BLASTX nr result

ID: Aconitum23_contig00033239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00033239
         (344 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein A...    60   5e-07
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A...    59   1e-06
ref|XP_009762743.1| PREDICTED: uncharacterized protein LOC104214...    59   1e-06
emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]    55   4e-06
emb|CAN61691.1| hypothetical protein VITISV_024208 [Vitis vinifera]    55   6e-06
ref|XP_009792684.1| PREDICTED: uncharacterized protein LOC104239...    56   9e-06

>ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 258

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = -2

Query: 328 WLPKHPKCKYGTSMWSAISNLKGEFMASTKCVVGNGRKLSF*DMAWCGNIPLKYEFPEVY 149
           W  K     YGTS+W +I NL   F A T+C V NGRK+ F +  W GN  LK  FP+++
Sbjct: 27  WKTKEVTSTYGTSLWRSIRNLWHGFYAKTECNVSNGRKIRFWEDDWLGNGSLKCLFPDIH 86

Query: 148 SLSLQK 131
            L+ Q+
Sbjct: 87  HLNQQQ 92


>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 397

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 29/66 (43%), Positives = 38/66 (57%)
 Frame = -2

Query: 328 WLPKHPKCKYGTSMWSAISNLKGEFMASTKCVVGNGRKLSF*DMAWCGNIPLKYEFPEVY 149
           W  K     YGTS+W +I NL   F A T C V NGRK+ F +  W GN  LK  FP+++
Sbjct: 90  WKTKEVTSTYGTSLWRSIRNLWHGFYAKTGCNVNNGRKIRFWEDDWLGNGSLKCLFPDIH 149

Query: 148 SLSLQK 131
            L+ Q+
Sbjct: 150 HLNQQE 155


>ref|XP_009762743.1| PREDICTED: uncharacterized protein LOC104214732 [Nicotiana
           sylvestris]
          Length = 172

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 328 WLPKHPKCKYGTSMWSAISNLKGEFMASTKCVVGNGRKLSF*DMAWCGNIPLKYEFPEVY 149
           W  K  +  YG  +W +I NL  + +  +K  VGNGRK+S  D  W G  PLK  FP +Y
Sbjct: 29  WTTKSVRTPYGVGVWKSIRNLWPKLINKSKFKVGNGRKISLWDDNWLGQRPLKDLFPGIY 88

Query: 148 SLSLQKMVV 122
           SL+ Q++ +
Sbjct: 89  SLNQQQVTL 97


>emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]
          Length = 1937

 Score = 55.5 bits (132), Expect(2) = 4e-06
 Identities = 24/71 (33%), Positives = 40/71 (56%)
 Frame = -2

Query: 343  LFRSGWLPKHPKCKYGTSMWSAISNLKGEFMASTKCVVGNGRKLSF*DMAWCGNIPLKYE 164
            L   GW  K  + +YG  +W AI N    F + ++ ++G+G ++ F    WCGN  L+  
Sbjct: 1620 LQEGGWCSKGVRDRYGVGVWKAIRNGXENFRSHSRFIIGDGTRVKFWKDLWCGNQALEEA 1679

Query: 163  FPEVYSLSLQK 131
            FP +++LS+ K
Sbjct: 1680 FPILFNLSVNK 1690



 Score = 21.6 bits (44), Expect(2) = 4e-06
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 134  KDGCICDFLDPGEISGSW 81
            KDG + +  +  E+ GSW
Sbjct: 1690 KDGWVAEAWEEEEVGGSW 1707


>emb|CAN61691.1| hypothetical protein VITISV_024208 [Vitis vinifera]
          Length = 1670

 Score = 54.7 bits (130), Expect(2) = 6e-06
 Identities = 24/71 (33%), Positives = 40/71 (56%)
 Frame = -2

Query: 343  LFRSGWLPKHPKCKYGTSMWSAISNLKGEFMASTKCVVGNGRKLSF*DMAWCGNIPLKYE 164
            L   GW  K  + +YG  +W AI N    F + ++ ++G+G ++ F    WCGN  L+  
Sbjct: 1451 LQEGGWCSKGVRDRYGVGVWKAIRNGWENFRSHSRFIIGDGTRVKFWKDLWCGNQALEEA 1510

Query: 163  FPEVYSLSLQK 131
            FP +++LS+ K
Sbjct: 1511 FPILFNLSVNK 1521



 Score = 21.9 bits (45), Expect(2) = 6e-06
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 134  KDGCICDFLDPGEISGSWNL 75
            K+G + +  +  E+ GSW L
Sbjct: 1521 KEGWVAEAWEEDEVGGSWGL 1540


>ref|XP_009792684.1| PREDICTED: uncharacterized protein LOC104239685 [Nicotiana
           sylvestris]
          Length = 435

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = -2

Query: 334 SGWLPKHPKCKYGTSMWSAISNLKGEFMASTKCVVGNGRKLSF*DMAWCGNIPLKYEFPE 155
           + W     +  YG S W  I N   EF  +   ++GNGRKLSF D  W G+ PL+  FP+
Sbjct: 106 NNWCTNPVRTAYGVSNWRVIRNQWEEFAVNIGFIIGNGRKLSFWDDNWLGHGPLRDNFPD 165

Query: 154 VYSLSLQ 134
           ++SL ++
Sbjct: 166 LHSLVVE 172


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