BLASTX nr result

ID: Aconitum23_contig00033515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00033515
         (722 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    65   3e-08
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    64   1e-07
emb|CDP17738.1| unnamed protein product [Coffea canephora]             57   9e-06

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = -2

Query: 709 GILIIAKGIRCGNLYYLQGSTVMCDVASSVAEENKEFGAARFGRMRLAYVDEKSSNALNK 530
           G L++ KG+   NLYY QGSTV+  VA++ +   K+  AA+   MRL +  EKS   L K
Sbjct: 318 GALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTK 377

Query: 529 QGLLKGT 509
           QGLLKGT
Sbjct: 378 QGLLKGT 384


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 42/68 (61%)
 Frame = -2

Query: 712 SGILIIAKGIRCGNLYYLQGSTVMCDVASSVAEENKEFGAARFGRMRLAYVDEKSSNALN 533
           SG L++ KG+   NLYY QGSTV+  VA++ +   K+  A +   MRL +  EKS     
Sbjct: 318 SGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFT 377

Query: 532 KQGLLKGT 509
           KQGLLKGT
Sbjct: 378 KQGLLKGT 385


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -2

Query: 712 SGILIIAKGIRCGNLYYLQGSTVMCDVA-SSVAEENKEFGAARFGRMRLAYVDEKSSNAL 536
           SG L++ KG+R  NLYY QGSTV+   A ++ +   K+  A +   MRL    EKS   L
Sbjct: 402 SGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNL 461

Query: 535 NKQGLLKGT 509
            KQGLLKGT
Sbjct: 462 AKQGLLKGT 470


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