BLASTX nr result
ID: Aconitum23_contig00029246
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum23_contig00029246
(409 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 213 3e-53
ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV a... 210 3e-52
ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV a... 209 6e-52
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 207 3e-51
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a... 207 3e-51
gb|KDO52429.1| hypothetical protein CISIN_1g001050mg [Citrus sin... 205 9e-51
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 205 9e-51
ref|XP_008220676.1| PREDICTED: DNA-directed RNA polymerases IV a... 204 2e-50
ref|XP_008220675.1| PREDICTED: DNA-directed RNA polymerases IV a... 204 2e-50
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerases IV a... 204 2e-50
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun... 204 2e-50
ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV a... 204 3e-50
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 203 5e-50
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a... 202 1e-49
ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV a... 202 1e-49
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a... 202 1e-49
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerases IV a... 201 1e-49
ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV a... 201 2e-49
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 201 2e-49
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 201 2e-49
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron
macrophyllum]
Length = 1019
Score = 213 bits (543), Expect = 3e-53
Identities = 98/133 (73%), Positives = 117/133 (87%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RMV+A+++DLYG R +H I +YLD SI+TNGLSRAF+TGAW+H +KK ++SGVVATLRR
Sbjct: 260 RMVKAMQRDLYGERVIHAIEHYLDASIITNGLSRAFSTGAWSHPYKKMERISGVVATLRR 319
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQTIADMR T QQV+YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA+TGLV
Sbjct: 320 TNPLQTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLAITGLV 379
Query: 47 STNLMEPLRNKLL 9
STN+ E +KLL
Sbjct: 380 STNIEEHFLDKLL 392
>ref|XP_010275247.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Nelumbo nucifera]
Length = 1201
Score = 210 bits (535), Expect = 3e-52
Identities = 98/135 (72%), Positives = 115/135 (85%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +A++KDLYG R++HPI +YLD SI+TNGL+RAF+TGAW+H F ++SGVVATLRR
Sbjct: 440 RMTKAMQKDLYGDRALHPIEHYLDASIITNGLTRAFSTGAWSHPFNTGERLSGVVATLRR 499
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQ ADMR T QQV YTGK G ARFP+PSHWG+LCFLSTPDGENCGLVKNLA+TGLV
Sbjct: 500 TNPLQMTADMRKTRQQVQYTGKVGDARFPNPSHWGKLCFLSTPDGENCGLVKNLAITGLV 559
Query: 47 STNLMEPLRNKLLKC 3
STN +EPL + LL C
Sbjct: 560 STNSVEPLLDILLNC 574
>ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Jatropha curcas] gi|802626342|ref|XP_012076430.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Jatropha curcas] gi|643724314|gb|KDP33515.1|
hypothetical protein JCGZ_07086 [Jatropha curcas]
Length = 1209
Score = 209 bits (532), Expect = 6e-52
Identities = 97/135 (71%), Positives = 113/135 (83%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL+KDLYG R V PI +YLD SIVTNGLSRAF+TGAW+H FK+ ++SGVVA L R
Sbjct: 450 RMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFSTGAWSHPFKRMERISGVVANLGR 509
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQT+ D+R T QQV YTGK G AR+PHPSHWGR+CFLSTPDGENCGLVKNLA+TGLV
Sbjct: 510 TNPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAITGLV 569
Query: 47 STNLMEPLRNKLLKC 3
ST ++EPL + L C
Sbjct: 570 STEILEPLIDILFDC 584
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 207 bits (526), Expect = 3e-51
Identities = 94/135 (69%), Positives = 114/135 (84%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RMV+A++++LYG R + PI YLD SI+TNGLSRAF+TG W+H FK+ ++SGVVATLRR
Sbjct: 476 RMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRR 535
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQ ADMR T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA+TGLV
Sbjct: 536 TNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLV 595
Query: 47 STNLMEPLRNKLLKC 3
ST +++PL +KL C
Sbjct: 596 STEVLDPLVDKLFDC 610
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Vitis vinifera] gi|731386102|ref|XP_010648748.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Vitis vinifera]
Length = 1198
Score = 207 bits (526), Expect = 3e-51
Identities = 94/135 (69%), Positives = 114/135 (84%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RMV+A++++LYG R + PI YLD SI+TNGLSRAF+TG W+H FK+ ++SGVVATLRR
Sbjct: 440 RMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRR 499
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQ ADMR T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA+TGLV
Sbjct: 500 TNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLV 559
Query: 47 STNLMEPLRNKLLKC 3
ST +++PL +KL C
Sbjct: 560 STEVLDPLVDKLFDC 574
>gb|KDO52429.1| hypothetical protein CISIN_1g001050mg [Citrus sinensis]
Length = 1173
Score = 205 bits (522), Expect = 9e-51
Identities = 92/132 (69%), Positives = 113/132 (85%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R+V PI YYLD SI+TNGLSRAF+TGAW+H FK+T ++SG+VA L R
Sbjct: 410 RMAKALQRDLYGDRTVRPIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGR 469
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+ D+R T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNL VTGLV
Sbjct: 470 ANPLQTLVDLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLV 529
Query: 47 STNLMEPLRNKL 12
ST+++EP+ +L
Sbjct: 530 STSILEPIFEQL 541
>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Citrus
sinensis] gi|557545145|gb|ESR56123.1| hypothetical
protein CICLE_v10018562mg [Citrus clementina]
Length = 1198
Score = 205 bits (522), Expect = 9e-51
Identities = 92/132 (69%), Positives = 113/132 (85%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R+V PI YYLD SI+TNGLSRAF+TGAW+H FK+T ++SG+VA L R
Sbjct: 435 RMAKALQRDLYGDRTVRPIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGR 494
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+ D+R T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNL VTGLV
Sbjct: 495 ANPLQTLVDLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLV 554
Query: 47 STNLMEPLRNKL 12
ST+++EP+ +L
Sbjct: 555 STSILEPIFEQL 566
>ref|XP_008220676.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
isoform X2 [Prunus mume]
Length = 1200
Score = 204 bits (520), Expect = 2e-50
Identities = 95/135 (70%), Positives = 113/135 (83%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R+V PI +YLD SIVTNG+SRAF+TGAW H FK+ ++SGVVAT+ R
Sbjct: 444 RMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGR 503
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+ DMR T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA TGLV
Sbjct: 504 ANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLV 563
Query: 47 STNLMEPLRNKLLKC 3
STN++E L +LL C
Sbjct: 564 STNVLESLIPQLLTC 578
>ref|XP_008220675.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
isoform X1 [Prunus mume]
Length = 1212
Score = 204 bits (520), Expect = 2e-50
Identities = 95/135 (70%), Positives = 113/135 (83%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R+V PI +YLD SIVTNG+SRAF+TGAW H FK+ ++SGVVAT+ R
Sbjct: 444 RMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGR 503
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+ DMR T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA TGLV
Sbjct: 504 ANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLV 563
Query: 47 STNLMEPLRNKLLKC 3
STN++E L +LL C
Sbjct: 564 STNVLESLIPQLLTC 578
>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Cicer arietinum]
Length = 1199
Score = 204 bits (520), Expect = 2e-50
Identities = 93/135 (68%), Positives = 113/135 (83%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R VH I +YLD SI+TNGL RAF+TGAWTH +K+ ++SGVVATL R
Sbjct: 442 RMAKALQRDLYGDRDVHQIEHYLDASIITNGLQRAFSTGAWTHPYKRMERISGVVATLGR 501
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQT+A++R T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKN+AVTGLV
Sbjct: 502 TNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLV 561
Query: 47 STNLMEPLRNKLLKC 3
STN+ E + +L C
Sbjct: 562 STNVTESILPQLFAC 576
>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
gi|462422378|gb|EMJ26641.1| hypothetical protein
PRUPE_ppa000410mg [Prunus persica]
Length = 1200
Score = 204 bits (520), Expect = 2e-50
Identities = 95/135 (70%), Positives = 113/135 (83%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R+V PI +YLD SIVTNG+SRAF+TGAW H FK+ ++SGVVAT+ R
Sbjct: 444 RMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGR 503
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+ DMR T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA TGLV
Sbjct: 504 ANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLV 563
Query: 47 STNLMEPLRNKLLKC 3
STN++E L +LL C
Sbjct: 564 STNVLESLIPQLLTC 578
>ref|XP_009413518.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Musa acuminata subsp. malaccensis]
gi|695051016|ref|XP_009413519.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Musa acuminata
subsp. malaccensis]
Length = 1198
Score = 204 bits (518), Expect = 3e-50
Identities = 93/135 (68%), Positives = 116/135 (85%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RMVRA+++DL G R + PI YLD SI+TNGL+RAF+TGAWTH +KKT ++SG+VATLRR
Sbjct: 440 RMVRAMQRDLSGDRDLQPIERYLDASIITNGLNRAFSTGAWTHPYKKTERLSGIVATLRR 499
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQ ++DMR T QQVAY GK G AR+P+PS+WG+LCFLSTPDGENCGLVKNLAVT +V
Sbjct: 500 TNPLQMMSDMRKTRQQVAYAGKAGDARYPNPSYWGKLCFLSTPDGENCGLVKNLAVTAVV 559
Query: 47 STNLMEPLRNKLLKC 3
S+ +MEP+ +KL+ C
Sbjct: 560 SSKIMEPILDKLIAC 574
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 203 bits (516), Expect = 5e-50
Identities = 94/133 (70%), Positives = 110/133 (82%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL+KDLYG R V PI +YLD SIVTNGLSRAF+TGAW+H +K+ ++SGVVA L R
Sbjct: 444 RMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGR 503
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+ D+R T V YTGK G ARFPHPSHWGR+CFLSTPDGENCGLVKNLA TGLV
Sbjct: 504 ANPLQTMVDLRKTRYHVQYTGKVGDARFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLV 563
Query: 47 STNLMEPLRNKLL 9
S N++EPL +KL+
Sbjct: 564 SVNILEPLIDKLI 576
>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform
X2 [Nicotiana sylvestris]
Length = 1216
Score = 202 bits (513), Expect = 1e-49
Identities = 92/135 (68%), Positives = 111/135 (82%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM++A+++DLYG R V PI +YLD SI+TNGLSRAF+TG W H +K+ +VSGVVAT+RR
Sbjct: 458 RMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRR 517
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQ ADMR T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA GLV
Sbjct: 518 TNPLQMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLV 577
Query: 47 STNLMEPLRNKLLKC 3
ST +++PL L +C
Sbjct: 578 STTILKPLLETLYRC 592
>ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform
X1 [Nicotiana sylvestris]
Length = 1226
Score = 202 bits (513), Expect = 1e-49
Identities = 92/135 (68%), Positives = 111/135 (82%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM++A+++DLYG R V PI +YLD SI+TNGLSRAF+TG W H +K+ +VSGVVAT+RR
Sbjct: 468 RMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRR 527
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQ ADMR T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA GLV
Sbjct: 528 TNPLQMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLV 587
Query: 47 STNLMEPLRNKLLKC 3
ST +++PL L +C
Sbjct: 588 STTILKPLLETLYRC 602
>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana tomentosiformis]
Length = 1220
Score = 202 bits (513), Expect = 1e-49
Identities = 92/135 (68%), Positives = 111/135 (82%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM++A+++DLYG R V PI +YLD SI+TNGLSRAF+TG W H +K+ +VSGVVAT+RR
Sbjct: 462 RMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRR 521
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQ ADMR T QQV YTGK G AR+PHPSHWG++CFLSTPDGENCGLVKNLA GLV
Sbjct: 522 TNPLQMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLV 581
Query: 47 STNLMEPLRNKLLKC 3
ST +++PL L +C
Sbjct: 582 STTILKPLLETLYRC 596
>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Cucumis
sativus] gi|700200271|gb|KGN55429.1| hypothetical
protein Csa_4G651950 [Cucumis sativus]
Length = 1197
Score = 201 bits (512), Expect = 1e-49
Identities = 92/135 (68%), Positives = 111/135 (82%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R VHPI +YLD SI+TNGLSRAF+TGAW H FK+ ++SGVVATL R
Sbjct: 441 RMEKALQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGR 500
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+A++R T QQVAYTGK G AR+PHPSHWGR+CFLSTPDGENCGL+KNL+ TGLV
Sbjct: 501 ANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLV 560
Query: 47 STNLMEPLRNKLLKC 3
S N + + L +C
Sbjct: 561 SLNTKKSITPTLFRC 575
>ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Populus euphratica]
Length = 1190
Score = 201 bits (511), Expect = 2e-49
Identities = 95/132 (71%), Positives = 109/132 (82%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R VHPI +YLD SIVTNGL+RAF+TGAW H FK +VSGVV L R
Sbjct: 431 RMTKALQRDLYGDRDVHPIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGR 490
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+ D+R T QQV YTGK G AR+PHPSHWGR+CFLSTPDGENCGLVKNLAVTG+V
Sbjct: 491 ANPLQTMIDLRKTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVV 550
Query: 47 STNLMEPLRNKL 12
STN+ E L +KL
Sbjct: 551 STNISESLVDKL 562
>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1217
Score = 201 bits (511), Expect = 2e-49
Identities = 93/135 (68%), Positives = 110/135 (81%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RMV+A+++DLYG R V PI +YLD SI+TNGLSRAF+TG W H +K+ +VSGVVATLRR
Sbjct: 459 RMVKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRR 518
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
TNPLQ ADMR + QQV YTGK G AR+PHPSHWG+LCFLSTPDGENCGLVKNLA GLV
Sbjct: 519 TNPLQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLV 578
Query: 47 STNLMEPLRNKLLKC 3
ST +++P L +C
Sbjct: 579 STIILKPFLETLFRC 593
>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1181
Score = 201 bits (511), Expect = 2e-49
Identities = 95/132 (71%), Positives = 109/132 (82%)
Frame = -3
Query: 407 RMVRALKKDLYGSRSVHPINYYLDESIVTNGLSRAFTTGAWTHNFKKTVKVSGVVATLRR 228
RM +AL++DLYG R VHPI +YLD SIVTNGL+RAF+TGAW H FK +VSGVV L R
Sbjct: 433 RMTKALQRDLYGDRDVHPIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGR 492
Query: 227 TNPLQTIADMR*THQQVAYTGKTGGARFPHPSHWGRLCFLSTPDGENCGLVKNLAVTGLV 48
NPLQT+ D+R T QQV YTGK G AR+PHPSHWGR+CFLSTPDGENCGLVKNLAVTG+V
Sbjct: 493 ANPLQTMIDLRKTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVV 552
Query: 47 STNLMEPLRNKL 12
STN+ E L +KL
Sbjct: 553 STNISESLVDKL 564