BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00033880
         (1182 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]   543   e-151
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   517   e-144
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   503   e-139
gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposo...   474   e-131
emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]   462   e-127
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]   462   e-127
gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Ar...   461   e-127
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]              460   e-127
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...   459   e-126
ref|XP_010541762.1| PREDICTED: retrovirus-related Pol polyprotei...   452   e-124
ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868...   451   e-124
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...   451   e-124
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   448   e-123
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]                    448   e-123
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]                    448   e-123
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]                    448   e-123
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                    448   e-123
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|...   448   e-123
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops...   448   e-123
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                      447   e-122

>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score =  543 bits (1398), Expect = e-151
 Identities = 271/391 (69%), Positives = 302/391 (77%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSD-IEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCKW 179
            K +L A L    +EPT VTQA+KD KWR+AMS EFDAL+RNGTW+LVP    QN+ GCKW
Sbjct: 604  KXNLTAXLQQPTLEPTTVTQALKDPKWRQAMSAEFDALLRNGTWDLVPSHPXQNLXGCKW 663

Query: 180  IFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLR 359
            IFR K LP+G+IDRYKARLVAKGFHQ PG  Y ETFSPV+KPTTVRLVLSLAV +GW LR
Sbjct: 664  IFRTKYLPNGSIDRYKARLVAKGFHQXPGXXYSETFSPVIKPTTVRLVLSLAVXQGWSLR 723

Query: 360  QLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLL 539
            QLD NN FLQGTLTE+ FM+QP GF+D DHP HVCKLRKAIYGLKQAPRAWY+ELRQFLL
Sbjct: 724  QLDXNNXFLQGTLTEDXFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWYHELRQFLL 783

Query: 540  ASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGT 719
              GF NSI DTSLFI ++ G               GNN  + Q FI  L++RFSLKDLG 
Sbjct: 784  QFGFINSIVDTSLFIFNNHGTILYLLVHVDDIIITGNNVEAAQTFIQQLSQRFSLKDLGP 843

Query: 720  LQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDP 899
            L YFLGVEV     GL LSQ KYI DLL RT MT+A+P             QSGT L++P
Sbjct: 844  LTYFLGVEVTSHTNGLFLSQHKYIADLLNRTHMTEAKPAPTPLATSPILTLQSGTPLSNP 903

Query: 900  TEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLH 1079
            TE+RT+VGSLQYLSLTRPDIAY VNKLSQ+MH+PTSDHWNAVKRLLRYLCGTLD GI L 
Sbjct: 904  TEYRTMVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHGITLR 963

Query: 1080 HQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
              SPLALH +SD+DWAGNKDDFTSTSAYI+Y
Sbjct: 964  RTSPLALHVFSDSDWAGNKDDFTSTSAYIIY 994


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  517 bits (1332), Expect = e-144
 Identities = 261/399 (65%), Positives = 302/399 (75%), Gaps = 9/399 (2%)
 Frame = +3

Query: 3    KLSLLAQLTS--DIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCK 176
            KL+L  QL+   D+EPT  TQA+KD KWRKAMSEE+DALVRNGTWELVP    QN+VGCK
Sbjct: 641  KLNLHIQLSKPLDLEPTTPTQALKDPKWRKAMSEEYDALVRNGTWELVPSNPSQNVVGCK 700

Query: 177  WIFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDL 356
            WIFR KR  DG+IDR+KARLVAKGFHQRP +DY++TFSPVVKPTT+ LVLS+AVS GW L
Sbjct: 701  WIFRTKRNSDGSIDRFKARLVAKGFHQRPDIDYYDTFSPVVKPTTIMLVLSVAVSNGWIL 760

Query: 357  RQLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFL 536
            RQLDVNN FLQGTLTE+V+MTQP GF+D D P HVCKL+KAIYGLKQAPRAWY ELR FL
Sbjct: 761  RQLDVNNVFLQGTLTEHVYMTQPPGFIDQDSPSHVCKLKKAIYGLKQAPRAWYQELRSFL 820

Query: 537  LASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLG 716
            L  GF+NS ADTSLF+L  +G               G++   V  +I +LA RFSLKDLG
Sbjct: 821  LQFGFTNSHADTSLFVLKFRGHLVYFLVYVDDLIITGDDEHLVNRYIHLLANRFSLKDLG 880

Query: 717  TLQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTD 896
             L YFLGVE+VP  QG LLSQR+Y++DLLART M++A+P+             SG  L+D
Sbjct: 881  KLSYFLGVEIVPNSQGFLLSQRRYLLDLLARTHMSEAKPVQTPLPSGTKISLHSGDKLSD 940

Query: 897  PTEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILL 1076
            PTEFR VVGSLQYL LTR DIA+  NKLSQ+MH PT++HW  VKRLLRYLCGT D  + L
Sbjct: 941  PTEFRAVVGSLQYLLLTRLDIAFAANKLSQFMHTPTTEHWTLVKRLLRYLCGTPDHSLQL 1000

Query: 1077 HHQSPL-------ALHAYSDADWAGNKDDFTSTSAYIVY 1172
            +  SPL       ALHAYSDADWAG+ DDF+ST AYIVY
Sbjct: 1001 YCDSPLSLHAFSDALHAYSDADWAGDPDDFSSTGAYIVY 1039


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  503 bits (1295), Expect = e-139
 Identities = 250/385 (64%), Positives = 293/385 (76%), Gaps = 8/385 (2%)
 Frame = +3

Query: 42   PTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCKWIFRIKRLPDGTIDR 221
            PT ++QA+KD  WR+AMS+E+DALVRNGTWELVPP  + N+VGCKWIFRIKR  DG+IDR
Sbjct: 846  PTSISQALKDQNWRQAMSDEYDALVRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDR 905

Query: 222  YKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLRQLDVNNAFLQGTLT 401
            YKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLS+AVS GW LRQLDVNNAFLQG L+
Sbjct: 906  YKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSIAVSNGWSLRQLDVNNAFLQGRLS 965

Query: 402  ENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLLASGFSNSIADTSLF 581
            ENVFM QP GFVD DHP +VCKL KAIYGLKQAPRAWY+ELRQFLL SGF NS +DTSLF
Sbjct: 966  ENVFMAQPPGFVDSDHPSYVCKLHKAIYGLKQAPRAWYHELRQFLLTSGFKNSHSDTSLF 1025

Query: 582  ILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGTLQYFLGVEVVPRPQ 761
            +L                   G++ T V +F+  LA+ FSLKDL          VVP   
Sbjct: 1026 VLRSSNHVVYLLVYVDDIILTGSSDTLVSQFVDYLAQXFSLKDL----------VVPHRL 1075

Query: 762  GLLLSQRKYIVDLLARTKMTDARPI-XXXXXXXXXXXXQSGTALTDPTEFRTVVGSLQYL 938
            G+LLSQR+YI DLL RT M DA+P+              SGT L+DPT +R  VGSLQYL
Sbjct: 1076 GILLSQRRYIQDLLIRTNMADAKPVLTPLPTSSTAISLTSGTPLSDPTPYRAAVGSLQYL 1135

Query: 939  SLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLHHQSPL-------A 1097
            SLTRPDI++ VN+++Q+MH+PTS+HW  VKR+LRYLCGTLDKG+LL+  S +       +
Sbjct: 1136 SLTRPDISFAVNRMAQFMHQPTSEHWVLVKRILRYLCGTLDKGLLLYRDSSIPLHGFSDS 1195

Query: 1098 LHAYSDADWAGNKDDFTSTSAYIVY 1172
            LHA+SDADWAGNKDD++STSAY+VY
Sbjct: 1196 LHAFSDADWAGNKDDYSSTSAYLVY 1220


>gb|KHN17953.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine
            soja]
          Length = 1294

 Score =  474 bits (1219), Expect = e-131
 Identities = 230/390 (58%), Positives = 281/390 (72%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCKWI 182
            KL+L  Q +S IEP  +TQA++D  WR AM  EFDAL  N TW+LV  +  QN+VGCKW+
Sbjct: 763  KLNLHVQASSPIEPNTITQALRDPDWRSAMQAEFDALHHNNTWDLVSRSSDQNLVGCKWV 822

Query: 183  FRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLRQ 362
            FRIKR PDG+IDRYKARLVAKGFHQR G DY ETFSPVVKP T+R+VL+LAV +GW +RQ
Sbjct: 823  FRIKRNPDGSIDRYKARLVAKGFHQRSGWDYTETFSPVVKPVTIRIVLTLAVRQGWPIRQ 882

Query: 363  LDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLLA 542
            LDVNNAFLQGTL E VFM QP GFV+ + P HVC+L+KA+YGLKQAPRAWY ELR FL +
Sbjct: 883  LDVNNAFLQGTLKEEVFMIQPPGFVNKNFPDHVCRLKKALYGLKQAPRAWYTELRIFLFS 942

Query: 543  SGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGTL 722
             GF NS AD SLFI     +              GN++  + + I  LA RFSLKDLG L
Sbjct: 943  LGFVNSTADASLFIYQKPEVTLYLLVYVDDIIMTGNSSAELSKLIATLAARFSLKDLGCL 1002

Query: 723  QYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDPT 902
             YFLGVEV+P   G+ LSQRKYI+DLL ++ MT+ +P              SG  L  P 
Sbjct: 1003 SYFLGVEVIPSAAGMFLSQRKYIIDLLHKSGMTNTKPASTPLSASVQLLKDSGDLLPSPN 1062

Query: 903  EFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLHH 1082
            E+RT+VGSLQYLSLTRPDIA+  NKL+Q+M  P + HW+A+KR+LRYL G+ DKG+ +  
Sbjct: 1063 EYRTLVGSLQYLSLTRPDIAFSTNKLAQFMQNPRTAHWSALKRVLRYLAGSCDKGVFISA 1122

Query: 1083 QSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
             +PL  HAYSDADWAG+KDD+ ST+ Y++Y
Sbjct: 1123 TAPLTFHAYSDADWAGDKDDYVSTTGYLLY 1152


>emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]
          Length = 619

 Score =  462 bits (1190), Expect = e-127
 Identities = 236/385 (61%), Positives = 281/385 (72%), Gaps = 10/385 (2%)
 Frame = +3

Query: 3    KLSLLAQLTS--DIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCK 176
            KL+L   L S    EPT V QA+KD+ W KAMSEE+DALVRNGTWELV PTG+ N+VGCK
Sbjct: 125  KLNLHTHLASFPSSEPTSVAQALKDSNWCKAMSEEYDALVRNGTWELVSPTGITNLVGCK 184

Query: 177  WIFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDL 356
            W+FRIKR  DG+IDR+KA LVAKGFHQRPGVDY ETFSPV+KPTT+ LVLS+AVS GW L
Sbjct: 185  WVFRIKRNSDGSIDRFKACLVAKGFHQRPGVDYLETFSPVIKPTTMILVLSIAVSNGWSL 244

Query: 357  RQLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFL 536
            RQLDVNNAFLQGT++E V+M QP GF+D D P HVCKL KAIYGLKQAPR WY+EL QFL
Sbjct: 245  RQLDVNNAFLQGTISETVYMAQPPGFIDADKPTHVCKLHKAIYGLKQAPRTWYHELCQFL 304

Query: 537  LASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLG 716
            +  GF NS +DTSLF+LH                  GN+   V + +  LA+RFSLKDLG
Sbjct: 305  VDFGFKNSHSDTSLFVLHAGTNLLYLLVYVDDIIITGNSDDLVSQVVECLAQRFSLKDLG 364

Query: 717  TLQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPI-XXXXXXXXXXXXQSGTALT 893
             L YFLGVEVV    GLLLSQR+YI DLL RT M   +PI              SG+ L+
Sbjct: 365  PLSYFLGVEVVHHRHGLLLSQRRYIKDLLTRTNMQAIKPIHTPLPTSSSFIKLSSGSPLS 424

Query: 894  DPTEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGIL 1073
            DPT++RTVVG+LQ++SLTR DI++ VNK+SQ+MH+PT +HW  VKR+L YL GT++ G+L
Sbjct: 425  DPTKYRTVVGNLQFVSLTRSDISFAVNKMSQFMHQPTDEHWTLVKRILCYLSGTINDGLL 484

Query: 1074 LHHQSPLAL-------HAYSDADWA 1127
            LH   PL+L       HA+SDADWA
Sbjct: 485  LHRTLPLSLHAFSDSIHAFSDADWA 509


>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score =  462 bits (1188), Expect = e-127
 Identities = 231/317 (72%), Positives = 252/317 (79%)
 Frame = +3

Query: 222  YKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLRQLDVNNAFLQGTLT 401
            YKARLVAKGFHQRPG+DY ETFSPV+KPTTVRLVLSLAVS+GW LRQLDVNNAFLQGTLT
Sbjct: 18   YKARLVAKGFHQRPGIDYSETFSPVIKPTTVRLVLSLAVSQGWSLRQLDVNNAFLQGTLT 77

Query: 402  ENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLLASGFSNSIADTSLF 581
            E+VFM+QP GF+D DHP HVCKLRKAIYGLKQAPRAWY+EL QFLL  GF NSIADTSLF
Sbjct: 78   EDVFMSQPPGFIDRDHPHHVCKLRKAIYGLKQAPRAWYHELCQFLLQFGFINSIADTSLF 137

Query: 582  ILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGTLQYFLGVEVVPRPQ 761
            I ++                 GNN  + Q FI  L++RFSLKDLG L YFLGVEV     
Sbjct: 138  IFNNHDTILYLLVYVDDIIITGNNVEAAQTFIQQLSQRFSLKDLGPLTYFLGVEVTSHTN 197

Query: 762  GLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDPTEFRTVVGSLQYLS 941
            GL LSQRKYI DLL RT MT+A+P             QSGT L+DPTE+RTVVGSLQYLS
Sbjct: 198  GLFLSQRKYIADLLNRTHMTEAKPAPTPLATSPILTLQSGTPLSDPTEYRTVVGSLQYLS 257

Query: 942  LTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLHHQSPLALHAYSDAD 1121
            LTRPDIAY VNKLSQ+MH+PTSDHWNAVKRLLRYLCGTLD  I L   SPLALHA+SD+D
Sbjct: 258  LTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRTSPLALHAFSDSD 317

Query: 1122 WAGNKDDFTSTSAYIVY 1172
            WAGNKDDFTSTSAYI+Y
Sbjct: 318  WAGNKDDFTSTSAYIIY 334


>gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Arabis alpina]
          Length = 2090

 Score =  461 bits (1186), Expect = e-127
 Identities = 232/393 (59%), Positives = 283/393 (72%), Gaps = 3/393 (0%)
 Frame = +3

Query: 3    KLSLLAQLTS--DIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGC 173
            KL+L+A +TS  DIEP   +QA+KD +WRKAM  E++A + N +W+LVPP   Q   VGC
Sbjct: 973  KLNLIAAITSPSDIEPRTASQALKDERWRKAMGLEYNAQLDNHSWDLVPPPPPQVTRVGC 1032

Query: 174  KWIFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWD 353
            KWIF  K   DG+++R+KARLVA+G++QRPG+DY ETFSPV+K TT+RLVL +AV R W 
Sbjct: 1033 KWIFTKKYNSDGSLNRHKARLVAQGYNQRPGIDYAETFSPVIKSTTIRLVLGVAVGRSWP 1092

Query: 354  LRQLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQF 533
            ++QLDVNNAFLQGTLT+ V+M QP GF+D D P HVC+LRKAIYGLKQAPRAWY ELR +
Sbjct: 1093 IKQLDVNNAFLQGTLTDEVYMNQPPGFIDRDKPDHVCRLRKAIYGLKQAPRAWYIELRNY 1152

Query: 534  LLASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDL 713
            L++ GF NS++DTSLFIL                   GN+   +Q  +  LA RFS+KD 
Sbjct: 1153 LISVGFVNSVSDTSLFILQQGKSIVYMLIYVDDILVTGNDNNLLQHTLDALASRFSVKDP 1212

Query: 714  GTLQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALT 893
              L YFLG+E     QGL LSQRKYI DLLART M  A+P+             SGT L+
Sbjct: 1213 EDLHYFLGIEARRSSQGLHLSQRKYINDLLARTNMLLAKPVLTPMATSPKLSLYSGTHLS 1272

Query: 894  DPTEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGIL 1073
            DPTE+R ++GSLQYLS TRPD+ Y VNKLSQYMH PTSDHW+A+KRLLRYL GT D GI 
Sbjct: 1273 DPTEYRAILGSLQYLSFTRPDLCYAVNKLSQYMHSPTSDHWSALKRLLRYLAGTTDHGIF 1332

Query: 1074 LHHQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
            L   + L LHAYSDADWAG+KDD+ ST+ YIVY
Sbjct: 1333 LQKGTTLTLHAYSDADWAGDKDDYVSTNGYIVY 1365



 Score = 69.7 bits (169), Expect = 5e-09
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +3

Query: 3    KLSLLAQLTS--DIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGC 173
            KL+L+A +TS  DIEP   +QA+KD +WRKAM  E++A + N +W+LVPP   Q   VGC
Sbjct: 2026 KLNLIAAITSPSDIEPRTASQALKDERWRKAMGLEYNAQLDNHSWDLVPPPPPQVTRVGC 2085

Query: 174  KWIF 185
            KWIF
Sbjct: 2086 KWIF 2089


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score =  460 bits (1184), Expect = e-127
 Identities = 230/392 (58%), Positives = 280/392 (71%), Gaps = 2/392 (0%)
 Frame = +3

Query: 3    KLSLLAQL--TSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCK 176
            KLSLLA+   T    P  V QA++D KWR AM EE +A +RN T+ELVPP   QN++  K
Sbjct: 1010 KLSLLAKTVQTRPQIPNTVNQALRDEKWRNAMGEEINAQIRNNTFELVPPKPNQNVISTK 1069

Query: 177  WIFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDL 356
            WIF +K LP+GT+DRYKARLVA+GF Q+ G+ Y ETFSPVVK  T+RLVL LAVSR W +
Sbjct: 1070 WIFTLKYLPNGTLDRYKARLVARGFRQQYGLHYSETFSPVVKSLTIRLVLQLAVSRSWTI 1129

Query: 357  RQLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFL 536
            +QLDVNNAFLQGTLT+ V++TQP GF+D D P HVC+L+KA+YGLKQAPRAWY ELR F+
Sbjct: 1130 KQLDVNNAFLQGTLTDEVYVTQPPGFIDPDRPHHVCRLKKALYGLKQAPRAWYQELRNFV 1189

Query: 537  LASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLG 716
             + GF+NS+ADTS+F+  +                 G++   V  FIT L+RRFSLKD  
Sbjct: 1190 CSLGFTNSLADTSVFVYINDIQIVYCLVYVDDIIVTGSSDALVMAFITALSRRFSLKDPT 1249

Query: 717  TLQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTD 896
             L YFLG+E     QGL L Q KY+ DLL+R KM DA+P+             SG AL +
Sbjct: 1250 DLVYFLGIEATRTSQGLHLMQHKYVYDLLSRMKMLDAKPVSTPMATHPKLSLYSGIALDE 1309

Query: 897  PTEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILL 1076
            P E+RTV+GSLQYL+ TRPDIAY VN+LSQ+MHRPT  HW A KR+LRYL GT   GILL
Sbjct: 1310 PGEYRTVIGSLQYLAFTRPDIAYAVNRLSQFMHRPTDIHWQAAKRVLRYLAGTATHGILL 1369

Query: 1077 HHQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
               SPL+LHA+SDADWAG+ DDF ST+AYIVY
Sbjct: 1370 RSNSPLSLHAFSDADWAGDNDDFVSTNAYIVY 1401


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
            gi|225898008|dbj|BAH30336.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 1459

 Score =  459 bits (1181), Expect = e-126
 Identities = 228/392 (58%), Positives = 278/392 (70%), Gaps = 2/392 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSD--IEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCK 176
            K SL   LT     EP  VTQA+KD KWR AMS+EFDA  RN TW+LVPP   Q++VGC+
Sbjct: 935  KTSLTVALTQPHLSEPNTVTQALKDKKWRFAMSDEFDAQQRNHTWDLVPPNPTQHLVGCR 994

Query: 177  WIFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDL 356
            W+F++K LP+G ID+YKARLVAKGF+Q+ GVDY ETFSPV+K TT+R+VL +AV + W L
Sbjct: 995  WVFKLKYLPNGLIDKYKARLVAKGFNQQYGVDYAETFSPVIKATTIRVVLDVAVKKNWPL 1054

Query: 357  RQLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFL 536
            +QLDVNNAFLQGTLTE V+M QP GFVD D P HVC+LRKAIYGLKQAPRAWY EL+Q L
Sbjct: 1055 KQLDVNNAFLQGTLTEEVYMAQPPGFVDKDRPSHVCRLRKAIYGLKQAPRAWYMELKQHL 1114

Query: 537  LASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLG 716
            L  GF NS+ADTSLFI                    G++  SV   ++ LA RFS+KD  
Sbjct: 1115 LNIGFVNSLADTSLFIYSHGTTLLYLLVYVDDIIVTGSDHKSVSAVLSSLAERFSIKDPT 1174

Query: 717  TLQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTD 896
             L YFLG+E      GL L QRKY+ DLLA+  M DA+P+              GT L D
Sbjct: 1175 DLHYFLGIEATRTNTGLHLMQRKYMTDLLAKHNMLDAKPVATPLPTSPKLTLHGGTKLND 1234

Query: 897  PTEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILL 1076
             +E+R+VVGSLQYL+ TRPDIA+ VN+LSQ+MH+PTSDHW A KR+LRYL GT   GI L
Sbjct: 1235 ASEYRSVVGSLQYLAFTRPDIAFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHGIFL 1294

Query: 1077 HHQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
            +  SP+ LHA+SDADWAG+  D+ ST+AY++Y
Sbjct: 1295 NSSSPIHLHAFSDADWAGDSADYVSTNAYVIY 1326


>ref|XP_010541762.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Tarenaya hassleriana]
          Length = 813

 Score =  452 bits (1163), Expect = e-124
 Identities = 227/361 (62%), Positives = 269/361 (74%)
 Frame = +3

Query: 90   MSEEFDALVRNGTWELVPPTGVQNIVGCKWIFRIKRLPDGTIDRYKARLVAKGFHQRPGV 269
            MSEEF+AL+RN TW LVPP    N+VGCKW+FR KRL DG+IDRYKARLVAKGFHQRPGV
Sbjct: 1    MSEEFNALLRNDTWSLVPPDFASNVVGCKWVFRTKRLSDGSIDRYKARLVAKGFHQRPGV 60

Query: 270  DYHETFSPVVKPTTVRLVLSLAVSRGWDLRQLDVNNAFLQGTLTENVFMTQPQGFVDVDH 449
            DY ETFSPVVK  TVR++LS+AVSR W LRQLDVNNAFLQG+L E+V++ QP GF+D D 
Sbjct: 61   DYTETFSPVVKHATVRVILSIAVSRNWSLRQLDVNNAFLQGSLHEDVYVAQPAGFIDKDR 120

Query: 450  PQHVCKLRKAIYGLKQAPRAWYNELRQFLLASGFSNSIADTSLFILHDKGLXXXXXXXXX 629
            P H+CKL KAIYGLKQAPRAWYNEL QFL+ SGF NS++D+SLFI H +           
Sbjct: 121  PSHICKLHKAIYGLKQAPRAWYNELCQFLVQSGFINSLSDSSLFI-HKQ----------- 168

Query: 630  XXXXXGNNATSVQEFITVLARRFSLKDLGTLQYFLGVEVVPRPQGLLLSQRKYIVDLLAR 809
                  N+      FI++LA RFSLKDLG L +FLGVEV     GL LSQR+YI D+L R
Sbjct: 169  ------NSDLIYLLFISLLAGRFSLKDLGNLSFFLGVEVKRSSAGLALSQRRYIDDILTR 222

Query: 810  TKMTDARPIXXXXXXXXXXXXQSGTALTDPTEFRTVVGSLQYLSLTRPDIAYVVNKLSQY 989
             KM+DA+P+             SG+ L DPTEFR V+GSLQYL LTRPD+A+ VNKLSQY
Sbjct: 223  HKMSDAKPMPTPLSSTSSLSLNSGSVLEDPTEFRQVLGSLQYLLLTRPDLAFAVNKLSQY 282

Query: 990  MHRPTSDHWNAVKRLLRYLCGTLDKGILLHHQSPLALHAYSDADWAGNKDDFTSTSAYIV 1169
            MHRPT+DHW AVKR+LRY+ GT   G+     +  +LHAYSDADW G++DDF+ST A+IV
Sbjct: 283  MHRPTTDHWQAVKRILRYVGGTRPLGLFFAASNTASLHAYSDADWGGDRDDFSSTGAHIV 342

Query: 1170 Y 1172
            Y
Sbjct: 343  Y 343


>ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868780 [Brassica rapa]
          Length = 2690

 Score =  451 bits (1160), Expect = e-124
 Identities = 223/390 (57%), Positives = 280/390 (71%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCKWI 182
            K SL  Q T  I PT V QA++D KWR +MS EFDA+ RN T++LVPP   QN++  KWI
Sbjct: 1589 KFSLNIQ-TRPIIPTTVNQALRDRKWRNSMSLEFDAITRNHTYDLVPPAPYQNVIDTKWI 1647

Query: 183  FRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLRQ 362
            F +K LP+G IDR+K+R+VA+GF+QR G+DY ETFSPV+K TTVRLVL  AV + W +RQ
Sbjct: 1648 FTLKYLPNGEIDRHKSRIVARGFNQRYGIDYAETFSPVIKSTTVRLVLEHAVRKDWTIRQ 1707

Query: 363  LDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLLA 542
            +DVNNAFLQGTL + V+++QP GFVD D P HVC+LRKA+YGLKQAPRAWY EL++ LLA
Sbjct: 1708 IDVNNAFLQGTLQDEVYVSQPPGFVDKDRPHHVCRLRKALYGLKQAPRAWYEELKRTLLA 1767

Query: 543  SGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGTL 722
            +GF NS+ADTSLF                     G++   V +FI +LA+RFS+KDLG +
Sbjct: 1768 AGFRNSVADTSLFTYCHGPHLVYILVYVDDIVVTGSSIPLVNQFIAMLAQRFSIKDLGHI 1827

Query: 723  QYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDPT 902
             YFLG+E     +GL L Q KYI DLLA+T M +A+ +            +SGT L +PT
Sbjct: 1828 SYFLGIEATRTSKGLHLMQNKYIQDLLAKTNMLNAKTVSTPLATHPKLTLRSGTPLLNPT 1887

Query: 903  EFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLHH 1082
            ++R VVGSLQYL+ TRPDIAY VNKLSQ+MH+PT DHW A KR+LRYL GT  +GI +  
Sbjct: 1888 DYRQVVGSLQYLAFTRPDIAYAVNKLSQFMHQPTEDHWQAAKRVLRYLAGTSKQGIWIRR 1947

Query: 1083 QSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
             SP  LHAYSDADWAG+ DD+ ST+AYI+Y
Sbjct: 1948 DSPPTLHAYSDADWAGDPDDYISTNAYIIY 1977


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
            gi|7268438|emb|CAB80958.1| retrotransposon like protein
            [Arabidopsis thaliana]
          Length = 1474

 Score =  451 bits (1160), Expect = e-124
 Identities = 229/392 (58%), Positives = 276/392 (70%), Gaps = 2/392 (0%)
 Frame = +3

Query: 3    KLSLLAQLT--SDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCK 176
            K SL A L   S  EPT VTQA+KD KWR AMS+EFDA  RN TW+LVP    Q +VGCK
Sbjct: 951  KFSLTATLPNRSPSEPTNVTQALKDKKWRFAMSDEFDAQQRNHTWDLVPHES-QLLVGCK 1009

Query: 177  WIFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDL 356
            W+F++K LP+G ID+YKARLVAKGF+Q+ GVDY ETFSPV+K TT+RLVL +AV + W++
Sbjct: 1010 WVFKLKYLPNGAIDKYKARLVAKGFNQQYGVDYAETFSPVIKSTTIRLVLDVAVKKDWEI 1069

Query: 357  RQLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFL 536
            +QLDVNNAFLQGTLTE V+M QP GF+D D P HVC+LRKAIYGLKQAPRAWY EL+Q L
Sbjct: 1070 KQLDVNNAFLQGTLTEEVYMAQPPGFIDKDRPTHVCRLRKAIYGLKQAPRAWYMELKQHL 1129

Query: 537  LASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLG 716
               GF NS++D SLFI                    G++ +S+   +T LA RFS+KD  
Sbjct: 1130 FNIGFVNSLSDASLFIYCHGTTFVYVLVYVDDIIVTGSDKSSIDAVLTSLAERFSIKDPT 1189

Query: 717  TLQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTD 896
             L YFLG+E     QGL L QRKYI DLLA+  M DA+P+              GT L D
Sbjct: 1190 DLHYFLGIEATRTKQGLHLMQRKYIKDLLAKHNMADAKPVLTPLPTSPKLTLHGGTKLND 1249

Query: 897  PTEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILL 1076
             +E+R+VVGSLQYL+ TRPDIAY VN+LSQ M +PT DHW A KR+LRYL GT   GI L
Sbjct: 1250 ASEYRSVVGSLQYLAFTRPDIAYAVNRLSQLMPQPTEDHWQAAKRVLRYLAGTSTHGIFL 1309

Query: 1077 HHQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
               SPL LHA+SDADWAG+ DD+ ST+AY++Y
Sbjct: 1310 DTTSPLNLHAFSDADWAGDSDDYVSTNAYVIY 1341


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/391 (56%), Positives = 277/391 (70%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGCKW 179
            K S    L ++ EP    QA+KD++WR+AM  E +A + N TW+LVPP      IVGC+W
Sbjct: 800  KYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRW 859

Query: 180  IFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLR 359
            IF  K   DG+++RYKARLVAKG++QRPG+DY ETFSPV+K T++R+VL +AV R W +R
Sbjct: 860  IFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIR 919

Query: 360  QLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLL 539
            QLDVNNAFLQGTLT+ V+M+QP GFVD D P +VC+LRKAIYGLKQAPRAWY ELR +LL
Sbjct: 920  QLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLL 979

Query: 540  ASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGT 719
              GF NSI+DTSLF+L                   GN+   ++  +  L++RFS+K+   
Sbjct: 980  TVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHED 1039

Query: 720  LQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDP 899
            L YFLG+E    PQGL LSQR+Y +DLLART M  A+P+             SGT L DP
Sbjct: 1040 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDP 1099

Query: 900  TEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLH 1079
            TE+R +VGSLQYL+ TRPD++Y VN+LSQYMH PT DHWNA+KR+LRYL GT D GI L 
Sbjct: 1100 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1159

Query: 1080 HQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
              + L+LHAYSDADWAG+ DD+ ST+ YIVY
Sbjct: 1160 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1190


>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/391 (56%), Positives = 277/391 (70%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGCKW 179
            K S    L ++ EP    QA+KD++WR+AM  E +A + N TW+LVPP      IVGC+W
Sbjct: 945  KYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRW 1004

Query: 180  IFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLR 359
            IF  K   DG+++RYKARLVAKG++QRPG+DY ETFSPV+K T++R+VL +AV R W +R
Sbjct: 1005 IFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIR 1064

Query: 360  QLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLL 539
            QLDVNNAFLQGTLT+ V+M+QP GFVD D P +VC+LRKAIYGLKQAPRAWY ELR +LL
Sbjct: 1065 QLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLL 1124

Query: 540  ASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGT 719
              GF NSI+DTSLF+L                   GN+   ++  +  L++RFS+K+   
Sbjct: 1125 TVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHED 1184

Query: 720  LQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDP 899
            L YFLG+E    PQGL LSQR+Y +DLLART M  A+P+             SGT L DP
Sbjct: 1185 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDP 1244

Query: 900  TEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLH 1079
            TE+R +VGSLQYL+ TRPD++Y VN+LSQYMH PT DHWNA+KR+LRYL GT D GI L 
Sbjct: 1245 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1304

Query: 1080 HQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
              + L+LHAYSDADWAG+ DD+ ST+ YIVY
Sbjct: 1305 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1335


>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/391 (56%), Positives = 277/391 (70%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGCKW 179
            K S    L ++ EP    QA+KD++WR+AM  E +A + N TW+LVPP      IVGC+W
Sbjct: 945  KYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRW 1004

Query: 180  IFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLR 359
            IF  K   DG+++RYKARLVAKG++QRPG+DY ETFSPV+K T++R+VL +AV R W +R
Sbjct: 1005 IFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIR 1064

Query: 360  QLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLL 539
            QLDVNNAFLQGTLT+ V+M+QP GFVD D P +VC+LRKAIYGLKQAPRAWY ELR +LL
Sbjct: 1065 QLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLL 1124

Query: 540  ASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGT 719
              GF NSI+DTSLF+L                   GN+   ++  +  L++RFS+K+   
Sbjct: 1125 TVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHED 1184

Query: 720  LQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDP 899
            L YFLG+E    PQGL LSQR+Y +DLLART M  A+P+             SGT L DP
Sbjct: 1185 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDP 1244

Query: 900  TEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLH 1079
            TE+R +VGSLQYL+ TRPD++Y VN+LSQYMH PT DHWNA+KR+LRYL GT D GI L 
Sbjct: 1245 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1304

Query: 1080 HQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
              + L+LHAYSDADWAG+ DD+ ST+ YIVY
Sbjct: 1305 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1335


>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/391 (56%), Positives = 277/391 (70%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGCKW 179
            K S    L ++ EP    QA+KD++WR+AM  E +A + N TW+LVPP      IVGC+W
Sbjct: 945  KYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRW 1004

Query: 180  IFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLR 359
            IF  K   DG+++RYKARLVAKG++QRPG+DY ETFSPV+K T++R+VL +AV R W +R
Sbjct: 1005 IFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIR 1064

Query: 360  QLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLL 539
            QLDVNNAFLQGTLT+ V+M+QP GFVD D P +VC+LRKAIYGLKQAPRAWY ELR +LL
Sbjct: 1065 QLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLL 1124

Query: 540  ASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGT 719
              GF NSI+DTSLF+L                   GN+   ++  +  L++RFS+K+   
Sbjct: 1125 TVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHED 1184

Query: 720  LQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDP 899
            L YFLG+E    PQGL LSQR+Y +DLLART M  A+P+             SGT L DP
Sbjct: 1185 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDP 1244

Query: 900  TEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLH 1079
            TE+R +VGSLQYL+ TRPD++Y VN+LSQYMH PT DHWNA+KR+LRYL GT D GI L 
Sbjct: 1245 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1304

Query: 1080 HQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
              + L+LHAYSDADWAG+ DD+ ST+ YIVY
Sbjct: 1305 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1335


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/391 (56%), Positives = 277/391 (70%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGCKW 179
            K S    L ++ EP    QA+KD++WR+AM  E +A + N TW+LVPP      IVGC+W
Sbjct: 945  KYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRW 1004

Query: 180  IFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLR 359
            IF  K   DG+++RYKARLVAKG++QRPG+DY ETFSPV+K T++R+VL +AV R W +R
Sbjct: 1005 IFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIR 1064

Query: 360  QLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLL 539
            QLDVNNAFLQGTLT+ V+M+QP GFVD D P +VC+LRKAIYGLKQAPRAWY ELR +LL
Sbjct: 1065 QLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLL 1124

Query: 540  ASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGT 719
              GF NSI+DTSLF+L                   GN+   ++  +  L++RFS+K+   
Sbjct: 1125 TVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHED 1184

Query: 720  LQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDP 899
            L YFLG+E    PQGL LSQR+Y +DLLART M  A+P+             SGT L DP
Sbjct: 1185 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDP 1244

Query: 900  TEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLH 1079
            TE+R +VGSLQYL+ TRPD++Y VN+LSQYMH PT DHWNA+KR+LRYL GT D GI L 
Sbjct: 1245 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1304

Query: 1080 HQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
              + L+LHAYSDADWAG+ DD+ ST+ YIVY
Sbjct: 1305 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1335


>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/391 (56%), Positives = 277/391 (70%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGCKW 179
            K S    L ++ EP    QA+KD++WR+AM  E +A + N TW+LVPP      IVGC+W
Sbjct: 945  KYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRW 1004

Query: 180  IFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLR 359
            IF  K   DG+++RYKARLVAKG++QRPG+DY ETFSPV+K T++R+VL +AV R W +R
Sbjct: 1005 IFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIR 1064

Query: 360  QLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLL 539
            QLDVNNAFLQGTLT+ V+M+QP GFVD D P +VC+LRKAIYGLKQAPRAWY ELR +LL
Sbjct: 1065 QLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLL 1124

Query: 540  ASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGT 719
              GF NSI+DTSLF+L                   GN+   ++  +  L++RFS+K+   
Sbjct: 1125 TVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHED 1184

Query: 720  LQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDP 899
            L YFLG+E    PQGL LSQR+Y +DLLART M  A+P+             SGT L DP
Sbjct: 1185 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDP 1244

Query: 900  TEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLH 1079
            TE+R +VGSLQYL+ TRPD++Y VN+LSQYMH PT DHWNA+KR+LRYL GT D GI L 
Sbjct: 1245 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1304

Query: 1080 HQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
              + L+LHAYSDADWAG+ DD+ ST+ YIVY
Sbjct: 1305 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1335


>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
            gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
            transposon [Arabidopsis thaliana]
          Length = 1456

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/391 (56%), Positives = 277/391 (70%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    KLSLLAQLTSDIEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQ-NIVGCKW 179
            K S    L ++ EP    QA+KD++WR+AM  E +A + N TW+LVPP      IVGC+W
Sbjct: 926  KYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRW 985

Query: 180  IFRIKRLPDGTIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLR 359
            IF  K   DG+++RYKARLVAKG++QRPG+DY ETFSPV+K T++R+VL +AV R W +R
Sbjct: 986  IFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIR 1045

Query: 360  QLDVNNAFLQGTLTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLL 539
            QLDVNNAFLQGTLT+ V+M+QP GFVD D P +VC+LRKAIYGLKQAPRAWY ELR +LL
Sbjct: 1046 QLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLL 1105

Query: 540  ASGFSNSIADTSLFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGT 719
              GF NSI+DTSLF+L                   GN+   ++  +  L++RFS+K+   
Sbjct: 1106 TVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHED 1165

Query: 720  LQYFLGVEVVPRPQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDP 899
            L YFLG+E    PQGL LSQR+Y +DLLART M  A+P+             SGT L DP
Sbjct: 1166 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDP 1225

Query: 900  TEFRTVVGSLQYLSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLH 1079
            TE+R +VGSLQYL+ TRPD++Y VN+LSQYMH PT DHWNA+KR+LRYL GT D GI L 
Sbjct: 1226 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1285

Query: 1080 HQSPLALHAYSDADWAGNKDDFTSTSAYIVY 1172
              + L+LHAYSDADWAG+ DD+ ST+ YIVY
Sbjct: 1286 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1316


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score =  447 bits (1149), Expect = e-122
 Identities = 216/379 (56%), Positives = 268/379 (70%)
 Frame = +3

Query: 36   IEPTCVTQAIKDNKWRKAMSEEFDALVRNGTWELVPPTGVQNIVGCKWIFRIKRLPDGTI 215
            I P  V +A+ D  WR+AM +E +A  RNGT++LVPP   QN++GCKW+F +K LP+G +
Sbjct: 936  IIPKTVAEALLDPNWRQAMCDEINAQTRNGTFDLVPPAPNQNVIGCKWVFTLKYLPNGVL 995

Query: 216  DRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSLAVSRGWDLRQLDVNNAFLQGT 395
            DRYKARLVAKGFHQ+ G D+ ETFSPV+K TTVR VL +AVS+GW +RQ+DVNNAFLQGT
Sbjct: 996  DRYKARLVAKGFHQQYGHDFKETFSPVIKSTTVRSVLHVAVSKGWSIRQIDVNNAFLQGT 1055

Query: 396  LTENVFMTQPQGFVDVDHPQHVCKLRKAIYGLKQAPRAWYNELRQFLLASGFSNSIADTS 575
            L++ V++ QP GFVD D+P HVC+L KA+YGLKQAPRAWY ELR +LL  GF NSIADTS
Sbjct: 1056 LSDEVYVMQPPGFVDKDNPHHVCRLHKALYGLKQAPRAWYQELRSYLLTQGFVNSIADTS 1115

Query: 576  LFILHDKGLXXXXXXXXXXXXXXGNNATSVQEFITVLARRFSLKDLGTLQYFLGVEVVPR 755
            LF L  K                G++   +  FI  LA RFSLKDLG + YFLG+E    
Sbjct: 1116 LFTLRHKRTILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATRT 1175

Query: 756  PQGLLLSQRKYIVDLLARTKMTDARPIXXXXXXXXXXXXQSGTALTDPTEFRTVVGSLQY 935
             +GL L Q++Y++DLL +T M  A P+             SGT L  P+E+R V+GSLQY
Sbjct: 1176 SKGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGTPLDKPSEYRAVLGSLQY 1235

Query: 936  LSLTRPDIAYVVNKLSQYMHRPTSDHWNAVKRLLRYLCGTLDKGILLHHQSPLALHAYSD 1115
            LS TRPDIAY VN+LSQYMH PT  HW A KR+LRYL GT   GI +   +PL LHAYSD
Sbjct: 1236 LSFTRPDIAYAVNRLSQYMHCPTDLHWQAAKRILRYLAGTPSHGIFIRADTPLKLHAYSD 1295

Query: 1116 ADWAGNKDDFTSTSAYIVY 1172
            ADWAG+ D++ ST+AYI+Y
Sbjct: 1296 ADWAGDTDNYNSTNAYILY 1314