BLASTX nr result
ID: Aconitum23_contig00032974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00032974
(301 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 91 3e-16
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 91 4e-16
gb|KOM58517.1| hypothetical protein LR48_Vigan11g155100 [Vigna a... 87 6e-15
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 86 8e-15
gb|AFB73911.1| polyprotein [Citrus sinensis] 86 8e-15
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 86 8e-15
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 86 1e-14
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 85 2e-14
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 85 2e-14
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 85 2e-14
gb|AFB73912.1| polyprotein [Citrus sinensis] 85 2e-14
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 85 2e-14
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 84 4e-14
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 84 5e-14
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 83 7e-14
gb|AAF65309.1|AF229252_1 reverse transcriptase [Picea glauca] 82 2e-13
ref|XP_006471418.1| PREDICTED: gibberellin-regulated protein 14-... 80 5e-13
emb|CAN65312.1| hypothetical protein VITISV_002752 [Vitis vinifera] 80 6e-13
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 80 8e-13
ref|XP_008778480.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 79 1e-12
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 90.9 bits (224), Expect = 3e-16
Identities = 43/72 (59%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYL 67
NEEG +++ Y AV S M+AM+CTRPDIA VVSR++AN G+EHW+ VKRI RY+
Sbjct: 1069 NEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYI 1128
Query: 66 RGTSKFALCYGG 31
+GTS ALCYGG
Sbjct: 1129 KGTSDVALCYGG 1140
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 90.5 bits (223), Expect = 4e-16
Identities = 45/66 (68%), Positives = 50/66 (75%), Gaps = 3/66 (4%)
Frame = -2
Query: 222 KRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYLRGTSK 52
++ +I Y AV S MYAMVCTRPDIAH VVSRFL+N GKEHWD VK I RYLRGTSK
Sbjct: 1105 RKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSK 1164
Query: 51 FALCYG 34
LC+G
Sbjct: 1165 LCLCFG 1170
>gb|KOM58517.1| hypothetical protein LR48_Vigan11g155100 [Vigna angularis]
Length = 225
Score = 86.7 bits (213), Expect = 6e-15
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Frame = -2
Query: 213 AKILYVYAVSSPMYAMVCTRPDIAHVV---SRFLANSGKEHWDVVKRIWRYLRGTSKFAL 43
+++ Y AV S MYAM+CTRPDIAH V SRF+AN G+EHW+ VKR+ RY++GTS AL
Sbjct: 4 SRVPYASAVGSLMYAMICTRPDIAHAVGAVSRFMANPGEEHWNAVKRVLRYIKGTSDVAL 63
Query: 42 CYGG 31
C+GG
Sbjct: 64 CFGG 67
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 86.3 bits (212), Expect = 8e-15
Identities = 44/64 (68%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Frame = -2
Query: 213 AKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYLRGTSKFAL 43
AK+ Y AV S MYAMVCTRPDIAH VVSRFL N GKEHW+ VK I RYLRGT+ L
Sbjct: 1107 AKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL 1166
Query: 42 CYGG 31
C+GG
Sbjct: 1167 CFGG 1170
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 86.3 bits (212), Expect = 8e-15
Identities = 43/72 (59%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYL 67
NE K +++ Y AV S M+AM+CTRPDIA VVSR++AN G EHW VKRI RY+
Sbjct: 1080 NEAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYI 1139
Query: 66 RGTSKFALCYGG 31
RGTS ALCYGG
Sbjct: 1140 RGTSDVALCYGG 1151
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 86.3 bits (212), Expect = 8e-15
Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYL 67
+E+ + ++ Y AV S MYAMVCTRPDIAH VVSRFL+N G+EHWD VK I RYL
Sbjct: 1097 SEKEKEEMQRVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYL 1156
Query: 66 RGTSKFALCYG 34
RGTS +LC+G
Sbjct: 1157 RGTSSLSLCFG 1167
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 85.5 bits (210), Expect = 1e-14
Identities = 42/73 (57%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Frame = -2
Query: 240 RNEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRY 70
++EE + +++ Y AV S MYAMVCTRPD+AH VVSRF+ G+EHW VKRI+RY
Sbjct: 1079 QSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRY 1138
Query: 69 LRGTSKFALCYGG 31
LRGTS L YGG
Sbjct: 1139 LRGTSDVGLIYGG 1151
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYL 67
NE +++ Y AV S MYAM+CTRPDIA VVSRF+A+ GKEHW+ VKRI RY+
Sbjct: 1076 NEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYI 1135
Query: 66 RGTSKFALCYGG 31
+GTS A+C+GG
Sbjct: 1136 KGTSGVAVCFGG 1147
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYL 67
NE +++ Y AV S MYAM+CTRPDIA VVSRF+A+ GKEHW+ VKRI RY+
Sbjct: 1076 NEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYI 1135
Query: 66 RGTSKFALCYGG 31
+GTS A+C+GG
Sbjct: 1136 KGTSGVAVCFGG 1147
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYL 67
NE +++ Y AV S MYAM+CTRPDIA VVSRF+A+ GKEHW+ VKRI RY+
Sbjct: 1076 NEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYI 1135
Query: 66 RGTSKFALCYGG 31
+GTS A+C+GG
Sbjct: 1136 KGTSGVAVCFGG 1147
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 85.1 bits (209), Expect = 2e-14
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAHVV---SRFLANSGKEHWDVVKRIWRYL 67
NE K +++ Y AV S M+AM+CTRPDIA V SR++AN G EHW VKRI RY+
Sbjct: 1080 NEAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYI 1139
Query: 66 RGTSKFALCYGG 31
RGTS ALCYGG
Sbjct: 1140 RGTSNVALCYGG 1151
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYL 67
NE +++ Y AV S MYAM+CTRPDIA VVSRF+A+ GKEHW+ VKRI RY+
Sbjct: 1076 NEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYI 1135
Query: 66 RGTSKFALCYGG 31
+GTS A+C+GG
Sbjct: 1136 KGTSGVAVCFGG 1147
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 84.0 bits (206), Expect = 4e-14
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Frame = -2
Query: 213 AKILYVYAVSSPMYAMVCTRPDIAHVV---SRFLANSGKEHWDVVKRIWRYLRGTSKFAL 43
+++ Y AV S MYAM+CTRPDIA V SRF+A+ GKEHW+ VKRI RY+RGTS AL
Sbjct: 1084 SRVPYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAAL 1143
Query: 42 CYGG 31
C+GG
Sbjct: 1144 CFGG 1147
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 83.6 bits (205), Expect = 5e-14
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
Frame = -2
Query: 210 KILYVYAVSSPMYAMVCTRPDIAHVV---SRFLANSGKEHWDVVKRIWRYLRGTSKFALC 40
+I Y AV S MYAMVCTRPDIAHVV SRF++N G+EHW+ VK I RYLRGT+ LC
Sbjct: 1052 RIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLC 1111
Query: 39 YGG 31
+GG
Sbjct: 1112 FGG 1114
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 83.2 bits (204), Expect = 7e-14
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Frame = -2
Query: 240 RNEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRY 70
+++E + +K+ Y AV S MYAMVCTRPD+AH VVSRF+ GKEHW VKRI+RY
Sbjct: 1192 QSDEEKEYMSKVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMTQPGKEHWQAVKRIFRY 1251
Query: 69 LRGTSKFALCYG 34
LRGT+ L YG
Sbjct: 1252 LRGTADVGLIYG 1263
>gb|AAF65309.1|AF229252_1 reverse transcriptase [Picea glauca]
Length = 542
Score = 81.6 bits (200), Expect = 2e-13
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = -2
Query: 201 YVYAVSSPMYAMVCTRPDIAHVV---SRFLANSGKEHWDVVKRIWRYLRGTSKFALCYGG 31
Y AV S MYAMVCTRPDIAH V SR+++ GKEHW VKR++RYL GT+ + LCY G
Sbjct: 370 YASAVGSLMYAMVCTRPDIAHAVGFLSRYMSKLGKEHWTTVKRVFRYLHGTTSYGLCYQG 429
Query: 30 KA 25
++
Sbjct: 430 RS 431
>ref|XP_006471418.1| PREDICTED: gibberellin-regulated protein 14-like [Citrus sinensis]
Length = 290
Score = 80.5 bits (197), Expect = 5e-13
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAHVV---SRFLANSGKEHWDVVKRIWRYL 67
NE K + + Y AV S M+AM+CTRPDIA VV SR++ N E+W VVKRI RY+
Sbjct: 5 NEAERKEMSGVSYTSAVGSLMFAMICTRPDIAQVVGAISRYMTNPNGEYWIVVKRILRYI 64
Query: 66 RGTSKFALCYGG 31
RGTS ALCYGG
Sbjct: 65 RGTSDVALCYGG 76
>emb|CAN65312.1| hypothetical protein VITISV_002752 [Vitis vinifera]
Length = 1057
Score = 80.1 bits (196), Expect = 6e-13
Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = -2
Query: 237 NEEGIKRRAKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYL 67
+E+ + K+ Y AV S MY MVCTRPDIAH VVS+FL+N KEHW VK I +YL
Sbjct: 950 SEKEKEEMRKVSYASAVGSLMYVMVCTRPDIAHAVGVVSKFLSNLDKEHWVAVKWILKYL 1009
Query: 66 RGTSKFALCYG 34
RGTSK LC+G
Sbjct: 1010 RGTSKTCLCFG 1020
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 79.7 bits (195), Expect = 8e-13
Identities = 40/62 (64%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Frame = -2
Query: 207 ILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYLRGTSKFALCY 37
I Y V S MYAMVCTRPDIAH +VSR+LAN K HW+ VK I RYLRGTS +LC+
Sbjct: 469 IPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSLCF 528
Query: 36 GG 31
GG
Sbjct: 529 GG 530
>ref|XP_008778480.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103698265
[Phoenix dactylifera]
Length = 1581
Score = 79.3 bits (194), Expect = 1e-12
Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Frame = -2
Query: 213 AKILYVYAVSSPMYAMVCTRPDIAH---VVSRFLANSGKEHWDVVKRIWRYLRGTSKFAL 43
+KI Y AV S MYAMVCTRPDIA VVSRF++ G EHW VK I RYLRGT + +L
Sbjct: 1441 SKIPYASAVGSLMYAMVCTRPDIAQAVGVVSRFMSCPGLEHWRAVKWILRYLRGTEQMSL 1500
Query: 42 CYGG 31
CYGG
Sbjct: 1501 CYGG 1504