BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00034625
         (806 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622...    92   1e-18
ref|XP_007206694.1| hypothetical protein PRUPE_ppa024911mg [Prun...    95   4e-18
ref|XP_008234850.1| PREDICTED: putative ribonuclease H protein A...    92   2e-17
ref|XP_008245804.1| PREDICTED: uncharacterized protein LOC103343...    89   3e-17
ref|XP_008391252.1| PREDICTED: putative ribonuclease H protein A...    88   4e-17
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A...    89   7e-17
ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein A...    86   3e-16
ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein A...    86   5e-16
ref|XP_012065448.1| PREDICTED: uncharacterized protein LOC105628...    76   8e-16
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608...    87   1e-15
ref|XP_008340321.1| PREDICTED: putative ribonuclease H protein A...    83   1e-15
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    83   2e-15
ref|XP_008393540.1| PREDICTED: putative ribonuclease H protein A...    85   2e-15
ref|XP_008359109.1| PREDICTED: putative ribonuclease H protein A...    88   2e-15
ref|XP_008231382.1| PREDICTED: putative ribonuclease H protein A...    87   4e-15
ref|XP_008339024.1| PREDICTED: putative ribonuclease H protein A...    84   4e-15
ref|XP_010026656.1| PREDICTED: uncharacterized protein LOC104417...    87   5e-15
ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein A...    82   5e-15
ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein A...    82   5e-15
ref|XP_009146521.1| PREDICTED: putative ribonuclease H protein A...    83   6e-15

>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
          Length = 1160

 Score = 92.4 bits (228), Expect(2) = 1e-18
 Identities = 61/200 (30%), Positives = 90/200 (45%)
 Frame = -1

Query: 668  ASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNS 489
            A  SS  S+ N    IWSL  P KI  F+WR  K  L ++ENL  RK+      C LC  
Sbjct: 797  AMPSSSESSKNEWNIIWSLALPKKIRIFVWRAAKNLLPSAENLWKRKIVQEPT-CQLCKM 855

Query: 488  GVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISSDCRNQHLDLIAFG 309
            G++  FH   +C+ +K+ W L      +          L+ G  +     N  +DL A  
Sbjct: 856  GIENVFHALVDCKAAKKVWRLSLFYIDIQAAPGQDILSLLHG--VKRMRSNADVDLFAVM 913

Query: 308  LWSIWLSRHEVIFKHCTPNPKTSSASCLAYYQAYGKSNNLPLHQTHYYTPSSSVAWIPPQ 129
            LW+ W +R++ +FK    NP++  A   A  +AY +               + + W PPQ
Sbjct: 914  LWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQPSADVSHGKQQKVAQLGWNPPQ 973

Query: 128  AGRLKINIDGSWSDFIGSAG 69
             G +KIN D + +     AG
Sbjct: 974  EGFVKINTDAATNSEKNLAG 993



 Score = 28.9 bits (63), Expect(2) = 1e-18
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 789 LPDDSIYWYFTGSGNYNVKSDYR 721
           L +D + W+F  SG Y VKS Y+
Sbjct: 766 LREDELIWHFGKSGQYTVKSGYQ 788


>ref|XP_007206694.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
           gi|462402336|gb|EMJ07893.1| hypothetical protein
           PRUPE_ppa024911mg [Prunus persica]
          Length = 378

 Score = 94.7 bits (234), Expect(2) = 4e-18
 Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
 Frame = -1

Query: 698 GLIPSKFGGTASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTS 519
           G+I  K  G  S  S  S   P K+IW+L  P KI  FIWR Y+  LA  ENLR R++  
Sbjct: 189 GVIGKKGKGECSNQSGQSG--PWKHIWALQVPPKIQMFIWRCYRNVLAVRENLRRRRVDV 246

Query: 518 SSQHCHLCNSGVDTCFHIFSECQFSKQFWYLFPC-LDGLWMVIEGKHFKLVWGALISSDC 342
            +  C LC +   T  H+F  C+ ++ FW+  P  LD     +EG+ F   W  L+    
Sbjct: 247 EAD-CLLCGNNGKTEVHLFFRCEIARLFWFASPSHLD--VHGVEGEDFLSCWECLLQKFA 303

Query: 341 RNQHLD----LIAFGLWSIWLSRHEVIFKHCTPNP 249
           + + +D    ++AFGLW IW  R+ V+F+  + +P
Sbjct: 304 QVEKMDEILQIVAFGLWRIWKWRNAVVFERQSLDP 338



 Score = 24.6 bits (52), Expect(2) = 4e-18
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 768 WYFTGSGNYNVKSDY 724
           W+FT  G Y VKS Y
Sbjct: 165 WHFTKYGGYTVKSGY 179


>ref|XP_008234850.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 1009

 Score = 92.0 bits (227), Expect(2) = 2e-17
 Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 7/215 (3%)
 Frame = -1

Query: 674  GTASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLC 495
            G    SS +S +   K +W +  P K+  FIWR    FLA   NLR R++  + + C  C
Sbjct: 665  GAGEASSSSSQSAVWKSVWHVDAPPKLKAFIWRGCSNFLAVRHNLRRRRVPCTGE-CGFC 723

Query: 494  NSGVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISSDCRNQH----L 327
                +T  HIF EC F++ FW+  P L      + G  F   W  ++++   ++H    +
Sbjct: 724  GFQDETQAHIFFECDFARAFWFASP-LQLDVSKLAGDDFISTWQHMMTTLNSSEHAAEAI 782

Query: 326  DLIAFGLWSIWLSRHEVIFKHCTPNPKTSSASCLAYYQAYGKS-NNLPLHQTHYYTPSSS 150
                FGLW IW +R+  +F     +P  +    L     +  +  +L        +  + 
Sbjct: 783  QWFVFGLWRIWKARNLAVFDGVQADPIEAVLLLLKQVSEFRTAKQDLQPQALQPVSSPAP 842

Query: 149  VAWIPPQAGRLKINIDGSWS--DFIGSAGRICRNS 51
            ++W  P  G LK+N D +WS     G  G + R+S
Sbjct: 843  LSWCKPPPGLLKVNCDAAWSAQRLGGGVGWVIRDS 877



 Score = 25.0 bits (53), Expect(2) = 2e-17
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDYRV 718
           D + W+F+  G Y V+S Y +
Sbjct: 631 DKLIWHFSMHGRYTVRSGYEL 651


>ref|XP_008245804.1| PREDICTED: uncharacterized protein LOC103343954 [Prunus mume]
          Length = 455

 Score = 89.4 bits (220), Expect(2) = 3e-17
 Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 16/227 (7%)
 Frame = -1

Query: 683 KFGGTASGSSCNSNANPL-KYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQH 507
           + G  A G +   N   + K IW L  P KI  F+W+  +  LA  ENL  R +   +  
Sbjct: 164 ELGRKAEGETNQGNQQRIWKSIWGLPVPPKIRTFLWKCCRNVLAVKENLLHRGIDVDTT- 222

Query: 506 CHLCNSGVDTCFHIFSECQFSKQFWYLFPC-LDGLWMVIEGKHFKLVWGALISSDCRNQH 330
           C LC    ++  H+F  C+F++ FW+  P  LD    ++ G+ F   W  L+S   + +H
Sbjct: 223 CTLCGREGESQVHLFFTCEFARLFWFASPLQLDP--SLVVGEDFIGCWANLLSKYEQVEH 280

Query: 329 ----LDLIAFGLWSIWLSRHEVIFKHCTPNPKTSSASCLAYYQAYGKS--------NNLP 186
               L   AFGLW IW +R+ ++F+    +P+ +        Q +  +        N LP
Sbjct: 281 YSEILQACAFGLWRIWKTRNGMVFEGQVTDPRDAVECFKNQVQEFRIARMCVKPLINELP 340

Query: 185 LHQTHYYTPSSSVAWIPPQAGRLKINIDGSW--SDFIGSAGRICRNS 51
                   P +S  W  P +G  K+N D +W     +GS G + R+S
Sbjct: 341 RPPEAQAEPVTS--WQKPPSGVFKVNCDATWMAQTGMGSVGWVVRDS 385



 Score = 27.3 bits (59), Expect(2) = 3e-17
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 786 PDDSIYWYFTGSGNYNVKSDYRV 718
           PD  + W+FT  G Y V+S Y V
Sbjct: 134 PDKQV-WHFTSHGGYTVRSGYEV 155


>ref|XP_008391252.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 623

 Score = 88.2 bits (217), Expect(2) = 4e-17
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
 Frame = -1

Query: 674 GTASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLC 495
           G  + S+ +++    K IW+L  P KI  FIWR     LA   NL+ R +   +  C +C
Sbjct: 275 GRGAPSTHHTSNQVWKGIWNLQVPNKIKFFIWRCCNKALAVRHNLKRRHMRIDNV-CGVC 333

Query: 494 NSGVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISSDCRNQHLDLI- 318
           N   ++  H+F  C  S++ W+  P L    + + G  F   W    +S    +  + I 
Sbjct: 334 NLVDESENHLFFRCDLSQRLWFCSP-LHLYSIELIGADFLESWNNFCTSIKDREDAEAIL 392

Query: 317 ---AFGLWSIWLSRHEVIFK--HCTPNP-KTSSASCLAYYQAYGKSNNLP--LHQTHYYT 162
              AFGLW IW +R++V+FK  HC PN   T     +  Y+      +L     + H   
Sbjct: 393 QEFAFGLWRIWKNRNDVVFKGSHCQPNEILTVWRKNIGEYREAMNRGSLEECAVRPHQPP 452

Query: 161 PSSSVAWIPPQAGRLKINIDGSW--SDFIGSAGRICRN 54
           P   + W  P+ G  K+N D +W  + +   AG + R+
Sbjct: 453 PKMPMLWEKPKFGSFKLNTDAAWCCTSYRAGAGWVIRD 490



 Score = 27.7 bits (60), Expect(2) = 4e-17
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDYRV 718
           D + W+ T  G+Y+VK+ YRV
Sbjct: 241 DRLVWHHTVDGSYSVKTGYRV 261


>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 494

 Score = 89.0 bits (219), Expect(2) = 7e-17
 Identities = 60/229 (26%), Positives = 101/229 (44%)
 Frame = -1

Query: 704 YEGLIPSKFGGTASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKL 525
           Y+  +  KF  + + S+ +S++N    IW L  P KI  FIWR  K  L T+ENL  RK+
Sbjct: 185 YQVALKLKFPYSPNCSNSSSSSN-WSVIWKLTLPAKIKIFIWRAAKNLLPTAENLWKRKI 243

Query: 524 TSSSQHCHLCNSGVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISSD 345
              + +C  C + V+   H    C+ +K+ W L P       +        + G L    
Sbjct: 244 VHEA-YCKRCGNRVENTLHALITCKAAKKVWQLSPMASSFQEMGNPD----ILGDLGGKK 298

Query: 344 CRNQHLDLIAFGLWSIWLSRHEVIFKHCTPNPKTSSASCLAYYQAYGKSNNLPLHQTHYY 165
                ++++   LW IW  R++++F+    +P+ S A   A  +A+ ++    +      
Sbjct: 299 LSRADMEMLMTILWVIWYDRNKLVFEDLKLDPRLSMAKAEAINEAFRRTQFPEITNEGKL 358

Query: 164 TPSSSVAWIPPQAGRLKINIDGSWSDFIGSAGRICRNSVASSLRHSTPK 18
                  W PP  G LK+N+D +       AG      + + +R ST K
Sbjct: 359 QKLKQTVWTPPPQGWLKLNVDATTDSNKSCAG------LGAIIRDSTGK 401



 Score = 26.2 bits (56), Expect(2) = 7e-17
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 783 DDSIYWYFTGSGNYNVKSDYRV 718
           +D + W++   G Y +KS Y+V
Sbjct: 166 EDEVIWHYDKRGKYTMKSGYQV 187


>ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 887

 Score = 85.5 bits (210), Expect(2) = 3e-16
 Identities = 64/223 (28%), Positives = 94/223 (42%), Gaps = 16/223 (7%)
 Frame = -1

Query: 674  GTASGSSCNSNANPLKY---IWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHC 504
            G      C+    P K    IW L  P K+  FIWR     LA   NL  R++  ++  C
Sbjct: 617  GRKGTGGCSRRDEPBKRWMEIWRLEVPNKMKFFIWRCCXSSLAVRGNLHRRRMRVNTA-C 675

Query: 503  HLCNSGVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISSDCRNQHLD 324
             LC    +T  H+F EC+FS+ FW+  P    +     GK F   W  L +   + ++  
Sbjct: 676  VLCGDARETEHHLFFECEFSRVFWFSCPLQLDITFA-SGKEFGDCWHXLCNRFRKEKNHV 734

Query: 323  LI----AFGLWSIWLSRHEVIFKHCTPNP-------KTSSASCLAYYQAYGKSNNLPLHQ 177
            LI     F +W IW  R++++FK    NP       +       A ++    SN +    
Sbjct: 735  LILQECVFIMWRIWKCRNDLMFKGMEANPMESVNVVRNQIMXYRAAHETAKMSNAVGARG 794

Query: 176  THYYTPSSSVAWIPPQAGRLKINIDGSW--SDFIGSAGRICRN 54
                     V W  P+ G LK+N DG+W  S F    G + R+
Sbjct: 795  ETVSYXGXPVRWKRPRFGVLKVNCDGAWCASTFRXGYGWVVRD 837



 Score = 27.7 bits (60), Expect(2) = 3e-16
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 783 DDSIYWYFTGSGNYNVKSDYRV 718
           DD I W+ T +G+Y V++ Y +
Sbjct: 585 DDRIIWHXTSNGDYTVRTGYGI 606


>ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 812

 Score = 85.5 bits (210), Expect(2) = 5e-16
 Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
 Frame = -1

Query: 623  IWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNSGVDTCFHIFSECQFS 444
            IW L  P K+ +FIWR     LA   NL  R++  ++  C LC    +T  H+F EC+FS
Sbjct: 622  IWRLKVPNKMKYFIWRCCTSSLAARGNLHRRRMRVNTT-CVLCGDAKETEHHLFFECEFS 680

Query: 443  KQFWYLFPCLDGLWMVIEGKHFKLVWGALISSDCRNQHLDLI----AFGLWSIWLSRHEV 276
            + FW+  P    + +    K F   W +L +   + ++ +LI     F +W IW  R+++
Sbjct: 681  RVFWFSCPLQLDIKLATR-KDFGDCWYSLCNRFRKEKNHELILQECVFIMWRIWKCRNDL 739

Query: 275  IFKHCTPNPKTSSASCLAYYQAYGKSNNLPLHQTHYYTPSSSVA-------WIPPQAGRL 117
            +FK    NP  S     +    Y  S++             +V+       W  P+ G +
Sbjct: 740  LFKGTEANPMESVNVVRSQIMEYRASHDPAKMSAIVGVMGEAVSYAGHPVRWKSPKFGVI 799

Query: 116  KINIDGSW 93
            K+N DG+W
Sbjct: 800  KVNCDGAW 807



 Score = 26.9 bits (58), Expect(2) = 5e-16
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 783 DDSIYWYFTGSGNYNVKSDYRV 718
           +D I W+ T +G+Y VK+ Y +
Sbjct: 570 NDRIIWHHTSNGDYTVKTGYGI 591


>ref|XP_012065448.1| PREDICTED: uncharacterized protein LOC105628614 [Jatropha curcas]
          Length = 680

 Score = 75.9 bits (185), Expect(2) = 8e-16
 Identities = 60/217 (27%), Positives = 89/217 (41%), Gaps = 14/217 (6%)
 Frame = -1

Query: 629 KYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNSGVDTCFHIFSECQ 450
           K +WSL  P K+ HF+WR  +  L     L  R L   +  C  C +  +T  H   EC 
Sbjct: 357 KTLWSLQIPPKVRHFLWRCCRDILPVKATLARRGLELDT-GCDYCGT-TETLVHALVECP 414

Query: 449 FSKQFWYLFPCLDGLWMVIEG--------KHFKLVWGALISSDCRNQHLDLIAFGLWSIW 294
                W  F    G+ + I          +H   VW         N+  +    GLWS+W
Sbjct: 415 RVSFCWQFF----GIRLSIGNFPTFLQTLQHLHHVW--------ENEFFESFVMGLWSVW 462

Query: 293 LSRHEVIFKHCTPNPKTSSASCLAYYQAYGKSN-NLPLHQTHYYTPSSSVAWIPPQAGRL 117
           LSR+ + +      P        +   ++ K++  LP   T   TP+S + W PP  G L
Sbjct: 463 LSRNALKWNQEEERPYHVVTRARSMLVSWKKAHLKLPGSGTGTGTPASRI-WCPPPVGTL 521

Query: 116 KINIDGSWSDFI--GSAGRI---CRNSVASSLRHSTP 21
           KIN D +   F+  G+ G +   C +   S+   S P
Sbjct: 522 KINFDATLLPFVGYGAVGAVISNCNSGFVSAATSSLP 558



 Score = 35.8 bits (81), Expect(2) = 8e-16
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -3

Query: 783 DDSIYWYFTGSGNYNVKSDYRVRQMAL*RTDPLQVWRHSLWKLL 652
           D  + W++T SG Y+VKS YR+  +A    D    WR   WK L
Sbjct: 318 DYILIWHWTDSGIYSVKSGYRI--VASQYVDTEDAWRSRFWKTL 359


>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
          Length = 1570

 Score = 87.4 bits (215), Expect(2) = 1e-15
 Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
 Frame = -1

Query: 668  ASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNS 489
            A  +S  ++ N    IW L  P KI  F WR  K  L ++ENL  RK+      C  CN 
Sbjct: 941  AKPTSSATSENQWNAIWLLTLPEKIRIFAWRAAKNLLPSAENLWKRKVIQEPL-CQFCNK 999

Query: 488  GVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISSDCRNQH--LDLIA 315
             ++T FH    C+  K+ W +    D L   +E     L    LI    R     ++L+ 
Sbjct: 1000 KLETIFHALVGCKVVKKIWKITRFEDDLKDSVEQDMLSL----LIELKLRRSKDDIELLV 1055

Query: 314  FGLWSIWLSRHEVIFKHCTPNPKTSSASCLAYYQAYGKSNNLPLHQTHYYTPSSSV--AW 141
              LW IW +++  IFK    +P  + +   A  +A+ ++  LP   TH    SSS   AW
Sbjct: 1056 TILWMIWNAQNSWIFKGVKDSPHVTVSKAEAVLEAFRRTQ-LPA-ATHIDIQSSSKLKAW 1113

Query: 140  IPPQAGRLKINIDGSWSD--FIGSAGRICRNSVAS 42
             PPQ G  K+N+D + +    I S G + R+   +
Sbjct: 1114 KPPQRGHFKVNVDAATNSEKQIASLGAVIRDEAGN 1148



 Score = 23.5 bits (49), Expect(2) = 1e-15
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDYRV 718
           D + W++     Y+VKS Y++
Sbjct: 913 DEVIWHYDRKCQYSVKSGYQI 933


>ref|XP_008340321.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 565

 Score = 83.2 bits (204), Expect(2) = 1e-15
 Identities = 65/210 (30%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
 Frame = -1

Query: 677 GGTASGSSCNSNANPLKY--IWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHC 504
           G    G+   SN   L +  IW L  P KI  FIWR     LA   NL+ R +   +  C
Sbjct: 226 GRKGXGTPSESNKLNLVWNNIWRLXVPNKIKIFIWRCCNNALAVRRNLKRRHMRVDNV-C 284

Query: 503 HLCNSGVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISSDCRNQHLD 324
            +CN+  +T  H+F  C+ S  FW+  P L     V+EG  F   W    +      + D
Sbjct: 285 GVCNAFNETENHLFFRCELSHVFWFCSP-LHLNSHVLEGSDFLESWSNFCAQVKDXINAD 343

Query: 323 LIA----FGLWSIWLSRHEVIFKHCTPNP---------KTSSASCLAYYQAYGKSNNLPL 183
            I     FGLW +W +R++V+FK     P          TS         A   S  LP 
Sbjct: 344 DICQDFXFGLWRLWKNRNDVVFKGIHRQPLDILEAWRKSTSEYKDSLARNADDFSXRLP- 402

Query: 182 HQTHYYTPSSSVAWIPPQAGRLKINIDGSW 93
            +T   T  +   W  P+ G +KIN D +W
Sbjct: 403 -KTSKATALNCTKWQKPRFGTIKINTDAAW 431



 Score = 27.7 bits (60), Expect(2) = 1e-15
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 783 DDSIYWYFTGSGNYNVKSDY 724
           DD + W++T +G Y VKS Y
Sbjct: 194 DDRLVWHYTTNGIYXVKSGY 213


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 82.8 bits (203), Expect(2) = 2e-15
 Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
 Frame = -1

Query: 623  IWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNSGVDTCFHIFSECQFS 444
            IW L  P KI+HF+WR     L+ + NL  R L +  + C  C S  +T  H+  +C F+
Sbjct: 1054 IWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHL-AREKSCVRCPSHGETVNHLLFKCPFA 1112

Query: 443  KQFWYLFPC---LDGLWMVIEGKHFKLVWGALISSDCRNQHLDLIAFGLWSIWLSRHEVI 273
            +  W + P      G W     ++   V     S    + H  LI + LW +W +R++++
Sbjct: 1113 RLTWAISPLPAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLV 1172

Query: 272  FKHCTPNPKTSSASCLAYYQAYGKSNNL--PLHQTHYYTPSSSVAWIPPQAGRLKINIDG 99
            FK       T+    L   +     NN   P  Q    T    V W PP  G +K N DG
Sbjct: 1173 FK---GREFTAPQVILKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDG 1229

Query: 98   SWSDFIGSAG 69
            +WS  +G+ G
Sbjct: 1230 AWSKDLGNCG 1239



 Score = 27.3 bits (59), Expect(2) = 2e-15
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
 Frame = -3

Query: 780  DSIYWYFTGSGNYNVKSDYRV-RQMAL*RTDPLQVWRHSL-------WKL 655
            D   W ++ SG+Y+VKS Y V  ++   R +P +V + SL       WKL
Sbjct: 1008 DRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKL 1057


>ref|XP_008393540.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 424

 Score = 85.1 bits (209), Expect(2) = 2e-15
 Identities = 67/218 (30%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
 Frame = -1

Query: 656 SCNSNANPL-KYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNSGVD 480
           S + N N + K IW+L  P KI  FIWR     LA   NL+   +   +  C +CN   +
Sbjct: 81  SMHHNTNQVWKGIWNLQVPNKIKFFIWRCCNNALAVRHNLKRXHMRIDNV-CGVCNLVDE 139

Query: 479 TCFHIFSECQFSKQFWYLFPC-LDGLWMVIEGKHFKLVWGALISSDCRNQHLDLI----A 315
           +  H+F  C  S   W+  P  L+ + ++  G  F   W    +S    +  + I    A
Sbjct: 140 SENHLFFXCDLSHXLWFCSPLHLNSIELI--GADFLDSWNIFCTSIKDREDAEAIMQEFA 197

Query: 314 FGLWSIWLSRHEVIFK--HCTPNP-KTSSASCLAYYQAYGKSNNL------PLHQTHYYT 162
           FGLW IW +R++V+FK  HC PN   T     +  Y+      +L      PL       
Sbjct: 198 FGLWRIWKNRNDVVFKGSHCQPNEILTVWRKNIGEYREAMNHGSLDEGAVRPLKS----P 253

Query: 161 PSSSVAWIPPQAGRLKINIDGSW--SDFIGSAGRICRN 54
           P     W  PQ G  K+N D SW  + F   AG + R+
Sbjct: 254 PMMPXLWEKPQFGTFKLNTDASWCSASFRAGAGWVIRD 291



 Score = 25.0 bits (53), Expect(2) = 2e-15
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDYRV 718
           D + W+ T  G+Y+VK+ Y V
Sbjct: 42  DRLVWHHTVDGSYSVKTGYGV 62


>ref|XP_008359109.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 422

 Score = 87.8 bits (216), Expect(2) = 2e-15
 Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
 Frame = -1

Query: 629 KYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNSGVDTCFHIFSECQ 450
           K +WSL TP KI  F+W+   G LAT ENL  R+ ++ S  C +C    +T  HIF +C 
Sbjct: 240 KLVWSLKTPPKIRSFMWKTLHGALATMENLAQRR-SAQSPLCPICQLQEETIEHIFLQCP 298

Query: 449 FSKQFWY--LFPCLDGLWMVIEGKHFKLVWGALIS--SDCRNQHLDLIAFGLWSIWLSRH 282
           +    W    F    G+   +   H+ L     +    D   +    IAF  W+IW SR 
Sbjct: 299 WVSVIWRGGCFSLRVGISATVSWAHWLLQVFTSVKGLKDVSLKMFSYIAFTCWNIWKSRC 358

Query: 281 EVIFKHCTPNPK----TSSASCLAYYQAYGKSNNLPLHQTHYYTPSSSVAWIPPQAGRLK 114
            ++F +   NP+     SS S  +Y  A+   +  P   T  +     + W PP  G +K
Sbjct: 359 NLLFNNHQINPRQVIFASSLSASSYTAAHLALS--PEPSTGQHESRVGIRWSPPNMGSVK 416

Query: 113 INIDGS 96
           IN+D S
Sbjct: 417 INVDAS 422



 Score = 22.3 bits (46), Expect(2) = 2e-15
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDY 724
           D + W F   G ++VKS Y
Sbjct: 198 DRLIWPFEKKGKFSVKSGY 216


>ref|XP_008231382.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 634

 Score = 87.4 bits (215), Expect(2) = 4e-15
 Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
 Frame = -1

Query: 674 GTASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLC 495
           G  SGS  +S     K IW +  P K+  FIWR    FL+   NLR R+++   ++  LC
Sbjct: 296 GETSGSCSHSVV--WKSIWHVDAPPKLKAFIWRGCSNFLSVRHNLRWRQVSCPGEY-GLC 352

Query: 494 NSGVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALI----SSDCRNQHL 327
               +T  H+F +C F++ FW+  P L      +EG+ F   W  ++    SS+   + +
Sbjct: 353 GLQDETQAHLFFKCDFARAFWFASP-LQLDVNKLEGEDFISTWRYMMLIFKSSEHAAEAI 411

Query: 326 DLIAFGLWSIWLSRHEVIFKHCTPNPKTSSASCLAYYQAYGKSNNLPLHQTHYYTPSSSV 147
               FGLW IW +R+  +F+    +PK +    L   + Y  +      + H  T +SSV
Sbjct: 412 QWFVFGLWRIWKARNIAVFEGVKADPKKAVHLLLNQVKEYRAAKQAVQPRPHLAT-NSSV 470

Query: 146 AWIPPQAGRLKINIDGSWSDFIGSAG 69
              PP  G LK+N   +WS      G
Sbjct: 471 PQNPP--GFLKVNCYAAWSALTSRGG 494



 Score = 21.9 bits (45), Expect(2) = 4e-15
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 774 IYWYFTGSGNYNVKSDYRV 718
           + W+F+  G Y V+S Y +
Sbjct: 262 LIWHFSTHGRYIVRSGYEL 280


>ref|XP_008339024.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 423

 Score = 84.3 bits (207), Expect(2) = 4e-15
 Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
 Frame = -1

Query: 629 KYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNSGVDTCFHIFSECQ 450
           K IW L TP KI +F+WR   G +AT  NL  R+ +S S  C +C +  ++  H+  +C 
Sbjct: 82  KIIWKLETPPKIRNFLWRTMHGAIATMANLYQRR-SSPSPLCPICKAYDESVEHMLLKCP 140

Query: 449 FSKQFWYLFPCLDGLWMVIEGKHFKLVWGALI---------SSDCRNQHLDLIAFGLWSI 297
           + +  W+      G+  +   +     W   +           + R   L  IAF  W I
Sbjct: 141 WVEGIWF-----GGMLSIRAHRQQASNWANWLLLMMESANGLREVRIMLLSYIAFTCWHI 195

Query: 296 WLSRHEVIFKHCTPNPK----TSSASCLAYYQAYGKSNNLPLHQT---HYYTPSS----- 153
           W +R E +F +   NP+      S S   Y  +   +    +H +   +   PS      
Sbjct: 196 WKARCEFLFNNLNLNPRRVLDAISLSVSVYKDSIPTTGTNLVHSSRNGNGTLPSPRIGEV 255

Query: 152 SVAWIPPQAGRLKINIDGSW--SDFIGSAGRICRNS 51
            V W PP  G +KIN+D SW  S  IG  G + RNS
Sbjct: 256 EVRWAPPNPGTIKINVDASWVASSGIGYTGVVARNS 291



 Score = 25.0 bits (53), Expect(2) = 4e-15
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDY---------RVRQMAL*RTDPLQVWRHSLWKL 655
           D + W +   G+Y+VKS Y         R+   +L    P  +W+  +WKL
Sbjct: 38  DRLIWPYERRGSYSVKSGYYWCLTRSRGRIPPPSLATNCPKTLWK-IIWKL 87


>ref|XP_010026656.1| PREDICTED: uncharacterized protein LOC104417027 [Eucalyptus grandis]
          Length = 1695

 Score = 86.7 bits (213), Expect(2) = 5e-15
 Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 10/226 (4%)
 Frame = -1

Query: 707  HYEGLIPSKFGGTASGSSCNSNANPL--KYIWSLYTPGKINHFIWRLYKGFLATSENLRT 534
            +Y+ L  S+   + +G+S +++ + L  K IW++ T  K+  F+W ++   LAT +NL  
Sbjct: 1338 NYQSLHFSEVPRSVNGASSSNSQDSLIWKRIWTMSTEPKVRMFLWSVFHNALATKDNLFR 1397

Query: 533  RKLTSSSQHCHLCNSGV-DTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGAL 357
            R +T S   C LCN    +T  HIF  C ++K+ W   P L  L  +    H    W   
Sbjct: 1398 RHIT-SDPICDLCNQQTPETIEHIFFSCSWTKEIW-KHPDLIAL-NIQTTVHSIAGW--- 1451

Query: 356  ISSDCRNQH----LDLIAFGLWSIWLSRHEVIFKHCTPNPKTSSASCLAYYQAYGKSN-- 195
            I++  R +     L  IA+ LW IW  R+  +F+H  P          A   +Y + N  
Sbjct: 1452 IATQVRQKSSVPGLAFIAYVLWQIWRGRNSFVFRHKQPKSHFVVPDARAQLNSYDRINPR 1511

Query: 194  -NLPLHQTHYYTPSSSVAWIPPQAGRLKINIDGSWSDFIGSAGRIC 60
               P     Y    S   W PP  G +K NIDG++          C
Sbjct: 1512 RKKPQSNALY----SEFLWRPPDRGAIKCNIDGAYQQGCNKGSMAC 1553



 Score = 22.3 bits (46), Expect(2) = 5e-15
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 780  DSIYWYFTGSGNYNVKSDYR 721
            D + W  +  G Y+VKS+Y+
Sbjct: 1321 DQLIWAASKDGIYSVKSNYQ 1340


>ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 883

 Score = 82.0 bits (201), Expect(2) = 5e-15
 Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
 Frame = -1

Query: 674  GTASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLC 495
            G  + S    N    K IW L  P KI  F+W+     LA   NL+ R++   +  C +C
Sbjct: 533  GRGASSMLRKNNLTWKRIWKLQVPNKIKFFLWKCCNKALAVRHNLQRRQIRVEN-ICGVC 591

Query: 494  NSGVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISS----DCRNQHL 327
            N+  ++  H+F +C FS +FW+  P L      + G  F   W  + +S    D   + L
Sbjct: 592  NTFDESENHLFFQCDFSHRFWFGSP-LHINSHELAGADFLENWDKICTSTKNMDKAEEIL 650

Query: 326  DLIAFGLWSIWLSRHEVIF---------------KHCTPNPKTSSASCLAYYQAYGKSNN 192
              +AFGLW +W +R++V+F               K+     +  S S     Q    SNN
Sbjct: 651  QEVAFGLWRLWKNRNDVVFNGVHRQHLEVMMLWRKNIYEFREALSLSLKCEDQLI--SNN 708

Query: 191  LPLHQTHYYTPSSSVAWIPPQAGRLKINIDGSW 93
            L   Q      S  + W  P+ G +K+N D +W
Sbjct: 709  LKTEQ------SPRLHWTKPKFGTIKVNTDAAW 735



 Score = 26.9 bits (58), Expect(2) = 5e-15
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDYRV 718
           D + W++T +G+Y+VK+ Y V
Sbjct: 499 DRLVWHYTVNGDYSVKTGYGV 519


>ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 806

 Score = 82.0 bits (201), Expect(2) = 5e-15
 Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
 Frame = -1

Query: 674  GTASGSSCNSNANPLKYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLC 495
            G  + S    N    K IW L  P KI  F+W+     LA   NL+ R++   +  C +C
Sbjct: 505  GRGASSMLRKNNLTWKRIWKLQVPNKIKFFLWKCCNKALAVRHNLQRRQIRVEN-ICGVC 563

Query: 494  NSGVDTCFHIFSECQFSKQFWYLFPCLDGLWMVIEGKHFKLVWGALISS----DCRNQHL 327
            N+  ++  H+F +C FS +FW+  P L      + G  F   W  + +S    D   + L
Sbjct: 564  NTFDESENHLFFQCDFSHRFWFGSP-LHINSHELAGADFLENWDKICTSTKNMDKAEEIL 622

Query: 326  DLIAFGLWSIWLSRHEVIF---------------KHCTPNPKTSSASCLAYYQAYGKSNN 192
              +AFGLW +W +R++V+F               K+     +  S S     Q    SNN
Sbjct: 623  QEVAFGLWRLWKNRNDVVFNGVHRQHLEVMMLWRKNIYEFREALSLSLKCEDQLI--SNN 680

Query: 191  LPLHQTHYYTPSSSVAWIPPQAGRLKINIDGSW 93
            L   Q      S  + W  P+ G +K+N D +W
Sbjct: 681  LKTEQ------SPRLHWTKPKFGTIKVNTDAAW 707



 Score = 26.9 bits (58), Expect(2) = 5e-15
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDYRV 718
           D + W++T +G+Y+VK+ Y V
Sbjct: 471 DRLVWHYTVNGDYSVKTGYGV 491


>ref|XP_009146521.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 642

 Score = 82.8 bits (203), Expect(2) = 6e-15
 Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
 Frame = -1

Query: 629 KYIWSLYTPGKINHFIWRLYKGFLATSENLRTRKLTSSSQHCHLCNSGVDTCFHIFSECQ 450
           K IW L T  KI HF+WR   G LA +E L++R L   +  C  C    ++  H+   C 
Sbjct: 315 KSIWKLKTSPKIRHFLWRALSGALAVAERLQSRGLYGDTT-CQACGQAPESICHVLFTCP 373

Query: 449 FSKQFWYLF-----PCLDGLWMVIEGKHFKLVWGALISSDCRNQHLDLIAFG--LWSIWL 291
            + + W L      P       V    HF +      S   ++ H ++ AF   LWS+W 
Sbjct: 374 TAVEAWRLAGIQPPPAGFSQTSVFLNLHFLVA----ASKKQQSDHSNVKAFPWILWSLWK 429

Query: 290 SRHEVIFKHCTPNPKTSSASCL----AYYQAYGKSNNLPLHQTHYYTPSSSVAWIPPQAG 123
            R+ +IF+     P+++ A  L     +YQ     N+ P H T     +S  AW  P A 
Sbjct: 430 GRNALIFERTRITPQSTIAKALEETEIWYQLL--CNDHPPHSTTASIGASLGAWEKPPAD 487

Query: 122 RLKINIDGSWS--DFIGSAGRICRNSVASSLRHS 27
            +K NI  +W   D I  +  I R+    +L HS
Sbjct: 488 VVKCNIGMAWEAPDHISGSSWIVRDCQGQALHHS 521



 Score = 25.8 bits (55), Expect(2) = 6e-15
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
 Frame = -3

Query: 780 DSIYWYFTGSGNYNVKSDYRVRQMAL*RTDP---------LQVWRHSLWKL 655
           DS  W FT  G Y  +S Y++  +      P          Q+W+ S+WKL
Sbjct: 271 DSDVWGFTKHGTYTTQSAYKMISVLHETNSPGHRPLPPVEKQLWK-SIWKL 320