BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum23_contig00029359
         (319 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_040725246.1| ribonuclease HI [Thiomicrospira sp. Kp2]           76   1e-11
ref|WP_028986336.1| ribonuclease H [Thermicanus aegyptius]             74   4e-11
ref|WP_005927464.1| hypothetical protein [Bacteroides salyersiae...    74   4e-11
ref|WP_005588650.1| ribonuclease H [[Clostridium] ultunense] gi|...    74   4e-11
ref|WP_019556098.1| ribonuclease HI [Thiomicrospira arctica]           74   6e-11
gb|EKU90734.1| hypothetical protein HMPREF9447_02152 [Bacteroide...    72   1e-10
ref|WP_055293257.1| ribonuclease H [Bacteroides salyersiae] gi|9...    72   2e-10
ref|WP_029407439.1| ribonuclease HI [Thiomicrospira sp. Milos-T2]      72   2e-10
emb|CCY52721.1| uncharacterized protein BN523_00939 [Bacteroides...    72   2e-10
ref|WP_007479300.1| ribonuclease H [Bacteroides salyersiae] gi|3...    72   2e-10
ref|WP_054404325.1| ribonuclease H [Paenibacillus sp. FJAT-22460...    72   2e-10
ref|WP_053491384.1| ribonuclease H [Bacillus sp. FJAT-18019] gi|...    72   2e-10
ref|WP_036663765.1| ribonuclease H [Paenibacillus sp. FSL H8-457]      72   2e-10
ref|WP_015737567.1| ribonuclease H [Paenibacillus sp. Y412MC10] ...    72   2e-10
gb|ETT61623.1| ribonuclease H-like protein [Paenibacillus sp. FS...    72   2e-10
ref|WP_009589560.1| ribonuclease H [Paenibacillus sp. HGF5] gi|3...    72   2e-10
ref|WP_047910069.1| ribonuclease H [Paenibacillus sp. TCA20] gi|...    71   3e-10
ref|WP_018758608.1| ribonuclease H [Paenibacillus terrigena]           71   4e-10
ref|WP_007131775.1| ribonuclease H [Paenibacillus lactis] gi|353...    71   4e-10
ref|WP_050649457.1| ribonuclease HI [Vibrio sp. J2-4] gi|8578854...    70   5e-10

>ref|WP_040725246.1| ribonuclease HI [Thiomicrospira sp. Kp2]
          Length = 255

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVWAGR PGIYT WN+C+ QVD++ GA YKSF T  EAE+A+
Sbjct: 3   KKYYVVWAGRKPGIYTDWNSCKAQVDKFAGAKYKSFPTQAEAEQAF 48


>ref|WP_028986336.1| ribonuclease H [Thermicanus aegyptius]
          Length = 218

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +1

Query: 67  KYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           KYYVVW GR PGIYT W  C++Q+  +PGA YKSF T +EAERAY
Sbjct: 5   KYYVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAY 49


>ref|WP_005927464.1| hypothetical protein [Bacteroides salyersiae]
           gi|482602468|gb|EOA50617.1| hypothetical protein
           HMPREF1532_01670 [Bacteroides salyersiae WAL 10018 = DSM
           18765 = JCM 12988]
          Length = 211

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = +1

Query: 58  GMRKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAYY 204
           G +K+YVVW G  PGIYTSW  CQ Q   Y GA YKSF TY+EAERA++
Sbjct: 2   GKQKFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTYEEAERAFH 50


>ref|WP_005588650.1| ribonuclease H [[Clostridium] ultunense]
           gi|452990499|emb|CCQ98285.1| Ribonuclease H
           [[Clostridium] ultunense Esp]
          Length = 218

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +1

Query: 67  KYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           KYYVVW GR PGIYT W  C++Q+  +PGA YKSF T +EAERAY
Sbjct: 5   KYYVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAY 49


>ref|WP_019556098.1| ribonuclease HI [Thiomicrospira arctica]
          Length = 261

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +K+YVVW G+ PGIYT WN+C+ QVD++ GA YKSF T  EAE+AY
Sbjct: 3   KKFYVVWQGKVPGIYTDWNSCKSQVDKFAGAKYKSFPTLAEAEQAY 48


>gb|EKU90734.1| hypothetical protein HMPREF9447_02152 [Bacteroides oleiciplenus YIT
           12058]
          Length = 224

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 35/61 (57%), Positives = 41/61 (67%)
 Frame = +1

Query: 19  ALPPSPNTAVATSGMRKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERA 198
           ALP SP+      G  K+YVVWAG  PGIYTSW  CQ Q   Y GA YKSF+T +EAE+A
Sbjct: 7   ALPLSPDM-----GKEKFYVVWAGGNPGIYTSWTDCQLQTKGYEGAKYKSFETREEAEKA 61

Query: 199 Y 201
           +
Sbjct: 62  F 62


>ref|WP_055293257.1| ribonuclease H [Bacteroides salyersiae]
           gi|933275589|emb|CUM71186.1| Predicted double-stranded
           RNA/RNA-DNA hybrid binding protein [Bacteroides
           salyersiae]
          Length = 211

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +1

Query: 58  GMRKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAYY 204
           G +K+YVVW G  PGIYTSW  CQ Q   Y GA YKSF T++EAERA++
Sbjct: 2   GKQKFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTHEEAERAFH 50


>ref|WP_029407439.1| ribonuclease HI [Thiomicrospira sp. Milos-T2]
          Length = 266

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +K+YVVW GR PGIYT WN+C+ QVD++ GA YKSF T  EAE+A+
Sbjct: 3   KKFYVVWQGRQPGIYTDWNSCKAQVDKFAGAKYKSFPTKAEAEQAF 48


>emb|CCY52721.1| uncharacterized protein BN523_00939 [Bacteroides sp. CAG:189]
          Length = 211

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +1

Query: 58  GMRKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAYY 204
           G +K+YVVW G  PGIYTSW  CQ Q   Y GA YKSF T++EAERA++
Sbjct: 2   GKQKFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTHEEAERAFH 50


>ref|WP_007479300.1| ribonuclease H [Bacteroides salyersiae] gi|392673207|gb|EIY66670.1|
           hypothetical protein HMPREF1071_01431 [Bacteroides
           salyersiae CL02T12C01]
          Length = 211

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 36/49 (73%)
 Frame = +1

Query: 58  GMRKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAYY 204
           G +K+YVVW G  PGIYTSW  CQ Q   Y GA YKSF T++EAERA++
Sbjct: 2   GKQKFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTHEEAERAFH 50


>ref|WP_054404325.1| ribonuclease H [Paenibacillus sp. FJAT-22460]
           gi|924308250|gb|KOR81994.1| ribonuclease H
           [Paenibacillus sp. FJAT-22460]
          Length = 220

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW G+ PGIYTSW  CQQQV+++ GA +K+F++  EAE+AY
Sbjct: 4   QKYYVVWVGKVPGIYTSWGECQQQVNQFAGAKFKAFESRSEAEQAY 49


>ref|WP_053491384.1| ribonuclease H [Bacillus sp. FJAT-18019]
           gi|923173464|gb|KOP66403.1| ribonuclease H [Bacillus sp.
           FJAT-18019]
          Length = 220

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW G+ PGIYTSW  CQQQV+++ GA +K+F++  EAE+AY
Sbjct: 4   QKYYVVWVGKVPGIYTSWGECQQQVNQFAGAKFKAFESRSEAEQAY 49


>ref|WP_036663765.1| ribonuclease H [Paenibacillus sp. FSL H8-457]
          Length = 221

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW G+ PGIYTSW  CQQQV+++ GA +K+F++  EAE+AY
Sbjct: 4   QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 49


>ref|WP_015737567.1| ribonuclease H [Paenibacillus sp. Y412MC10]
           gi|261285892|gb|ACX67863.1| ribonuclease H-related
           protein [Paenibacillus sp. Y412MC10]
          Length = 221

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW G+ PGIYTSW  CQQQV+++ GA +K+F++  EAE+AY
Sbjct: 4   QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 49


>gb|ETT61623.1| ribonuclease H-like protein [Paenibacillus sp. FSL H8-457]
          Length = 222

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW G+ PGIYTSW  CQQQV+++ GA +K+F++  EAE+AY
Sbjct: 5   QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 50


>ref|WP_009589560.1| ribonuclease H [Paenibacillus sp. HGF5] gi|328942126|gb|EGG38408.1|
           ribonuclease H [Paenibacillus sp. HGF5]
          Length = 221

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW G+ PGIYTSW  CQQQV+++ GA +K+F++  EAE+AY
Sbjct: 4   QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 49


>ref|WP_047910069.1| ribonuclease H [Paenibacillus sp. TCA20]
           gi|665416311|dbj|GAK38914.1| putative ribonuclease
           [Paenibacillus sp. TCA20]
          Length = 215

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW G+ PGIYTSW ACQQQV+   GA YK+F++  EAE+AY
Sbjct: 4   QKYYVVWEGKTPGIYTSWPACQQQVNGVTGAKYKAFESRAEAEKAY 49


>ref|WP_018758608.1| ribonuclease H [Paenibacillus terrigena]
          Length = 219

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVWAG+ PGIY +W  CQ+QV+++P A YKS++T  EAE+AY
Sbjct: 4   QKYYVVWAGKKPGIYKTWPECQEQVNQFPQAKYKSYETLAEAEKAY 49


>ref|WP_007131775.1| ribonuclease H [Paenibacillus lactis] gi|353194141|gb|EHB59644.1|
           ribonuclease H-related protein [Paenibacillus lactis
           154]
          Length = 222

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 28/46 (60%), Positives = 38/46 (82%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW G+ PGIYTSW  CQQQV++Y GA +K+F++  EAE+A+
Sbjct: 4   QKYYVVWVGKVPGIYTSWAECQQQVNQYTGAKFKAFESRSEAEQAF 49


>ref|WP_050649457.1| ribonuclease HI [Vibrio sp. J2-4] gi|857885468|emb|CDT67923.1|
           Ribonuclease HI [Vibrio sp. J2-4]
          Length = 257

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +1

Query: 64  RKYYVVWAGRAPGIYTSWNACQQQVDRYPGASYKSFQTYQEAERAY 201
           +KYYVVW GR PGI+T+WN C+ QVD + GA YKSF T  EAE A+
Sbjct: 3   KKYYVVWKGRTPGIFTTWNECKSQVDGFAGARYKSFPTLDEAESAF 48