BLASTX nr result
ID: Aconitum23_contig00033772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00033772
(525 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis s... 352 5e-95
ref|YP_009169348.1| RNA polymerase beta subunit (chloroplast) [C... 350 2e-94
gb|AKM98249.1| RNA polymerase beta subunit (chloroplast) [Pulsat... 350 2e-94
gb|AKM98073.1| RNA polymerase beta subunit (chloroplast) [Anemon... 350 2e-94
ref|YP_009093942.1| RNA polymerase beta subunit (chloroplast) [N... 350 2e-94
ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea] ... 350 2e-94
ref|YP_009163009.1| RNA polymerase beta subunit (chloroplast) [S... 350 3e-94
gb|AIZ57525.1| RNA polymerase beta subunit (chloroplast) [Clemat... 349 4e-94
gb|AGN73972.1| RNA polymerase beta subunit (chloroplast) [Aconit... 349 5e-94
ref|YP_004327649.1| RNA polymerase beta subunit [Hevea brasilien... 348 1e-93
ref|YP_319757.1| RNA polymerase beta subunit [Acorus calamus] gi... 347 2e-93
sp|Q5QA72.1|RPOB_ACOGR RecName: Full=DNA-directed RNA polymerase... 347 2e-93
gb|AAZ03991.1| RNA polymerase beta chain [Acorus americanus] 347 2e-93
ref|YP_001586174.1| RNA polymerase beta subunit [Acorus american... 347 2e-93
sp|Q3V542.2|RPOB_ACOCL RecName: Full=DNA-directed RNA polymerase... 347 2e-93
ref|YP_001004178.1| RNA polymerase beta subunit [Ranunculus macr... 347 2e-93
ref|YP_008592631.1| RNA polymerase beta subunit (chloroplast) [B... 347 2e-93
ref|YP_008081449.1| RNA polymerase beta subunit (chloroplast) [T... 347 3e-93
gb|ADD31192.1| RNA polymerase beta subunit protein (chloroplast)... 347 3e-93
ref|YP_002720104.1| rpoB [Jatropha curcas] gi|224979557|gb|ACN72... 347 3e-93
>ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis saniculifolia]
gi|226933874|gb|ACO92007.1| RNA polymerase beta subunit
(chloroplast) [Megaleranthis saniculifolia]
Length = 1071
Score = 352 bits (904), Expect = 5e-95
Identities = 172/175 (98%), Positives = 172/175 (98%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 786 VIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 845
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL
Sbjct: 846 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 905
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 906 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 960
>ref|YP_009169348.1| RNA polymerase beta subunit (chloroplast) [Clematis terniflora]
gi|687814847|gb|AIQ81089.1| RNA polymerase beta subunit
(chloroplast) [Clematis terniflora]
Length = 1070
Score = 350 bits (899), Expect = 2e-94
Identities = 171/175 (97%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWI KKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VIDVRWIHKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL
Sbjct: 845 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 905 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 959
>gb|AKM98249.1| RNA polymerase beta subunit (chloroplast) [Pulsatilla pratensis]
gi|844170448|gb|AKM98337.1| RNA polymerase beta subunit
(chloroplast) [Pulsatilla pratensis]
Length = 1082
Score = 350 bits (899), Expect = 2e-94
Identities = 171/175 (97%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWI KKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 797 VIDVRWIHKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 856
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL
Sbjct: 857 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 916
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 917 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 971
>gb|AKM98073.1| RNA polymerase beta subunit (chloroplast) [Anemone patens]
gi|844170200|gb|AKM98161.1| RNA polymerase beta subunit
(chloroplast) [Anemone patens]
gi|844170580|gb|AKM98425.1| RNA polymerase beta subunit
(chloroplast) [Pulsatilla vernalis]
gi|844170721|gb|AKM98513.1| RNA polymerase beta subunit
(chloroplast) [Pulsatilla vernalis]
Length = 1082
Score = 350 bits (899), Expect = 2e-94
Identities = 171/175 (97%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWI KKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 797 VIDVRWIHKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 856
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL
Sbjct: 857 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 916
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 917 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 971
>ref|YP_009093942.1| RNA polymerase beta subunit (chloroplast) [Nelumbo nucifera]
gi|224474214|gb|ACN49400.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|290489618|gb|ADD31193.1| RNA polymerase beta subunit
protein (chloroplast) [Nelumbo nucifera]
gi|383286789|gb|AFH01439.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|519666904|gb|AGO98516.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|725824035|gb|AIY33814.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
Length = 1070
Score = 350 bits (898), Expect = 2e-94
Identities = 170/175 (97%), Positives = 172/175 (98%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREI+VGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VIDVRWIQKKGGSSYNPETIRVYISQKREIRVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 845 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 905 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 959
>ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea]
gi|224474126|gb|ACN49315.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo lutea] gi|383286884|gb|AFH01533.1|
RNA polymerase beta subunit (chloroplast) [Nelumbo lutea]
Length = 1070
Score = 350 bits (898), Expect = 2e-94
Identities = 170/175 (97%), Positives = 172/175 (98%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREI+VGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VIDVRWIQKKGGSSYNPETIRVYISQKREIRVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 845 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 905 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 959
>ref|YP_009163009.1| RNA polymerase beta subunit (chloroplast) [Sinopodophyllum hexandrum]
gi|909719776|gb|AKT94044.1| RNA polymerase beta subunit
(chloroplast) [Sinopodophyllum hexandrum]
Length = 1070
Score = 350 bits (897), Expect = 3e-94
Identities = 169/175 (96%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRW+ KKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VIDVRWVHKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 845 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEA KQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 905 YEAGKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 959
>gb|AIZ57525.1| RNA polymerase beta subunit (chloroplast) [Clematis fusca var.
coreana]
Length = 1082
Score = 349 bits (896), Expect = 4e-94
Identities = 170/175 (97%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWI KKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 797 VIDVRWIHKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 856
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL
Sbjct: 857 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 916
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEAS+QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 917 YEASRQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 971
>gb|AGN73972.1| RNA polymerase beta subunit (chloroplast) [Aconitum barbatum var.
puberulum]
Length = 1089
Score = 349 bits (895), Expect = 5e-94
Identities = 170/175 (97%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQK+GGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 804 VIDVRWIQKRGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 863
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL
Sbjct: 864 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 923
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEAS QTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 924 YEASTQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 978
>ref|YP_004327649.1| RNA polymerase beta subunit [Hevea brasiliensis]
gi|308523494|gb|ADO33544.1| RNA polymerase beta subunit
[Hevea brasiliensis]
Length = 1070
Score = 348 bits (892), Expect = 1e-93
Identities = 169/175 (96%), Positives = 170/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
G PVDMVFNPLGVPSRMNVGQIFECSLGL GDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 845 GRPVDMVFNPLGVPSRMNVGQIFECSLGLTGDLLDRHYRIAPFDERYEQEASRKLVFSEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGK YILK IHQ DDKIH
Sbjct: 905 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIH 959
>ref|YP_319757.1| RNA polymerase beta subunit [Acorus calamus]
gi|74381701|emb|CAI53786.1| RNA polymerase beta subunit
[Acorus calamus]
Length = 1083
Score = 347 bits (891), Expect = 2e-93
Identities = 169/175 (96%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKIL RQDMPYLQD
Sbjct: 798 VIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDMPYLQD 857
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 858 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 917
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV+IGKSYILK IHQ DDKIH
Sbjct: 918 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIH 972
>sp|Q5QA72.1|RPOB_ACOGR RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta, partial
(chloroplast) [Acorus gramineus]
gi|56122473|gb|AAV74361.1| RpoB (chloroplast) [Acorus
gramineus]
Length = 1071
Score = 347 bits (891), Expect = 2e-93
Identities = 169/175 (96%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKIL RQDMPYLQD
Sbjct: 786 VIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDMPYLQD 845
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 846 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 905
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV+IGKSYILK IHQ DDKIH
Sbjct: 906 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIH 960
>gb|AAZ03991.1| RNA polymerase beta chain [Acorus americanus]
Length = 1068
Score = 347 bits (891), Expect = 2e-93
Identities = 169/175 (96%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKIL RQDMPYLQD
Sbjct: 783 VIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDMPYLQD 842
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 843 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 902
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV+IGKSYILK IHQ DDKIH
Sbjct: 903 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIH 957
>ref|YP_001586174.1| RNA polymerase beta subunit [Acorus americanus]
gi|182676548|sp|A9LYH7.1|RPOB_ACOAM RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Acorus americanus]
gi|160369845|gb|ABX38736.1| RNA polymerase beta subunit
(chloroplast) [Acorus americanus]
Length = 1083
Score = 347 bits (891), Expect = 2e-93
Identities = 169/175 (96%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKIL RQDMPYLQD
Sbjct: 798 VIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDMPYLQD 857
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 858 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 917
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV+IGKSYILK IHQ DDKIH
Sbjct: 918 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIH 972
>sp|Q3V542.2|RPOB_ACOCL RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Acorus calamus]
Length = 1071
Score = 347 bits (891), Expect = 2e-93
Identities = 169/175 (96%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKIL RQDMPYLQD
Sbjct: 786 VIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILSRQDMPYLQD 845
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 846 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 905
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV+IGKSYILK IHQ DDKIH
Sbjct: 906 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDDKIH 960
>ref|YP_001004178.1| RNA polymerase beta subunit [Ranunculus macranthus]
gi|69216920|gb|AAZ03994.1| RNA polymerase beta chain
[Ranunculus macranthus] gi|85540796|gb|ABC70748.1| RNA
polymerase beta subunit (chloroplast) [Ranunculus
macranthus]
Length = 1070
Score = 347 bits (891), Expect = 2e-93
Identities = 168/175 (96%), Positives = 171/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
V+DVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VVDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAG+LLDRHYRISPFDERYEQEASRKLVFSEL
Sbjct: 845 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGNLLDRHYRISPFDERYEQEASRKLVFSEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
Y+ASKQT NPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 905 YQASKQTGNPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 959
>ref|YP_008592631.1| RNA polymerase beta subunit (chloroplast) [Berberis bealei]
gi|536462672|gb|AGU37037.1| RNA polymerase beta subunit
(chloroplast) [Berberis bealei]
Length = 1070
Score = 347 bits (890), Expect = 2e-93
Identities = 169/175 (96%), Positives = 170/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWI KKGGSSYNPE IRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VIDVRWIHKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 845 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 905 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 959
>ref|YP_008081449.1| RNA polymerase beta subunit (chloroplast) [Trochodendron aralioides]
gi|290489652|gb|ADD31210.1| RNA polymerase beta subunit
protein (chloroplast) [Trochodendron aralioides]
gi|479279288|gb|AGJ72141.1| RNA polymerase beta subunit
(chloroplast) [Trochodendron aralioides]
Length = 1070
Score = 347 bits (889), Expect = 3e-93
Identities = 169/175 (96%), Positives = 170/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRI+PFDERYEQEASRKLVF EL
Sbjct: 845 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFPEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 905 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 959
>gb|ADD31192.1| RNA polymerase beta subunit protein (chloroplast) [Meliosma aff.
cuneifolia Moore 333]
Length = 1070
Score = 347 bits (889), Expect = 3e-93
Identities = 169/175 (96%), Positives = 170/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 785 VIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 844
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 845 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSEL 904
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGK IFDGRTGDPFEQPVIIGKSYILK IHQ DDKIH
Sbjct: 905 YEASKQTANPWVFEPEYPGKGIIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIH 959
>ref|YP_002720104.1| rpoB [Jatropha curcas] gi|224979557|gb|ACN72684.1| rpoB [Jatropha
curcas]
Length = 1072
Score = 347 bits (889), Expect = 3e-93
Identities = 169/175 (96%), Positives = 170/175 (97%)
Frame = -1
Query: 525 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 346
VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD
Sbjct: 787 VIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQD 846
Query: 345 GTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRHYRISPFDERYEQEASRKLVFSEL 166
G PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRHYRI+PFDERYEQEASRKLVFSEL
Sbjct: 847 GRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRHYRIAPFDERYEQEASRKLVFSEL 906
Query: 165 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKSYILK*IHQDDDKIH 1
YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGK YILK IHQ DDKIH
Sbjct: 907 YEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIH 961