BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00033581
         (408 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21137.3| unnamed protein product [Vitis vinifera]              190   3e-46
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a...   190   3e-46
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...   186   8e-45
gb|ACP41915.1| RNA polymerase IV, partial [Heliosperma pusillum]      184   2e-44
ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV a...   184   2e-44
gb|ACQ99762.1| RNA polymerase IV, partial [Heliosperma veselskyi...   184   2e-44
gb|ACQ99761.1| RNA polymerase IV, partial [Heliosperma pusillum]      184   2e-44
gb|ACP41914.1| RNA polymerase IV, partial [Heliosperma macranthum]    183   4e-44
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   183   4e-44
gb|KJB07693.1| hypothetical protein B456_001G037900 [Gossypium r...   183   5e-44
ref|XP_012452401.1| PREDICTED: DNA-directed RNA polymerase D sub...   183   5e-44
ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV a...   183   5e-44
gb|KHG03399.1| DNA-directed RNA polymerase D subunit 2a -like pr...   183   5e-44
gb|ACP41916.1| RNA polymerase IV, partial [Heliosperma veselskyi...   183   5e-44
ref|XP_010101029.1| DNA-directed RNA polymerase D subunit 2a [Mo...   182   6e-44
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   182   6e-44
gb|ACQ99759.1| RNA polymerase IV, partial [Heliosperma macranthum]    182   8e-44
gb|ACQ99760.1| RNA polymerase IV, partial [Heliosperma macranthum]    182   1e-43
ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV a...   181   1e-43
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a...   181   1e-43

>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  190 bits (483), Expect = 3e-46
 Identities = 96/139 (69%), Positives = 108/139 (77%), Gaps = 4/139 (2%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF+D+GRI+RPLLVVENLKK+K+ K  D+   SLL+K           EDC  A  +KY
Sbjct: 674  RIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKY 733

Query: 228  LLSGDEC----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTNP 61
            LL G +     YTHCELD SFLLGLSCGIIP+ NHDHA+RVLYQS+KHSQQAIGFSTTNP
Sbjct: 734  LLKGHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNP 793

Query: 60   NIRVDTLSHQLYYPQVPLF 4
            NIRVDTLSHQLYYPQ PLF
Sbjct: 794  NIRVDTLSHQLYYPQRPLF 812


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Vitis vinifera] gi|731386102|ref|XP_010648748.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Vitis vinifera]
          Length = 1198

 Score =  190 bits (483), Expect = 3e-46
 Identities = 96/139 (69%), Positives = 108/139 (77%), Gaps = 4/139 (2%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF+D+GRI+RPLLVVENLKK+K+ K  D+   SLL+K           EDC  A  +KY
Sbjct: 638  RIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKY 697

Query: 228  LLSGDEC----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTNP 61
            LL G +     YTHCELD SFLLGLSCGIIP+ NHDHA+RVLYQS+KHSQQAIGFSTTNP
Sbjct: 698  LLKGHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNP 757

Query: 60   NIRVDTLSHQLYYPQVPLF 4
            NIRVDTLSHQLYYPQ PLF
Sbjct: 758  NIRVDTLSHQLYYPQRPLF 776


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tomentosiformis]
          Length = 1220

 Score =  186 bits (471), Expect = 8e-45
 Identities = 95/140 (67%), Positives = 106/140 (75%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF+D+GRI+RPLLVV NLKKIK+ K GDY   SLL+            EDC+ A  V+Y
Sbjct: 660  RIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEY 719

Query: 228  LLSGDE-----CYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
            LL  D+      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQS+KHSQQAIGFST N
Sbjct: 720  LLKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVN 779

Query: 63   PNIRVDTLSHQLYYPQVPLF 4
            PNIRVDT +HQLYYPQ PLF
Sbjct: 780  PNIRVDTNTHQLYYPQRPLF 799


>gb|ACP41915.1| RNA polymerase IV, partial [Heliosperma pusillum]
          Length = 475

 Score =  184 bits (468), Expect = 2e-44
 Identities = 91/140 (65%), Positives = 109/140 (77%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408 RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
           RIF D+GRI+RPLLVVENL+KIK  K  +++  +LL+K           EDC+ A E+KY
Sbjct: 80  RIFCDAGRILRPLLVVENLRKIKLLKGDEFSFQTLLDKGILELIGVEEEEDCRTAWEIKY 139

Query: 228 LLSGD-----ECYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
           L +GD     E YTHCELD SFLLG+SCGIIPF NHDHA+RVLYQS+KHS QAIG++TTN
Sbjct: 140 LFTGDKGKGLEKYTHCELDLSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYATTN 199

Query: 63  PNIRVDTLSHQLYYPQVPLF 4
           PNIR+DTLSHQ+YYPQ PLF
Sbjct: 200 PNIRIDTLSHQMYYPQRPLF 219


>ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Jatropha curcas] gi|802626342|ref|XP_012076430.1|
            PREDICTED: DNA-directed RNA polymerases IV and V subunit
            2-like [Jatropha curcas] gi|643724314|gb|KDP33515.1|
            hypothetical protein JCGZ_07086 [Jatropha curcas]
          Length = 1209

 Score =  184 bits (467), Expect = 2e-44
 Identities = 94/140 (67%), Positives = 107/140 (76%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF D+GRI+RPLLVVENL KIK+ K G+Y   SLL+K           EDC  A  +K+
Sbjct: 648  RIFADAGRILRPLLVVENLHKIKAFKGGNYTFQSLLDKGIIEFIGTEEEEDCSTAWGIKF 707

Query: 228  LLSGDEC-----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
            L++G +      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQ+QKHSQQAIGF TTN
Sbjct: 708  LVAGVDKKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTN 767

Query: 63   PNIRVDTLSHQLYYPQVPLF 4
            PNIRVDTLSHQL+YPQ PLF
Sbjct: 768  PNIRVDTLSHQLHYPQRPLF 787


>gb|ACQ99762.1| RNA polymerase IV, partial [Heliosperma veselskyi subsp. veselskyi]
          Length = 474

 Score =  184 bits (467), Expect = 2e-44
 Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408 RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
           RIF D+GRI+RPLLVVENL+KIK  K  DY+  +LL+K           EDC  A E+KY
Sbjct: 80  RIFCDAGRILRPLLVVENLRKIKLLKGDDYSFQTLLDKGILELIGVEEEEDCCTAWEIKY 139

Query: 228 LLSGD-----ECYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
           L  GD     E YTHCELD SFLLG+SCGIIPF NHDHA+RVLYQS+KHS QAIG+++TN
Sbjct: 140 LFMGDKGKGLEKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTN 199

Query: 63  PNIRVDTLSHQLYYPQVPLF 4
           PNIR+DTLSHQ+YYPQ PLF
Sbjct: 200 PNIRIDTLSHQMYYPQRPLF 219


>gb|ACQ99761.1| RNA polymerase IV, partial [Heliosperma pusillum]
          Length = 443

 Score =  184 bits (467), Expect = 2e-44
 Identities = 92/140 (65%), Positives = 107/140 (76%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408 RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
           RIF D+GRI+RPLLVVENL+KIK  K  DY+  +LL+K           EDC  A E+KY
Sbjct: 48  RIFCDAGRILRPLLVVENLRKIKLLKGDDYSFQTLLDKGILELIGVEEEEDCCTAWEIKY 107

Query: 228 LLSGD-----ECYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
           L  GD     E YTHCELD SFLLG+SCGIIPF NHDHA+RVLYQS+KHS QAIG+++TN
Sbjct: 108 LFMGDKGKGLEKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTN 167

Query: 63  PNIRVDTLSHQLYYPQVPLF 4
           PNIR+DTLSHQ+YYPQ PLF
Sbjct: 168 PNIRIDTLSHQMYYPQRPLF 187


>gb|ACP41914.1| RNA polymerase IV, partial [Heliosperma macranthum]
          Length = 475

 Score =  183 bits (465), Expect = 4e-44
 Identities = 90/140 (64%), Positives = 109/140 (77%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408 RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
           RIF D+GRI+RPLLVVENL+KIK  K  +++  +LL+K           EDC+ A E+KY
Sbjct: 80  RIFCDAGRILRPLLVVENLRKIKLLKGDEFSFQTLLDKGILELIGVEEEEDCRTAWEIKY 139

Query: 228 LLSGD-----ECYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
           L +G+     E YTHCELD SFLLG+SCGIIPF NHDHA+RVLYQS+KHS QAIG++TTN
Sbjct: 140 LFTGEKGKGLEKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYATTN 199

Query: 63  PNIRVDTLSHQLYYPQVPLF 4
           PNIR+DTLSHQ+YYPQ PLF
Sbjct: 200 PNIRIDTLSHQMYYPQRPLF 219


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  183 bits (465), Expect = 4e-44
 Identities = 94/140 (67%), Positives = 105/140 (75%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF+DSGRI+RPLLVV NLKKIK+ K GDY   SLL+            EDC+ A  V+Y
Sbjct: 657  RIFSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEY 716

Query: 228  LLSGDE-----CYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
            +L  D+      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQS+KHSQQAIGFST N
Sbjct: 717  ILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVN 776

Query: 63   PNIRVDTLSHQLYYPQVPLF 4
            PN RVDT +HQLYYPQ PLF
Sbjct: 777  PNNRVDTNTHQLYYPQRPLF 796


>gb|KJB07693.1| hypothetical protein B456_001G037900 [Gossypium raimondii]
          Length = 1038

 Score =  183 bits (464), Expect = 5e-44
 Identities = 96/142 (67%), Positives = 109/142 (76%), Gaps = 6/142 (4%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCK-KGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVK 232
            RIFTD+GRI+RPLLVVENL K+K+ K K +Y    LL+K           EDC+ A  ++
Sbjct: 642  RIFTDAGRILRPLLVVENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIR 701

Query: 231  YLLSGDEC-----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTT 67
            YLL+  E      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQ+QKHSQQAIGFSTT
Sbjct: 702  YLLTEVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTT 761

Query: 66   NPNIRVDTLSHQLYYPQVPLFH 1
            NPNIRVDTLSHQ+YYPQ PLFH
Sbjct: 762  NPNIRVDTLSHQMYYPQRPLFH 783


>ref|XP_012452401.1| PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
            raimondii] gi|763740193|gb|KJB07692.1| hypothetical
            protein B456_001G037900 [Gossypium raimondii]
          Length = 1204

 Score =  183 bits (464), Expect = 5e-44
 Identities = 96/142 (67%), Positives = 109/142 (76%), Gaps = 6/142 (4%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCK-KGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVK 232
            RIFTD+GRI+RPLLVVENL K+K+ K K +Y    LL+K           EDC+ A  ++
Sbjct: 642  RIFTDAGRILRPLLVVENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIR 701

Query: 231  YLLSGDEC-----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTT 67
            YLL+  E      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQ+QKHSQQAIGFSTT
Sbjct: 702  YLLTEVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTT 761

Query: 66   NPNIRVDTLSHQLYYPQVPLFH 1
            NPNIRVDTLSHQ+YYPQ PLFH
Sbjct: 762  NPNIRVDTLSHQMYYPQRPLFH 783


>ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Populus euphratica]
          Length = 1190

 Score =  183 bits (464), Expect = 5e-44
 Identities = 96/140 (68%), Positives = 108/140 (77%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF+D+GRI+RPLLVVENL KIK+ K G+Y   SLL+K           EDC  A  +K+
Sbjct: 629  RIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKF 688

Query: 228  LLSGDEC-----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
            LL+  E      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQ+QKHSQQAIGFSTTN
Sbjct: 689  LLADIEGKQPMKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 748

Query: 63   PNIRVDTLSHQLYYPQVPLF 4
            PNIRVDTLSHQL+YPQ PLF
Sbjct: 749  PNIRVDTLSHQLHYPQRPLF 768


>gb|KHG03399.1| DNA-directed RNA polymerase D subunit 2a -like protein [Gossypium
            arboreum]
          Length = 1204

 Score =  183 bits (464), Expect = 5e-44
 Identities = 96/142 (67%), Positives = 109/142 (76%), Gaps = 6/142 (4%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCK-KGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVK 232
            RIFTD+GRI+RPLLVVENL K+K+ K K +Y    LL+K           EDC+ A  ++
Sbjct: 642  RIFTDAGRILRPLLVVENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIR 701

Query: 231  YLLSGDEC-----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTT 67
            YLL+  E      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQ+QKHSQQAIGFSTT
Sbjct: 702  YLLTEVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTT 761

Query: 66   NPNIRVDTLSHQLYYPQVPLFH 1
            NPNIRVDTLSHQ+YYPQ PLFH
Sbjct: 762  NPNIRVDTLSHQMYYPQRPLFH 783


>gb|ACP41916.1| RNA polymerase IV, partial [Heliosperma veselskyi subsp. veselskyi]
          Length = 475

 Score =  183 bits (464), Expect = 5e-44
 Identities = 90/140 (64%), Positives = 109/140 (77%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408 RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
           RIF D+GRI+RPLLVVENL+KIK  K  +++  +LL+K           EDC+ A E+KY
Sbjct: 80  RIFCDAGRILRPLLVVENLRKIKLLKGDEFSFQTLLDKGILELIGVEEEEDCRTAWEIKY 139

Query: 228 LLSGD-----ECYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
           L +G+     E YTHCELD SFLLG+SCGIIPF NHDHA+RVLYQS+KHS QAIG++TTN
Sbjct: 140 LFTGEKGKGLEKYTHCELDLSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYATTN 199

Query: 63  PNIRVDTLSHQLYYPQVPLF 4
           PNIR+DTLSHQ+YYPQ PLF
Sbjct: 200 PNIRIDTLSHQMYYPQRPLF 219


>ref|XP_010101029.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
            gi|587898230|gb|EXB86677.1| DNA-directed RNA polymerase D
            subunit 2a [Morus notabilis]
          Length = 1196

 Score =  182 bits (463), Expect = 6e-44
 Identities = 93/139 (66%), Positives = 105/139 (75%), Gaps = 4/139 (2%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF+DSGRI+RPLLVVENL +IK  K+G Y  HSLL+K           EDC+ A  +KY
Sbjct: 634  RIFSDSGRILRPLLVVENLNRIKPSKEGKYTFHSLLDKGIIELIGAEEEEDCRTAWGIKY 693

Query: 228  LLSGDEC----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTNP 61
            L   D      YTHCELD SFLL +SCGIIPF NHDHA+RVLYQ+QKHSQQAIGF TTNP
Sbjct: 694  LFMEDGGKPVNYTHCELDMSFLLSVSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNP 753

Query: 60   NIRVDTLSHQLYYPQVPLF 4
            +IRVDTLSHQL+YPQ PLF
Sbjct: 754  DIRVDTLSHQLHYPQRPLF 772


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  182 bits (463), Expect = 6e-44
 Identities = 94/140 (67%), Positives = 107/140 (76%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF+D+GRI+RPLLVV+NL KI++ K G+    SLL+K           EDC  A  +K+
Sbjct: 642  RIFSDAGRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKF 701

Query: 228  LLSGDEC-----YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
            LLSG +      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQ+QKHSQQAIGF TTN
Sbjct: 702  LLSGVDGKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTN 761

Query: 63   PNIRVDTLSHQLYYPQVPLF 4
            PNIRVDTLSHQLYYPQ PLF
Sbjct: 762  PNIRVDTLSHQLYYPQRPLF 781


>gb|ACQ99759.1| RNA polymerase IV, partial [Heliosperma macranthum]
          Length = 479

 Score =  182 bits (462), Expect = 8e-44
 Identities = 91/140 (65%), Positives = 107/140 (76%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408 RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
           RIF D+GRI+RPLLVVENL+KIK  K  D++  +LL+K           EDC  A E+KY
Sbjct: 80  RIFCDAGRILRPLLVVENLRKIKLLKGDDFSFQTLLDKGILELIGVEEEEDCCTAWEIKY 139

Query: 228 LLSGD-----ECYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
           L  GD     E YTHCELD SFLLG+SCGIIPF NHDHA+RVLYQS+KHS QAIG+++TN
Sbjct: 140 LFVGDKGKGLEKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTN 199

Query: 63  PNIRVDTLSHQLYYPQVPLF 4
           PNIR+DTLSHQ+YYPQ PLF
Sbjct: 200 PNIRIDTLSHQMYYPQRPLF 219


>gb|ACQ99760.1| RNA polymerase IV, partial [Heliosperma macranthum]
          Length = 479

 Score =  182 bits (461), Expect = 1e-43
 Identities = 90/140 (64%), Positives = 107/140 (76%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408 RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
           RIF D+GRI+RPLLVVENL+KIK  K  D++  +LL+K           EDC  A E+KY
Sbjct: 80  RIFCDAGRILRPLLVVENLRKIKLLKGDDFSFQTLLDKGILELIGVEEEEDCCTAWEIKY 139

Query: 228 LLSGD-----ECYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
           L  GD     E YTHCELD SFLLG+SCGIIPF NHDHA+RVLYQS+KHS QAIG+++TN
Sbjct: 140 LFVGDKGKGLEKYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTN 199

Query: 63  PNIRVDTLSHQLYYPQVPLF 4
           PNIR+DTLSHQ+YYP+ PLF
Sbjct: 200 PNIRIDTLSHQMYYPZRPLF 219


>ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nelumbo nucifera]
          Length = 1201

 Score =  181 bits (460), Expect = 1e-43
 Identities = 97/140 (69%), Positives = 108/140 (77%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            RIF+D+GRI+RPLLVVENL+KIK  K G Y+  SLL+K           EDCQ A  VKY
Sbjct: 639  RIFSDAGRILRPLLVVENLRKIKEFK-GGYSFQSLLDKGVLELVGVEEEEDCQTAWGVKY 697

Query: 228  LL--SGDEC---YTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
            LL    DE    YTHCELD S+L+GLSC +IPF NHDHA+RVLYQS+KHSQQAIGFSTTN
Sbjct: 698  LLMRGKDEPPVNYTHCELDLSYLMGLSCSLIPFANHDHARRVLYQSEKHSQQAIGFSTTN 757

Query: 63   PNIRVDTLSHQLYYPQVPLF 4
            PNIRVDTLSHQLYYPQ PLF
Sbjct: 758  PNIRVDTLSHQLYYPQRPLF 777


>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
            [Nicotiana sylvestris]
          Length = 1216

 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/140 (66%), Positives = 106/140 (75%), Gaps = 5/140 (3%)
 Frame = -1

Query: 408  RIFTDSGRIMRPLLVVENLKKIKSCKKGDYNIHSLLNKXXXXXXXXXXXEDCQIALEVKY 229
            R+F+D+GRI+RPLLVV NLKKIK+ K GD    SLL+            EDC+ A  V+Y
Sbjct: 656  RMFSDAGRILRPLLVVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGVEY 715

Query: 228  LLSGDE-----CYTHCELDPSFLLGLSCGIIPFLNHDHAKRVLYQSQKHSQQAIGFSTTN 64
            LL+ D+      YTHCELD SFLLGLSCGIIPF NHDHA+RVLYQS+KHSQQAIGFST N
Sbjct: 716  LLTADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVN 775

Query: 63   PNIRVDTLSHQLYYPQVPLF 4
            PNIRVDT +HQLYYPQ PLF
Sbjct: 776  PNIRVDTNTHQLYYPQRPLF 795