDRYRFCKENFEFMWVRTTDFSTLKSIGHSTSFFWEIVEESFDSDVFRSFPL 254

Query: 386 YKGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXX 210
           Y+  L  LSL   EK+C  +E VPL++C  DS L YE LFQLN+LVH QKIS A VN   
Sbjct: 255 YRENLKDLSLEDGEKFCSPTETVPLVKCRLDSKLPYESLFQLNSLVHTQKISLASVNDEL 314

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                     +   I QKL+ + STCY+P+ ++++QLH L  K K +  S + RL+++N+
Sbjct: 315 IDLLASLDAETKAVIFQKLHKMNSTCYEPLKYVRTQLHVLSIKKKSVLPSQQKRLVDNNI 374

Query: 29  MSCHRALIT 3
           MSCHRALIT
Sbjct: 375 MSCHRALIT 383


>ref|XP_003608944.2| RNA-dependent RNA polymerase family protein [Medicago truncatula]
           gi|657390296|gb|AES91141.2| RNA-dependent RNA polymerase
           family protein [Medicago truncatula]
          Length = 1277

 Score =  251 bits (641), Expect = 4e-64
 Identities = 126/249 (50%), Positives = 169/249 (67%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCL-EGEATNALLLQLKYAPKVYRKVFG 564
           MPER+R++FWV    + +K+ + F+++L    +C  EG   NALLL+L+Y P++Y+K+ G
Sbjct: 135 MPERQRLDFWVTHGDQCFKLEIPFENILECDGYCSDEGSKPNALLLKLRYGPRIYQKMAG 194

Query: 563 PNVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKF-ERSISVDILTSFPL 387
           PNVAAKF  DRY  CKENFEF+WVR TDFS +KSIGHS+SF W+  E S   D+  SFPL
Sbjct: 195 PNVAAKFKDDRYRFCKENFEFMWVRTTDFSTLKSIGHSTSFFWEIVEESFDSDVFRSFPL 254

Query: 386 YKGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXX 210
           Y+  L  LSL   EK+C  +E VPL++C  DS L YE LFQLN+LVH QKIS A VN   
Sbjct: 255 YRENLKDLSLEDGEKFCSPTETVPLVKCRLDSKLPYESLFQLNSLVHTQKISLASVNDEL 314

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                     +   I QKL+ + STCY+P+ ++++QLH L  K K +  S + RL+++N+
Sbjct: 315 IDLLASLDAETKAVIFQKLHKMNSTCYEPLKYVRTQLHVLSIKKKSVLPSQQKRLVDNNI 374

Query: 29  MSCHRALIT 3
           MSCHRALIT
Sbjct: 375 MSCHRALIT 383


>ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
           gi|561028757|gb|ESW27397.1| hypothetical protein
           PHAVU_003G198500g [Phaseolus vulgaris]
          Length = 1119

 Score =  249 bits (636), Expect = 1e-63
 Identities = 124/249 (49%), Positives = 171/249 (68%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEAT-NALLLQLKYAPKVYRKVFG 564
           +P+R++++F V+  G+ Y++ + F+D+L +  +CL  E   NALLL+LK+ PK+Y+K  G
Sbjct: 133 VPQRRKLDFLVLHDGDCYRVEIFFEDILESHGYCLGAEGKLNALLLKLKFGPKIYKKKMG 192

Query: 563 PNVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKF-ERSISVDILTSFPL 387
           P+VA KF  DRYH CKE+ EFLWVR TDFSA+KSIGHS+SFCW+  E  ++ D+ TS PL
Sbjct: 193 PDVATKFRNDRYHFCKEDSEFLWVRTTDFSALKSIGHSTSFCWEIAEEQLASDVFTSLPL 252

Query: 386 YKGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXX 210
           YK  L  L L   E++C ++E VPL++C S S L YE LFQLN+LVH QKIS A V+   
Sbjct: 253 YKENLRDLVLEDGEEFCSSTEAVPLVKCASQSKLPYEALFQLNSLVHTQKISLASVDDEL 312

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                         I QKL+ +  TCYDP+ F+++QLH L  K +  P SS+ RLI++N+
Sbjct: 313 IDLLGGLDEEIRAVIFQKLHQMGFTCYDPLKFVKTQLHVLSNKKRSQPLSSQKRLIDNNI 372

Query: 29  MSCHRALIT 3
           MSCHRAL+T
Sbjct: 373 MSCHRALVT 381


>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
           [Prunus mume]
          Length = 1100

 Score =  249 bits (635), Expect = 2e-63
 Identities = 129/249 (51%), Positives = 171/249 (68%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPERKRVEFWV  + E YK+ + F++++ +    L GE  NALLL+LK+ P+++RK+ GP
Sbjct: 115 MPERKRVEFWVWLRDECYKLEIAFENIMESFGCRLGGEKVNALLLKLKFGPRIFRKISGP 174

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSISV-DILTSFPLY 384
           NVAA+FS DRYH+CK++F+FLWVR TDFS +KSIG+S+SFCW+ E   S+ D+   FP Y
Sbjct: 175 NVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSLSDVFECFPYY 234

Query: 383 K-GELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXX 210
           K  ++  L L   EKYC  SE VPL++C SDS L YEILFQLNALVH QKIS A  ++  
Sbjct: 235 KDNDVVDLILDNGEKYCSPSETVPLVKCGSDSKLPYEILFQLNALVHSQKISLAATDSDL 294

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                     +   +L+KL+  ++TCYDP  F++ QLH L +  K  PS  + RL E N+
Sbjct: 295 IEFLSGLSVDTTNVLLEKLHKRKTTCYDPQSFLKMQLHVLERNHKSRPSPYK-RLTEHNV 353

Query: 29  MSCHRALIT 3
           MSCHR LIT
Sbjct: 354 MSCHRVLIT 362


>gb|KHG14638.1| RNA-dependent RNA polymerase 2 -like protein [Gossypium arboreum]
          Length = 1147

 Score =  248 bits (634), Expect = 2e-63
 Identities = 132/248 (53%), Positives = 170/248 (68%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPER+R+EFWV   GE YK+   FDD+  T   C +G A NALLL+++YAP++YRKV GP
Sbjct: 135 MPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCFDGSACNALLLRVRYAPRIYRKVSGP 194

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSISV-DILTSFPLY 384
           NVA+KFS DRYH+CKE F+FLWVR TDFS IKSIG S+SF W+F    S+ D+ T  P Y
Sbjct: 195 NVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMSTYLPCY 254

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXXX 207
           + ++   SL    ++   SE+VPL++ PSDS L YEILFQLNALVH QKIS A V+T   
Sbjct: 255 REDIQSPSLEARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLI 314

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                    +A  ILQKL +++S CY+PV F++++L   GK  + +P S   RL   N+M
Sbjct: 315 GILSVLPVETAVMILQKLRLLQSPCYNPVSFVKAKL-PTGKNYR-IPLSVSERLKNHNVM 372

Query: 26  SCHRALIT 3
           SCHRALIT
Sbjct: 373 SCHRALIT 380


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cicer arietinum]
          Length = 1122

 Score =  248 bits (634), Expect = 2e-63
 Identities = 123/248 (49%), Positives = 168/248 (67%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPER R++FWV    + +K+ + F+++L    +  +G   NALLL+LKY P++Y+++ GP
Sbjct: 135 MPERNRLDFWVTHHDQCFKLEIPFENILECDGFSSDGSKPNALLLKLKYGPRIYQRMEGP 194

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKF-ERSISVDILTSFPLY 384
           NV+AKF ADRY  CKE+F F+WVR TDFS +KSIGHS+SFCW+  E S   D+  SFPLY
Sbjct: 195 NVSAKFKADRYRFCKEDFAFMWVRTTDFSRLKSIGHSTSFCWEIEEESSDSDVFRSFPLY 254

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXXX 207
           +  L  LSL   E++C  +E VPL++C  D+ L YE LFQLN+LVH QKIS A V+    
Sbjct: 255 RENLKDLSLEDGEEFCSPTETVPLVKCRLDTKLPYEALFQLNSLVHTQKISLASVDDELI 314

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                    +   I QKL+ + STCY+P+ F+++QLH L  K K L  SS+ RL ++N+M
Sbjct: 315 DLIASLDDETKAVIFQKLHKMSSTCYEPLRFVKTQLHVLSIKKKSLRPSSQKRLADNNIM 374

Query: 26  SCHRALIT 3
           SCHRALIT
Sbjct: 375 SCHRALIT 382


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  247 bits (630), Expect = 7e-63
 Identities = 132/248 (53%), Positives = 169/248 (68%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPER+R+EFWV   GE YK+   FDD+  T   C +G A NALLL+++YAP+ YRKV GP
Sbjct: 135 MPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCFDGSACNALLLRVRYAPRTYRKVSGP 194

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSISV-DILTSFPLY 384
           NVA+KFS DRYH+CKE F+FLWVR TDFS IKSIG S+SF W+F    S+ D+ T  P Y
Sbjct: 195 NVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMSTYLPCY 254

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXXX 207
           + ++   SL    ++   SE+VPL++ PSDS L YEILFQLNALVH QKIS A V+T   
Sbjct: 255 REDIQSPSLEARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLI 314

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                    +A  ILQKL +++S CY+PV F++++L   GK  + +P S   RL   N+M
Sbjct: 315 GILSVLPVETAVMILQKLRLLQSPCYNPVSFVKAKL-PTGKNFR-IPLSVSERLKNHNVM 372

Query: 26  SCHRALIT 3
           SCHRALIT
Sbjct: 373 SCHRALIT 380


>gb|KOM32828.1| hypothetical protein LR48_Vigan01g238400 [Vigna angularis]
          Length = 1119

 Score =  246 bits (628), Expect = 1e-62
 Identities = 123/247 (49%), Positives = 170/247 (68%), Gaps = 3/247 (1%)
 Frame = -3

Query: 734 ERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEAT-NALLLQLKYAPKVYRKVFGPN 558
           +R+R++F V   G+ Y++ + F+D+L    +CL  EA  NA+LL+LK+ P++Y+K  GP+
Sbjct: 135 QRRRLDFLVWHDGDCYRLEIFFEDILECHGYCLGEEAKLNAILLKLKFGPRIYKKKTGPD 194

Query: 557 VAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERS-ISVDILTSFPLYK 381
           VA KF +DRYH CKE+ EFLWVR TDFSA+KSIGHS+SFCW+ E   ++ D+ TSFPLYK
Sbjct: 195 VATKFKSDRYHFCKEDSEFLWVRTTDFSALKSIGHSTSFCWEIEEEHLASDVFTSFPLYK 254

Query: 380 GELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXXXX 204
             +  L+L   E++C ++E VPL++C S S L YE LFQLN+LVH QKIS A V+     
Sbjct: 255 ENMTDLALEDGEEFCSSTEAVPLVKCASQSKLPYEALFQLNSLVHTQKISLASVDDELID 314

Query: 203 XXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLMS 24
                       I QKL+ +  TCY+P+ F+++QLH L  K K  P SS+ RL ++N+MS
Sbjct: 315 LLGGLDEEIRAVIFQKLHQMGFTCYEPLKFVKTQLHVLSNKKKSPPQSSQKRLTDNNIMS 374

Query: 23  CHRALIT 3
           CHRALIT
Sbjct: 375 CHRALIT 381


>emb|CDP19325.1| unnamed protein product [Coffea canephora]
          Length = 1120

 Score =  246 bits (627), Expect = 1e-62
 Identities = 125/248 (50%), Positives = 168/248 (67%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPER  +EFW+   GE YK+ VQF DVL +   CL+ +  NA+LL+LK+APK+Y+K  GP
Sbjct: 135 MPERNILEFWLSHGGECYKLEVQFGDVLESCGCCLDDQNPNAVLLKLKHAPKIYQKFSGP 194

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSIS-VDILTSFPLY 384
           NVAAKFSADRYH CKE+F+F+WVR TDFS+IKSIG+SSS C + E  +S +D+ T+ P  
Sbjct: 195 NVAAKFSADRYHTCKEDFDFIWVRTTDFSSIKSIGYSSSLCLEIEEGLSGLDLFTNLPYC 254

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSD-SLNYEILFQLNALVHLQKISFAVVNTXXX 207
                 L+L   E++  TSE+VPL++C SD  + YEILFQLN+LVH QK+S   VN+   
Sbjct: 255 SRFFLELTLEEGEQFSTTSELVPLVKCCSDIKITYEILFQLNSLVHTQKLSLGAVNSELM 314

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                     A  ILQK++ + + CYDPV FI  +LH +G+   +L SSS  R   +N+M
Sbjct: 315 EVLSGLDMDIAMPILQKMHKLETMCYDPVSFINKRLHVMGENASNLRSSSYGRPKNNNMM 374

Query: 26  SCHRALIT 3
           +CHR L+T
Sbjct: 375 TCHRVLVT 382


>ref|XP_012440441.1| PREDICTED: RNA-dependent RNA polymerase 2 [Gossypium raimondii]
           gi|763786137|gb|KJB53208.1| hypothetical protein
           B456_008G296900 [Gossypium raimondii]
          Length = 1147

 Score =  245 bits (626), Expect = 2e-62
 Identities = 130/248 (52%), Positives = 169/248 (68%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPER+R+EFWV   GE YK+   FDD+  T   C +G A NALLL+++YAP++Y+KV GP
Sbjct: 135 MPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGSACNALLLRVRYAPRIYQKVSGP 194

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSISV-DILTSFPLY 384
           NVA+KFS DRYH+CKE F+FLWVR TDFS IKSIG S+SF W+F    S+ D+ T  P Y
Sbjct: 195 NVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMSTYLPCY 254

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXXX 207
           + ++   SL    ++   SE+VPL++ PSDS L YEILFQLNALVH QKIS A V+T   
Sbjct: 255 REDIQSPSLEARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLI 314

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                    +A  ILQKL +++S CY+PV F++++L   GK  + +P S   RL   N+M
Sbjct: 315 GILSGLPVETAVMILQKLRLLQSPCYNPVSFVKAKL-PTGKNYR-IPLSVSERLKNHNVM 372

Query: 26  SCHRALIT 3
           SC RALIT
Sbjct: 373 SCRRALIT 380


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  245 bits (626), Expect = 2e-62
 Identities = 130/248 (52%), Positives = 169/248 (68%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPER+R+EFWV   GE YK+   FDD+  T   C +G A NALLL+++YAP++Y+KV GP
Sbjct: 135 MPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGSACNALLLRVRYAPRIYQKVSGP 194

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSISV-DILTSFPLY 384
           NVA+KFS DRYH+CKE F+FLWVR TDFS IKSIG S+SF W+F    S+ D+ T  P Y
Sbjct: 195 NVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSISDMSTYLPCY 254

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXXX 207
           + ++   SL    ++   SE+VPL++ PSDS L YEILFQLNALVH QKIS A V+T   
Sbjct: 255 REDIQSPSLEARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKISIAAVDTDLI 314

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                    +A  ILQKL +++S CY+PV F++++L   GK  + +P S   RL   N+M
Sbjct: 315 GILSGLPVETAVMILQKLRLLQSPCYNPVSFVKAKL-PTGKNYR-IPLSVSERLKNHNVM 372

Query: 26  SCHRALIT 3
           SC RALIT
Sbjct: 373 SCRRALIT 380


>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
           gi|720051127|ref|XP_010271988.1| PREDICTED:
           RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score =  244 bits (622), Expect = 6e-62
 Identities = 133/249 (53%), Positives = 166/249 (66%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPERKRVEF+V    E YK+ + F DV   S + L G  +NALLL+L+YAPK+Y+K+ G 
Sbjct: 132 MPERKRVEFFVFKGKECYKLEINFSDVFTASGYRLRGRQSNALLLRLRYAPKIYQKISGS 191

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERS-ISVDILTSFPLY 384
            VA+KFS DRYH+CKE+ EFLWVR TDFS   SIG SSSFCW+ E   +S DIL SFP Y
Sbjct: 192 TVASKFSTDRYHICKEDVEFLWVRTTDFSESNSIGWSSSFCWELEEGLLSSDILRSFPYY 251

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISF-AVVNTXX 210
           K ELG L + + E++C  SE+VPLI    DS L YEIL+QLN+LVH QK+S  AV +   
Sbjct: 252 KEELGDLIVEKEEQFCCESELVPLINSGLDSTLAYEILYQLNSLVHTQKVSLRAVKSDDL 311

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                     +A   L +L+ ++STCYDP+  IQ QL  L +  K L SSS+  L E NL
Sbjct: 312 IEILCCLSVDTANGFLLQLHKMKSTCYDPLPIIQRQLSSLLRNQKSLLSSSQRGLREGNL 371

Query: 29  MSCHRALIT 3
           MSCHR L+T
Sbjct: 372 MSCHRVLVT 380


>gb|KRH57045.1| hypothetical protein GLYMA_05G035900 [Glycine max]
          Length = 1193

 Score =  242 bits (618), Expect = 2e-61
 Identities = 123/249 (49%), Positives = 169/249 (67%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEAT-NALLLQLKYAPKVYRKVFG 564
           +P RKR++FWV   G+ Y++   F+D+L +  +CL  +A  NALLL++K+ P++Y+K  G
Sbjct: 206 LPLRKRLDFWVWHNGDCYRLEFLFEDILESHGYCLGEDAKLNALLLKMKFGPRIYKKKTG 265

Query: 563 PNVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKF-ERSISVDILTSFPL 387
            +VAAKF  DRY  CKE+FEFLWVR TDFS +KSIGHS+SFCW+  E  +++D+  SFPL
Sbjct: 266 ADVAAKFRGDRYRFCKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPL 325

Query: 386 YKGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXX 210
           YK  L  L+L   E++C ++E VPL++  S S L YE LFQLN+LVH QKIS A V+   
Sbjct: 326 YKENLRDLALEDGEEFCSSTEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDEL 385

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                     +   I  KL+ +  TCY+P+ F+++QLH L  K K LP SS+ RL + N+
Sbjct: 386 IDLLAGLDEETRAVIFLKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNI 445

Query: 29  MSCHRALIT 3
           MSCHRALIT
Sbjct: 446 MSCHRALIT 454


>gb|KHN48606.1| RNA-dependent RNA polymerase 2 [Glycine soja]
          Length = 1130

 Score =  242 bits (618), Expect = 2e-61
 Identities = 123/249 (49%), Positives = 169/249 (67%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEAT-NALLLQLKYAPKVYRKVFG 564
           +P RKR++FWV   G+ Y++   F+D+L +  +CL  +A  NALLL++K+ P++Y+K  G
Sbjct: 143 LPLRKRLDFWVWHNGDCYRLEFLFEDILESHGYCLGEDAKLNALLLKMKFGPRIYKKKTG 202

Query: 563 PNVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKF-ERSISVDILTSFPL 387
            +VAAKF  DRY  CKE+FEFLWVR TDFS +KSIGHS+SFCW+  E  +++D+  SFPL
Sbjct: 203 ADVAAKFRGDRYRFCKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPL 262

Query: 386 YKGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXX 210
           YK  L  L+L   E++C ++E VPL++  S S L YE LFQLN+LVH QKIS A V+   
Sbjct: 263 YKENLRDLALEDGEEFCSSTEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDEL 322

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                     +   I  KL+ +  TCY+P+ F+++QLH L  K K LP SS+ RL + N+
Sbjct: 323 IDLLAGLDEETRAVIFLKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNI 382

Query: 29  MSCHRALIT 3
           MSCHRALIT
Sbjct: 383 MSCHRALIT 391


>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
           max]
          Length = 1121

 Score =  242 bits (618), Expect = 2e-61
 Identities = 123/249 (49%), Positives = 169/249 (67%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEAT-NALLLQLKYAPKVYRKVFG 564
           +P RKR++FWV   G+ Y++   F+D+L +  +CL  +A  NALLL++K+ P++Y+K  G
Sbjct: 134 LPLRKRLDFWVWHNGDCYRLEFLFEDILESHGYCLGEDAKLNALLLKMKFGPRIYKKKTG 193

Query: 563 PNVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKF-ERSISVDILTSFPL 387
            +VAAKF  DRY  CKE+FEFLWVR TDFS +KSIGHS+SFCW+  E  +++D+  SFPL
Sbjct: 194 ADVAAKFRGDRYRFCKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLALDVFKSFPL 253

Query: 386 YKGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXX 210
           YK  L  L+L   E++C ++E VPL++  S S L YE LFQLN+LVH QKIS A V+   
Sbjct: 254 YKENLRDLALEDGEEFCSSTEAVPLVKRASQSKLPYEALFQLNSLVHTQKISLASVDDEL 313

Query: 209 XXXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNL 30
                     +   I  KL+ +  TCY+P+ F+++QLH L  K K LP SS+ RL + N+
Sbjct: 314 IDLLAGLDEETRAVIFLKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSSQKRLTDSNI 373

Query: 29  MSCHRALIT 3
           MSCHRALIT
Sbjct: 374 MSCHRALIT 382


>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
           gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
           polymerase 2 isoform 1 [Theobroma cacao]
           gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
           2 isoform 1 [Theobroma cacao]
           gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
           2 isoform 1 [Theobroma cacao]
          Length = 1149

 Score =  239 bits (611), Expect = 1e-60
 Identities = 121/248 (48%), Positives = 168/248 (67%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPER+R+EFW+ + GE YK+ V FDDVL T   C  G + NALLL++KYAP++Y+KV GP
Sbjct: 140 MPERRRLEFWLWNNGECYKLEVLFDDVLETVGCCFNGSSCNALLLRVKYAPRIYQKVSGP 199

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERS-ISVDILTSFPLY 384
           N+A+K   DRYH+CKENF+FLWVR TDFS  K++G S++F W+     +++D+ + F  Y
Sbjct: 200 NIASKLRPDRYHICKENFDFLWVRTTDFSRTKAVGQSTAFYWEINAELLTLDLFSCFSCY 259

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSDS-LNYEILFQLNALVHLQKISFAVVNTXXX 207
           + ++  L+L    ++    E+VPL++ PSDS L YEILFQLN+LVH QKIS A V+T   
Sbjct: 260 REDMKGLTLKGGGEFSSAPEIVPLVKGPSDSKLAYEILFQLNSLVHTQKISIASVDTDLI 319

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                    +A  ILQK + + STCY+PV F++  L    +  +  P SS  RLI+ N+M
Sbjct: 320 DILRVLAVETAVMILQKFHKLLSTCYNPVSFVKENLPVSERNFQSRPLSSFKRLIDHNVM 379

Query: 26  SCHRALIT 3
           SCHRAL+T
Sbjct: 380 SCHRALVT 387


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
           gi|222868578|gb|EEF05709.1| hypothetical protein
           POPTR_0015s08500g [Populus trichocarpa]
          Length = 1110

 Score =  238 bits (608), Expect = 2e-60
 Identities = 119/249 (47%), Positives = 167/249 (67%), Gaps = 3/249 (1%)
 Frame = -3

Query: 740 MPERKRVEFWV-VDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFG 564
           MPER+R+EFW+ V +   YK+VV+F+D+L    + L+G+  NA++L+L+Y P++Y+K+ G
Sbjct: 134 MPERRRIEFWIRVGQEFRYKLVVEFEDILEAVGYPLDGDKVNAVVLKLRYGPRIYQKISG 193

Query: 563 PNVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSISV-DILTSFPL 387
           P +A+KFS +RY  CKE+F+FLWVR TD SAIKSIG S+SFCW+    +   D   +FP 
Sbjct: 194 PGIASKFSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDTFRNFPY 253

Query: 386 YKGELGVLSLTRLEKYCITSEVVPLIQCPSDSLNYEILFQLNALVHLQKISFAVVNTXXX 207
           Y+ ++  L L   E++C  SE VPLI+C SD L YE+LFQLN+LVH QKIS A V++   
Sbjct: 254 YQEDMNRLDLEDGEEFCSASETVPLIRCGSDKLAYEVLFQLNSLVHTQKISLAAVDSDLI 313

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHD-LGKKPKHLPSSSETRLIEDNL 30
                    +A  ILQKL+ ++ TCYDP+ F++  L + L   PK         L E+N+
Sbjct: 314 KILRNLTVNTAIIILQKLHKLKMTCYDPLSFVKQSLRESLSSPPK--------SLTENNI 365

Query: 29  MSCHRALIT 3
           MSCHRALIT
Sbjct: 366 MSCHRALIT 374


>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [Fragaria vesca subsp.
           vesca]
          Length = 1136

 Score =  238 bits (608), Expect = 2e-60
 Identities = 118/248 (47%), Positives = 168/248 (67%), Gaps = 2/248 (0%)
 Frame = -3

Query: 740 MPERKRVEFWVVDKGETYKMVVQFDDVLATSAWCLEGEATNALLLQLKYAPKVYRKVFGP 561
           MPERKRVEFWV   G+ YKM + F++++ +   CL G+  NAL L+LK+ PK++R++ GP
Sbjct: 136 MPERKRVEFWVWRVGDCYKMEIAFENIVESVGCCLGGDKVNALRLKLKFGPKIFRQLSGP 195

Query: 560 NVAAKFSADRYHLCKENFEFLWVRCTDFSAIKSIGHSSSFCWKFERSI-SVDILTSFPLY 384
           NVA+KFSADRYH+CKE+F++LWVRCTDFS +KSIGHS++FCW+ +  + +  + T+FP +
Sbjct: 196 NVASKFSADRYHVCKEDFDYLWVRCTDFSEMKSIGHSTAFCWEIQEDVAAAGVFTTFPSF 255

Query: 383 KGELGVLSLTRLEKYCITSEVVPLIQCPSD-SLNYEILFQLNALVHLQKISFAVVNTXXX 207
           + ++  L         + SE VPL++C +D    YEILFQLN LVH QKIS A V +   
Sbjct: 256 RKDVVDLMFEDGGDCLLVSETVPLVKCEADMKFPYEILFQLNVLVHAQKISLAAVGSDLI 315

Query: 206 XXXXXXXXXSAYTILQKLYMVRSTCYDPVHFIQSQLHDLGKKPKHLPSSSETRLIEDNLM 27
                    +A  +L+KL  +++TCYDP+ F++ QL  L +  K   S  + RL+E N+M
Sbjct: 316 EFFGGLSMDTANVLLEKLQKLKTTCYDPLSFVKVQLQLLERNSKKRLSPHQ-RLMEHNVM 374

Query: 26  SCHRALIT 3
           SCHR LIT
Sbjct: 375 SCHRVLIT 382