BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00030888
         (403 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010252754.1| PREDICTED: pentatricopeptide repeat-containi...   240   3e-61
emb|CBI25753.3| unnamed protein product [Vitis vinifera]              234   1e-59
ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containi...   234   1e-59
emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]   234   1e-59
ref|XP_004293389.1| PREDICTED: pentatricopeptide repeat-containi...   231   2e-58
ref|XP_006352328.1| PREDICTED: pentatricopeptide repeat-containi...   229   6e-58
gb|KHN42271.1| Pentatricopeptide repeat-containing protein, chlo...   229   8e-58
ref|XP_004250291.1| PREDICTED: pentatricopeptide repeat-containi...   229   8e-58
ref|XP_006584099.1| PREDICTED: pentatricopeptide repeat-containi...   229   8e-58
ref|XP_009796358.1| PREDICTED: pentatricopeptide repeat-containi...   227   3e-57
ref|XP_009591785.1| PREDICTED: pentatricopeptide repeat-containi...   227   3e-57
ref|XP_009379098.1| PREDICTED: pentatricopeptide repeat-containi...   227   3e-57
ref|XP_008370969.1| PREDICTED: pentatricopeptide repeat-containi...   227   3e-57
ref|XP_007026347.1| Pentatricopeptide (PPR) repeat-containing pr...   226   4e-57
ref|XP_012448936.1| PREDICTED: pentatricopeptide repeat-containi...   226   5e-57
ref|XP_009411130.1| PREDICTED: pentatricopeptide repeat-containi...   226   5e-57
gb|KNA14809.1| hypothetical protein SOVF_103760 [Spinacia oleracea]   226   7e-57
ref|XP_003610579.1| pentatricopeptide (PPR) repeat protein [Medi...   226   7e-57
ref|XP_010542188.1| PREDICTED: pentatricopeptide repeat-containi...   225   9e-57
ref|XP_008224621.1| PREDICTED: pentatricopeptide repeat-containi...   224   1e-56

>ref|XP_010252754.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Nelumbo nucifera]
           gi|719989778|ref|XP_010252755.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Nelumbo nucifera]
          Length = 715

 Score =  240 bits (612), Expect = 3e-61
 Identities = 111/132 (84%), Positives = 126/132 (95%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISCAR+C+LP KA+E FE+M +FGC PDDVTY+AMIDAYGRAG++D ALSLYD
Sbjct: 226 NVTFSTIISCARICSLPNKAVEWFEKMPQFGCNPDDVTYAAMIDAYGRAGNIDMALSLYD 285

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRIDLVTF+TLIRIYG+SGNFDGALNVYEEMKALGVKPNLV+YNTLLDAMGRAK
Sbjct: 286 RARTEKWRIDLVTFSTLIRIYGMSGNFDGALNVYEEMKALGVKPNLVIYNTLLDAMGRAK 345

Query: 43  RPWQAKSVYREM 8
           RPWQAKS+Y+EM
Sbjct: 346 RPWQAKSLYKEM 357


>emb|CBI25753.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  234 bits (598), Expect = 1e-59
 Identities = 111/134 (82%), Positives = 123/134 (91%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           NITF+TIISCAR+ +LP KA+E FE+M EFGC PDDVTYSAMIDAYGRAG+VD AL LYD
Sbjct: 211 NITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYD 270

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTF+TLIRIYG+SGNFDG LNVYEEMKALGVKPNLV+YNTLLDAMGRAK
Sbjct: 271 RARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAK 330

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK++Y+EM N
Sbjct: 331 RPWQAKNIYKEMTN 344


>ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vitis vinifera]
          Length = 701

 Score =  234 bits (598), Expect = 1e-59
 Identities = 111/134 (82%), Positives = 123/134 (91%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           NITF+TIISCAR+ +LP KA+E FE+M EFGC PDDVTYSAMIDAYGRAG+VD AL LYD
Sbjct: 211 NITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYD 270

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTF+TLIRIYG+SGNFDG LNVYEEMKALGVKPNLV+YNTLLDAMGRAK
Sbjct: 271 RARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAK 330

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK++Y+EM N
Sbjct: 331 RPWQAKNIYKEMTN 344


>emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
          Length = 701

 Score =  234 bits (598), Expect = 1e-59
 Identities = 111/134 (82%), Positives = 123/134 (91%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           NITF+TIISCAR+ +LP KA+E FE+M EFGC PDDVTYSAMIDAYGRAG+VD AL LYD
Sbjct: 211 NITFSTIISCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYD 270

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTF+TLIRIYG+SGNFDG LNVYEEMKALGVKPNLV+YNTLLDAMGRAK
Sbjct: 271 RARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAK 330

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK++Y+EM N
Sbjct: 331 RPWQAKNIYKEMTN 344



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 41/131 (31%), Positives = 72/131 (54%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           +TF+T+I    M       + ++E M+  G KP+ V Y+ ++DA GRA    +A ++Y  
Sbjct: 282 VTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKE 341

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAKR 41
                 ++   T+A L+R YG +   + AL VY+EMK  G++ ++V+YNTLL        
Sbjct: 342 MTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGY 401

Query: 40  PWQAKSVYREM 8
             +A +++ +M
Sbjct: 402 TEEAAAIFEDM 412


>ref|XP_004293389.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 683

 Score =  231 bits (589), Expect = 2e-58
 Identities = 107/134 (79%), Positives = 122/134 (91%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+T+ISCARMC LP KA+E FE+M  +GC PDDVTYSAMIDAYGRAG+VDKA SLYD
Sbjct: 193 NVTFSTMISCARMCYLPDKAVEWFEKMPSYGCSPDDVTYSAMIDAYGRAGNVDKAFSLYD 252

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTFATLI+I+G SGN+DG LNVYEEMKA+GVKPN+V+YNTLLDAMGRAK
Sbjct: 253 RARTEKWRIDPVTFATLIKIHGQSGNYDGCLNVYEEMKAIGVKPNMVIYNTLLDAMGRAK 312

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK +YREMI+
Sbjct: 313 RPWQAKKIYREMIS 326



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/133 (22%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLY-D 224
           +T+ +++           A+ +++ M+E G + + + Y+ ++      G  D+A+ ++ D
Sbjct: 334 VTYASLLRAFGRARYGDDALNVYKEMKEKGMELNVILYNTLLSMCADIGYTDQAIEIFKD 393

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
              +E  + D  TF+++I IY  SG    A ++  EM   G +PN+ +  +L+   G+AK
Sbjct: 394 MKSSETLKPDSWTFSSMITIYSCSGKVSEAESMLNEMVEAGFQPNIFILTSLIQCYGKAK 453

Query: 43  RPWQAKSVYREMI 5
           R       + +++
Sbjct: 454 RTDDVVRAFNQLL 466



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 30/133 (22%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           + + T++        P +A +++  M   G  P+ VTY++++ A+GRA   D AL++Y  
Sbjct: 299 VIYNTLLDAMGRAKRPWQAKKIYREMISKGSSPNWVTYASLLRAFGRARYGDDALNVYKE 358

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKAL-GVKPNLVVYNTLLDAMGRAK 44
            + +   ++++ + TL+ +    G  D A+ ++++MK+   +KP+   +++++     + 
Sbjct: 359 MKEKGMELNVILYNTLLSMCADIGYTDQAIEIFKDMKSSETLKPDSWTFSSMITIYSCSG 418

Query: 43  RPWQAKSVYREMI 5
           +  +A+S+  EM+
Sbjct: 419 KVSEAESMLNEMV 431


>ref|XP_006352328.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Solanum tuberosum]
          Length = 689

 Score =  229 bits (584), Expect = 6e-58
 Identities = 106/134 (79%), Positives = 121/134 (90%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISCAR CNLP KAIE FE++  FGC+PDDVTYS MIDAYG+AG+VD ALSLYD
Sbjct: 195 NVTFSTIISCARQCNLPEKAIEWFEKLPSFGCEPDDVTYSVMIDAYGKAGNVDMALSLYD 254

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTFATLIRIYG +GNFDG LNVYEEMKALGVKPN+ VYN+LLDAMGRA+
Sbjct: 255 RARTEKWRIDAVTFATLIRIYGAAGNFDGCLNVYEEMKALGVKPNMTVYNSLLDAMGRAR 314

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK++Y EM++
Sbjct: 315 RPWQAKNIYGEMLS 328



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 40/131 (30%), Positives = 72/131 (54%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           +TF T+I            + ++E M+  G KP+   Y++++DA GRA    +A ++Y  
Sbjct: 266 VTFATLIRIYGAAGNFDGCLNVYEEMKALGVKPNMTVYNSLLDAMGRARRPWQAKNIYGE 325

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAKR 41
             +  ++    T+A+LIR YG +   + AL +Y+EMK  G++ ++V+YNTLL        
Sbjct: 326 MLSNGFQPSWGTYASLIRAYGRARYSEDALKIYKEMKEKGLELSVVLYNTLLAMCADVGL 385

Query: 40  PWQAKSVYREM 8
             +A +++ EM
Sbjct: 386 TDEAVNIFEEM 396


>gb|KHN42271.1| Pentatricopeptide repeat-containing protein, chloroplastic [Glycine
           soja]
          Length = 685

 Score =  229 bits (583), Expect = 8e-58
 Identities = 102/134 (76%), Positives = 122/134 (91%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISCAR+C+LP KA+E FE+M  FGC+PDDVTYSAMIDAYGRAG++D AL LYD
Sbjct: 197 NVTFSTIISCARICSLPNKAVEWFEKMSSFGCEPDDVTYSAMIDAYGRAGNIDMALRLYD 256

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWR+D VTF+TLI++YG++GN+DG LNVY+EMK LGVKPN+V+YNTLLDAMGRAK
Sbjct: 257 RARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAK 316

Query: 43  RPWQAKSVYREMIN 2
           RPWQAKS+Y EM N
Sbjct: 317 RPWQAKSIYTEMTN 330


>ref|XP_004250291.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Solanum lycopersicum]
          Length = 689

 Score =  229 bits (583), Expect = 8e-58
 Identities = 106/133 (79%), Positives = 120/133 (90%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISCAR CNLP KAIE FE++  FGC+PDDVTYS MIDAYG+AG+VD ALSLYD
Sbjct: 195 NVTFSTIISCARQCNLPEKAIEWFEKLPSFGCEPDDVTYSVMIDAYGKAGNVDMALSLYD 254

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTFATLIRIYG +GNFDG LNVYEEMKALGVKPN+ VYN+LLDAMGRA+
Sbjct: 255 RARTEKWRIDAVTFATLIRIYGAAGNFDGCLNVYEEMKALGVKPNMTVYNSLLDAMGRAR 314

Query: 43  RPWQAKSVYREMI 5
           RPWQAK++Y EM+
Sbjct: 315 RPWQAKNIYGEML 327



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 40/131 (30%), Positives = 71/131 (54%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           +TF T+I            + ++E M+  G KP+   Y++++DA GRA    +A ++Y  
Sbjct: 266 VTFATLIRIYGAAGNFDGCLNVYEEMKALGVKPNMTVYNSLLDAMGRARRPWQAKNIYGE 325

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAKR 41
                ++    T+A+LIR YG +   + AL +Y+EMK  G++ ++V+YNTLL        
Sbjct: 326 MLTNGFQPSWGTYASLIRAYGRARYGEDALKIYKEMKEKGLELSVVLYNTLLAMCADVGL 385

Query: 40  PWQAKSVYREM 8
             +A +++ EM
Sbjct: 386 TDEAVNIFEEM 396


>ref|XP_006584099.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
           gi|947102696|gb|KRH51188.1| hypothetical protein
           GLYMA_07G267500 [Glycine max]
          Length = 685

 Score =  229 bits (583), Expect = 8e-58
 Identities = 102/134 (76%), Positives = 122/134 (91%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISCAR+C+LP KA+E FE+M  FGC+PDDVTYSAMIDAYGRAG++D AL LYD
Sbjct: 197 NVTFSTIISCARICSLPNKAVEWFEKMSSFGCEPDDVTYSAMIDAYGRAGNIDMALRLYD 256

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWR+D VTF+TLI++YG++GN+DG LNVY+EMK LGVKPN+V+YNTLLDAMGRAK
Sbjct: 257 RARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAK 316

Query: 43  RPWQAKSVYREMIN 2
           RPWQAKS+Y EM N
Sbjct: 317 RPWQAKSIYTEMTN 330


>ref|XP_009796358.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Nicotiana sylvestris]
          Length = 688

 Score =  227 bits (578), Expect = 3e-57
 Identities = 104/134 (77%), Positives = 121/134 (90%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISCAR CNLP KAIE FE++  FGC+PDDVTYS MID+YG+AG+VD AL+LYD
Sbjct: 197 NVTFSTIISCARQCNLPEKAIEWFEKLPSFGCEPDDVTYSVMIDSYGKAGNVDMALNLYD 256

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTFATLIRIYG +GNFDG LNVYEEMKALGV+PN+ VYN+LLDAMGRAK
Sbjct: 257 RARTEKWRIDAVTFATLIRIYGAAGNFDGCLNVYEEMKALGVRPNMAVYNSLLDAMGRAK 316

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK++Y +MI+
Sbjct: 317 RPWQAKNIYADMIS 330



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 40/131 (30%), Positives = 71/131 (54%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           +TF T+I            + ++E M+  G +P+   Y++++DA GRA    +A ++Y  
Sbjct: 268 VTFATLIRIYGAAGNFDGCLNVYEEMKALGVRPNMAVYNSLLDAMGRAKRPWQAKNIYAD 327

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAKR 41
             +  ++    T+A+LIR YG +   + AL +Y EMK  G++ N+V+YNTLL        
Sbjct: 328 MISNGFQPSWGTYASLIRAYGRARYSEDALKIYREMKEKGLELNVVLYNTLLAMCADVGL 387

Query: 40  PWQAKSVYREM 8
             +A +++ EM
Sbjct: 388 TDEAVNIFEEM 398



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/131 (26%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
 Frame = -1

Query: 394 FTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDRAR 215
           + +++        P +A  ++  M   G +P   TY+++I AYGRA   + AL +Y   +
Sbjct: 305 YNSLLDAMGRAKRPWQAKNIYADMISNGFQPSWGTYASLIRAYGRARYSEDALKIYREMK 364

Query: 214 AEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGV-KPNLVVYNTLLDAMGRAKRP 38
            +   +++V + TL+ +    G  D A+N++EEMKA G  +P+   Y++L+     + + 
Sbjct: 365 EKGLELNVVLYNTLLAMCADVGLTDEAVNIFEEMKASGTCQPDSWTYSSLITINSCSGKV 424

Query: 37  WQAKSVYREMI 5
            +A++   EM+
Sbjct: 425 SEAEATLNEMM 435


>ref|XP_009591785.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Nicotiana tomentosiformis]
          Length = 688

 Score =  227 bits (578), Expect = 3e-57
 Identities = 104/134 (77%), Positives = 121/134 (90%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISCAR CNLP KAIE FE++  FGC+PDDVTYS MID+YG+AG+VD AL+LYD
Sbjct: 197 NVTFSTIISCARQCNLPEKAIEWFEKLPSFGCEPDDVTYSVMIDSYGKAGNVDMALNLYD 256

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTFATLIRIYG +GNFDG LNVYEEMKALGV+PN+ VYN+LLDAMGRAK
Sbjct: 257 RARTEKWRIDAVTFATLIRIYGAAGNFDGCLNVYEEMKALGVRPNMAVYNSLLDAMGRAK 316

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK++Y +MI+
Sbjct: 317 RPWQAKNIYADMIS 330



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 38/131 (29%), Positives = 71/131 (54%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           +TF T+I            + ++E M+  G +P+   Y++++DA GRA    +A ++Y  
Sbjct: 268 VTFATLIRIYGAAGNFDGCLNVYEEMKALGVRPNMAVYNSLLDAMGRAKRPWQAKNIYAD 327

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAKR 41
             +  ++    T+A+LIR YG +   + AL +Y E+K  G++ ++V+YNTLL        
Sbjct: 328 MISNGFQPSWGTYASLIRAYGRARYSEDALKIYREVKEKGLELSVVLYNTLLAMCADVGL 387

Query: 40  PWQAKSVYREM 8
             +A +++ EM
Sbjct: 388 TDEAVNIFEEM 398



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
 Frame = -1

Query: 394 FTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDRAR 215
           + +++        P +A  ++  M   G +P   TY+++I AYGRA   + AL +Y   +
Sbjct: 305 YNSLLDAMGRAKRPWQAKNIYADMISNGFQPSWGTYASLIRAYGRARYSEDALKIYREVK 364

Query: 214 AEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGV-KPNLVVYNTLLDAMGRAKRP 38
            +   + +V + TL+ +    G  D A+N++EEMKA G  +P+   Y++L+     + + 
Sbjct: 365 EKGLELSVVLYNTLLAMCADVGLTDEAVNIFEEMKASGTCQPDSWTYSSLITINSCSGKV 424

Query: 37  WQAKSVYREMI 5
            +A++   EM+
Sbjct: 425 SEAETTLNEMM 435


>ref|XP_009379098.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Pyrus x bretschneideri]
          Length = 709

 Score =  227 bits (578), Expect = 3e-57
 Identities = 105/134 (78%), Positives = 120/134 (89%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+T+ISCARMC+LP KA+E FE+M  FGC PDDVTYSAMIDAYGRAG V+ A SLYD
Sbjct: 219 NVTFSTMISCARMCSLPDKAVEWFEKMPSFGCNPDDVTYSAMIDAYGRAGKVEMAFSLYD 278

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTF+TLI+I+G SGNFDG LNVYEEMKA+G KPNLV+YNTLLDAMGRA+
Sbjct: 279 RARTEKWRIDPVTFSTLIKIHGQSGNFDGCLNVYEEMKAIGAKPNLVIYNTLLDAMGRAR 338

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK +YREMI+
Sbjct: 339 RPWQAKKIYREMIS 352



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/133 (23%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           + + T++        P +A +++  M      P+ VTY++++ AYGRA   D AL++Y  
Sbjct: 325 VIYNTLLDAMGRARRPWQAKKIYREMISRELSPNWVTYASLLRAYGRARYSDDALNVYKE 384

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKAL-GVKPNLVVYNTLLDAMGRAK 44
            + +   ++++ + TL+ +    G  D A+ ++EEMK+   +KP+   +++++     + 
Sbjct: 385 MKEKGLELNVILYNTLLAMCADVGYTDEAVGIFEEMKSSETLKPDSWTFSSMITVYSCSG 444

Query: 43  RPWQAKSVYREMI 5
           +  +A++   EM+
Sbjct: 445 KVTEAEATLNEML 457


>ref|XP_008370969.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Malus domestica]
          Length = 709

 Score =  227 bits (578), Expect = 3e-57
 Identities = 105/134 (78%), Positives = 120/134 (89%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+T+ISCARMC+LP KA+E FE+M  FGC PDDVTYSAMIDAYGRAG V+ A SLYD
Sbjct: 219 NVTFSTMISCARMCSLPDKAVEWFEKMPSFGCNPDDVTYSAMIDAYGRAGKVEMAFSLYD 278

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTF+TLI+I+G SGNFDG LNVYEEMKA+G KPNLV+YNTLLDAMGRA+
Sbjct: 279 RARTEKWRIDPVTFSTLIKIHGQSGNFDGCLNVYEEMKAIGAKPNLVIYNTLLDAMGRAR 338

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK +YREMI+
Sbjct: 339 RPWQAKKIYREMIS 352



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 32/133 (24%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           + + T++        P +A +++  M      P+ VTY++++ AYGRA   D AL++Y  
Sbjct: 325 VIYNTLLDAMGRARRPWQAKKIYREMISRELSPNWVTYASLLRAYGRARYSDDALNVYKV 384

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKAL-GVKPNLVVYNTLLDAMGRAK 44
            + +   ++++ + TL+ +    GN D A++++EEMK+   +KP+   +++++     + 
Sbjct: 385 MKEKGLELNVILYNTLLAMCADVGNTDEAVDIFEEMKSSETLKPDSWTFSSMITIYSCSG 444

Query: 43  RPWQAKSVYREMI 5
           +  +A++   EM+
Sbjct: 445 KVTEAEATLNEML 457



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/134 (21%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           +T+ +++           A+ +++ M+E G + + + Y+ ++      G+ D+A+ +++ 
Sbjct: 360 VTYASLLRAYGRARYSDDALNVYKVMKEKGLELNVILYNTLLAMCADVGNTDEAVDIFEE 419

Query: 220 ARA-EKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
            ++ E  + D  TF+++I IY  SG    A     EM   G +PN+ +  +L+   G+AK
Sbjct: 420 MKSSETLKPDSWTFSSMITIYSCSGKVTEAEATLNEMLEAGFEPNIFILTSLIQCYGKAK 479

Query: 43  RPWQAKSVYREMIN 2
           R      ++ ++++
Sbjct: 480 RTDDVVRIFNQLLD 493


>ref|XP_007026347.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
           gi|508781713|gb|EOY28969.1| Pentatricopeptide (PPR)
           repeat-containing protein [Theobroma cacao]
          Length = 700

 Score =  226 bits (577), Expect = 4e-57
 Identities = 104/134 (77%), Positives = 121/134 (90%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+T+ISCAR+C LP KA+E FE+M  +GC PDDVTYSAMIDAYGRAG+VD A +LYD
Sbjct: 210 NVTFSTLISCARVCALPDKAVEWFEKMPIYGCDPDDVTYSAMIDAYGRAGNVDMAFNLYD 269

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTF+TLI+IYGISGN+DG LNVYEEMKALG KPN+V+YNTLLDAMGRAK
Sbjct: 270 RARTEKWRIDPVTFSTLIKIYGISGNYDGCLNVYEEMKALGAKPNVVIYNTLLDAMGRAK 329

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK++Y+EM N
Sbjct: 330 RPWQAKTIYKEMTN 343



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/133 (24%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYDR 221
           + + T++        P +A  +++ M   G  P+  TY+A++ AYGRA   + AL++Y  
Sbjct: 316 VIYNTLLDAMGRAKRPWQAKTIYKEMTNNGFSPNWATYAALLRAYGRARYGEDALNIYKE 375

Query: 220 ARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGV-KPNLVVYNTLLDAMGRAK 44
            + +   + ++ + TL+ +    G  D A+ ++E+MK  G  KP+   Y++L+     + 
Sbjct: 376 MKDKGLELTVILYNTLLAMCADVGYADEAVEIFEDMKNSGTCKPDSWTYSSLITIYSCSG 435

Query: 43  RPWQAKSVYREMI 5
           +  +A+ +  EM+
Sbjct: 436 KVSEAEGIVDEML 448



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFG-CKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           I + T+++         +A+E+FE M+  G CKPD  TYS++I  Y  +G V +A  + D
Sbjct: 386 ILYNTLLAMCADVGYADEAVEIFEDMKNSGTCKPDSWTYSSLITIYSCSGKVSEAEGIVD 445

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
                 +  ++    +LI+ YG + + D  +  +  +  LG+ P+      LL+ M +  
Sbjct: 446 EMLEAGFEPNIFVLTSLIQCYGKAQHTDDVVRTFNRVLELGITPDDRFCGCLLNVMTQTP 505

Query: 43  RPWQAK 26
           R   AK
Sbjct: 506 REELAK 511


>ref|XP_012448936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Gossypium raimondii]
           gi|763801584|gb|KJB68539.1| hypothetical protein
           B456_010G249100 [Gossypium raimondii]
          Length = 699

 Score =  226 bits (576), Expect = 5e-57
 Identities = 102/134 (76%), Positives = 123/134 (91%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+T+ISC+R+C LP+KA+E FE+M  + C PDDVTYSAMIDAYGRAG+VD A +LYD
Sbjct: 209 NVTFSTLISCSRVCGLPSKAVEWFEKMPTYECDPDDVTYSAMIDAYGRAGNVDMAFTLYD 268

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTF+TLI+IYG+SGN+DG LNVYEEMKALGVKPN+V+YNTLLDAMGRAK
Sbjct: 269 RARTEKWRIDPVTFSTLIKIYGVSGNYDGCLNVYEEMKALGVKPNVVIYNTLLDAMGRAK 328

Query: 43  RPWQAKSVYREMIN 2
           RPWQAKS+Y+EM++
Sbjct: 329 RPWQAKSIYKEMLS 342


>ref|XP_009411130.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 715

 Score =  226 bits (576), Expect = 5e-57
 Identities = 102/132 (77%), Positives = 120/132 (90%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+T ISCAR+CNLP KA+E FE+M EFGC PDD+TYSAMIDAYGR+G+V+ AL LYD
Sbjct: 224 NVTFSTAISCARLCNLPAKAVEWFEKMPEFGCHPDDITYSAMIDAYGRSGNVEMALGLYD 283

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWR+D VTFAT+IR+Y +SGNFDGALNVYEEMKALGVKPN+V+YNTLLD+MGRA 
Sbjct: 284 RARNEKWRLDPVTFATVIRVYSVSGNFDGALNVYEEMKALGVKPNVVIYNTLLDSMGRAG 343

Query: 43  RPWQAKSVYREM 8
           RPWQ K++YREM
Sbjct: 344 RPWQVKTIYREM 355


>gb|KNA14809.1| hypothetical protein SOVF_103760 [Spinacia oleracea]
          Length = 689

 Score =  226 bits (575), Expect = 7e-57
 Identities = 102/134 (76%), Positives = 120/134 (89%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISC RMCN+P K +E FE+M  FGC PDDVTYSAMIDAYGRAG+VD+A +LYD
Sbjct: 199 NVTFSTIISCCRMCNMPQKGVEWFEKMPAFGCNPDDVTYSAMIDAYGRAGNVDRAFALYD 258

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR E+W ID+VTF+TLI+IYG +GNFDG LNVYEEMKALG KPNLV+YNTLLDAMGRAK
Sbjct: 259 RARTERWIIDVVTFSTLIKIYGKTGNFDGCLNVYEEMKALGAKPNLVIYNTLLDAMGRAK 318

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK++++EM N
Sbjct: 319 RPWQAKNIFKEMTN 332


>ref|XP_003610579.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
           gi|355511634|gb|AES92776.1| pentatricopeptide (PPR)
           repeat protein [Medicago truncatula]
          Length = 706

 Score =  226 bits (575), Expect = 7e-57
 Identities = 102/134 (76%), Positives = 122/134 (91%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+TIISCAR C LP KA+E FE+M  FGC+PDDVTYS MID+YG+AGD+D AL+LYD
Sbjct: 216 NVTFSTIISCARSCYLPDKAVEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYD 275

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRI+  TF+TLI++YG++GN+DG LNVYEEMKALGVKPNLVVYNTLLDAMGRAK
Sbjct: 276 RARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAK 335

Query: 43  RPWQAKSVYREMIN 2
           RPWQA+++Y+EMIN
Sbjct: 336 RPWQARTIYKEMIN 349


>ref|XP_010542188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Tarenaya hassleriana]
          Length = 705

 Score =  225 bits (574), Expect = 9e-57
 Identities = 104/134 (77%), Positives = 121/134 (90%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N TFTT+ISCAR C LP +A+E FE+M  FGC+PDDVT+SAMIDAYGRAG+VD ALSLYD
Sbjct: 215 NATFTTLISCARQCALPGRAVEWFEKMPNFGCEPDDVTFSAMIDAYGRAGNVDMALSLYD 274

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR EKWRID VTF+TLIRIYG+SGN+DG LN+YEEMKALGV+PNLVVYN LLDAMGRAK
Sbjct: 275 RARTEKWRIDPVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVRPNLVVYNRLLDAMGRAK 334

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK +Y+++I+
Sbjct: 335 RPWQAKIIYKDLIS 348


>ref|XP_008224621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Prunus mume]
          Length = 706

 Score =  224 bits (572), Expect = 1e-56
 Identities = 105/134 (78%), Positives = 118/134 (88%)
 Frame = -1

Query: 403 NITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLYD 224
           N+TF+T+ISCARM +LP KA+E FE+M  FGC PDDVTYSAMIDAYGR+G VD A SLYD
Sbjct: 216 NVTFSTMISCARMSSLPDKAVEWFEKMPSFGCNPDDVTYSAMIDAYGRSGKVDMAFSLYD 275

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
           RAR  KWRID VTF+TLI+I+G SGNFDG LNVYEEMKA+G KPNLV+YNTLLDAMGRAK
Sbjct: 276 RARTSKWRIDPVTFSTLIKIHGQSGNFDGCLNVYEEMKAIGAKPNLVIYNTLLDAMGRAK 335

Query: 43  RPWQAKSVYREMIN 2
           RPWQAK +YREMIN
Sbjct: 336 RPWQAKKIYREMIN 349



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 31/133 (23%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
 Frame = -1

Query: 400 ITFTTIISCARMCNLPTKAIELFERMEEFGCKPDDVTYSAMIDAYGRAGDVDKALSLY-D 224
           +T+  ++           A+ ++  M+E G + + + Y+ ++      G  D+A+ ++ D
Sbjct: 357 VTYAALLRAYGRARYGDDALNIYREMKEKGMELNVILYNTLLAMCADVGYADEAVEIFKD 416

Query: 223 RARAEKWRIDLVTFATLIRIYGISGNFDGALNVYEEMKALGVKPNLVVYNTLLDAMGRAK 44
              +E W+ D  TF+++I IY  SG    A  +  EM   G +PN+ +  +L+   G+AK
Sbjct: 417 MKSSETWKPDSWTFSSMITIYSCSGKVTEAETMLNEMLEAGFQPNIFILTSLIQCYGKAK 476

Query: 43  RPWQAKSVYREMI 5
           R      ++ +++
Sbjct: 477 RTDDVVRIFNQLL 489