BLASTX nr result

ID: Aconitum23_contig00033639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00033639
         (369 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010251396.1| PREDICTED: putative pentatricopeptide repeat...    62   2e-07
emb|CDP12886.1| unnamed protein product [Coffea canephora]             58   2e-06
ref|XP_008394234.1| PREDICTED: putative pentatricopeptide repeat...    56   9e-06

>ref|XP_010251396.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Nelumbo nucifera]
           gi|719985466|ref|XP_010251397.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At5g08310,
           mitochondrial [Nelumbo nucifera]
          Length = 869

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 29/57 (50%), Positives = 40/57 (70%)
 Frame = -1

Query: 174 STIQTLTTIFTKRLYIQNKAELQTLGEQLSPTIVEIVLKGLKSWRIANDFFIWASEQ 4
           + ++ LT IFT +  ++   EL TLG +L+   VE VLKGLKSWRIA +FF WA++Q
Sbjct: 72  TVVEELTAIFTNQPLLRTSEELTTLGTKLNTETVESVLKGLKSWRIAYEFFSWAADQ 128


>emb|CDP12886.1| unnamed protein product [Coffea canephora]
          Length = 819

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 162 TLTTIFTKRLYIQNKAELQTLGEQLSPTIVEIVLKGLKSWRIANDFFIWASEQ 4
           +L +IFT+R +I    EL  LG +L+   VE VLKGLK+W+IA+ FF WAS Q
Sbjct: 42  SLISIFTRRPFIPEGQELNVLGSKLTTETVETVLKGLKNWKIADRFFKWASNQ 94


>ref|XP_008394234.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Malus domestica]
          Length = 778

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/58 (46%), Positives = 37/58 (63%)
 Frame = -1

Query: 177 PSTIQTLTTIFTKRLYIQNKAELQTLGEQLSPTIVEIVLKGLKSWRIANDFFIWASEQ 4
           PS +  L +IFTKR +  +  EL+TL  +L+   VE VL GL+SW+ A+ FF WA  Q
Sbjct: 49  PSLVSALISIFTKRPFSPDDPELKTLAPRLTTKAVESVLNGLRSWKTAHVFFTWAPNQ 106


Top